Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | enrichment_ubiquitous somatic cells ant follicle cells interfollicular stalk cells oocyte post follicle cells |
| stage8 |  s
 s
 s
 s
 s | germline cells_ubiquitous post follicle cells oocyte cytoplasmic foci somatic cells ant follicle cells |
| stage9 |  s
 s
 s
 s
 s | follicle cells germline cells_ubiquitous follicle cells_ubiquitous somatic cells |
| stage10 |  s
 s
 s
 s
 s
 s | somatic cells follicle cells_ubiquitous follicle cells germline cells_ubiquitous |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Medium expression (21-40ms exp) Stage 1-3 Localized Exclusionary patterns Yolk cortex exclusion Expressed Annotated by Eric Embryonic localization patterns Maternal |
| stage4-5 | 
 | Degraded Degraded completely stage 5 Nuclei-associated localization Expressed Intranuclear accumulation Subcellular localization patterns Blastoderm nuclei Zygotic Accumlation in subset nuclei Stage 4-5 Degradation maternal transcripts Accumlation entire nucleus Localized Subset blastoderm nuclei Perinuclear subset of nuclei Degraded partially stage 4 vent blastoderm nuclei Pole cell exclusion Apical exclusion post blastoderm nuclei Exclusionary patterns Perinuclear localization Perinuclear around blastoderm nuclei Local terms for zyg transcripts Embryonic localization patterns Maternal |
| stage6-7 | 
 | Zygotic Accumlation in subset nuclei Blastoderm nuclei Subcellular localization patterns Local terms for zyg transcripts Stage 6-7 Nuclei-associated localization vent blastoderm nuclei Expressed post blastoderm nuclei Intranuclear accumulation Accumlation entire nucleus Localized Subset blastoderm nuclei |
| stage8-9 | 
 | Local terms for zyg transcripts Subcellular localization patterns Blastoderm nuclei Zygotic Accumlation in subset nuclei Subset blastoderm nuclei Localized Accumlation entire nucleus Segmented pattern Intranuclear accumulation Stage 8-9 Expressed Nuclei-associated localization |
| stage10- | 
 | Expressed Brain Localized Head Zygotic Blastoderm nuclei Stage 10- Subcellular localization patterns CNS Sensory sys vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | list_4-6:specific gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap list_7-8:specific vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||