Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | oocyte post follicle cells somatic cells enrichment_ubiquitous ant follicle cells interfollicular stalk cells |
| stage8 |  s
 s
 s
 s
 s | cytoplasmic foci ant follicle cells germline cells_ubiquitous oocyte post follicle cells somatic cells |
| stage9 |  s
 s
 s
 s
 s | follicle cells follicle cells_ubiquitous germline cells_ubiquitous somatic cells |
| stage10 |  s
 s
 s
 s
 s
 s | follicle cells germline cells_ubiquitous follicle cells_ubiquitous somatic cells |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Annotated by Eric Exclusionary patterns Embryonic localization patterns Expressed Stage 1-3 Yolk cortex exclusion Medium expression (21-40ms exp) Localized Maternal |
| stage4-5 | 
 | Subcellular localization patterns Perinuclear around blastoderm nuclei Expressed Nuclei-associated localization vent blastoderm nuclei Apical exclusion Degraded completely stage 5 Stage 4-5 Zygotic Embryonic localization patterns Blastoderm nuclei post blastoderm nuclei Intranuclear accumulation Localized Pole cell exclusion Subset blastoderm nuclei Degraded Accumlation in subset nuclei Perinuclear subset of nuclei Exclusionary patterns Degraded partially stage 4 Local terms for zyg transcripts Accumlation entire nucleus Degradation maternal transcripts Perinuclear localization Maternal |
| stage6-7 | 
 | Zygotic Local terms for zyg transcripts Accumlation entire nucleus Blastoderm nuclei post blastoderm nuclei Subcellular localization patterns Stage 6-7 Expressed vent blastoderm nuclei Intranuclear accumulation Nuclei-associated localization Subset blastoderm nuclei Accumlation in subset nuclei Localized |
| stage8-9 | 
 | Subset blastoderm nuclei Accumlation in subset nuclei Localized Intranuclear accumulation Nuclei-associated localization Expressed Subcellular localization patterns Stage 8-9 Blastoderm nuclei Accumlation entire nucleus Local terms for zyg transcripts Zygotic Segmented pattern |
| stage10- | 
 | Zygotic Brain Blastoderm nuclei CNS Head Expressed Subcellular localization patterns Localized Stage 10- Sensory sys vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | gap list_4-6:specific faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap list_7-8:specific vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||