Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | interfollicular stalk cells ant follicle cells enrichment_ubiquitous somatic cells oocyte post follicle cells |
| stage8 |  s
 s
 s
 s
 s | ant follicle cells cytoplasmic foci post follicle cells somatic cells germline cells_ubiquitous oocyte |
| stage9 |  s
 s
 s
 s
 s | somatic cells germline cells_ubiquitous follicle cells follicle cells_ubiquitous |
| stage10 |  s
 s
 s
 s
 s
 s | follicle cells germline cells_ubiquitous somatic cells follicle cells_ubiquitous |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Medium expression (21-40ms exp) Localized Stage 1-3 Embryonic localization patterns Yolk cortex exclusion Annotated by Eric Exclusionary patterns Expressed Maternal |
| stage4-5 | 
 | Intranuclear accumulation Degraded completely stage 5 Local terms for zyg transcripts Embryonic localization patterns Accumlation in subset nuclei Apical exclusion Blastoderm nuclei Stage 4-5 Degradation maternal transcripts Degraded partially stage 4 Perinuclear subset of nuclei post blastoderm nuclei Nuclei-associated localization Subcellular localization patterns vent blastoderm nuclei Perinuclear around blastoderm nuclei Degraded Perinuclear localization Pole cell exclusion Expressed Exclusionary patterns Accumlation entire nucleus Localized Zygotic Subset blastoderm nuclei Maternal |
| stage6-7 | 
 | Subset blastoderm nuclei Zygotic vent blastoderm nuclei Nuclei-associated localization Subcellular localization patterns post blastoderm nuclei Localized Accumlation entire nucleus Expressed Stage 6-7 Blastoderm nuclei Accumlation in subset nuclei Local terms for zyg transcripts Intranuclear accumulation |
| stage8-9 | 
 | Segmented pattern Zygotic Stage 8-9 Subset blastoderm nuclei Accumlation entire nucleus Localized Subcellular localization patterns Nuclei-associated localization Expressed Intranuclear accumulation Accumlation in subset nuclei Local terms for zyg transcripts Blastoderm nuclei |
| stage10- | 
 | Zygotic Head CNS Brain Subcellular localization patterns Localized Stage 10- Sensory sys Expressed Blastoderm nuclei vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | faint ubiquitous list_4-6:specific gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | list_7-8:specific gap vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||