Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | enrichment_ubiquitous ant follicle cells interfollicular stalk cells post follicle cells somatic cells oocyte |
| stage8 |  s
 s
 s
 s
 s | germline cells_ubiquitous cytoplasmic foci ant follicle cells post follicle cells somatic cells oocyte |
| stage9 |  s
 s
 s
 s
 s | somatic cells follicle cells_ubiquitous follicle cells germline cells_ubiquitous |
| stage10 |  s
 s
 s
 s
 s
 s | follicle cells somatic cells follicle cells_ubiquitous germline cells_ubiquitous |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Exclusionary patterns Yolk cortex exclusion Annotated by Eric Embryonic localization patterns Expressed Stage 1-3 Medium expression (21-40ms exp) Localized Maternal |
| stage4-5 | 
 | Zygotic Perinuclear around blastoderm nuclei Intranuclear accumulation Degradation maternal transcripts Blastoderm nuclei Localized Expressed Embryonic localization patterns Nuclei-associated localization Subcellular localization patterns Local terms for zyg transcripts Stage 4-5 Perinuclear subset of nuclei Accumlation in subset nuclei Perinuclear localization Degraded Subset blastoderm nuclei Pole cell exclusion Degraded partially stage 4 Apical exclusion post blastoderm nuclei vent blastoderm nuclei Degraded completely stage 5 Exclusionary patterns Accumlation entire nucleus Maternal |
| stage6-7 | 
 | Expressed Nuclei-associated localization Zygotic Intranuclear accumulation Subset blastoderm nuclei Blastoderm nuclei Localized Subcellular localization patterns Local terms for zyg transcripts Accumlation in subset nuclei Accumlation entire nucleus Stage 6-7 vent blastoderm nuclei post blastoderm nuclei |
| stage8-9 | 
 | Blastoderm nuclei Localized Zygotic Intranuclear accumulation Subset blastoderm nuclei Nuclei-associated localization Expressed Stage 8-9 Segmented pattern Accumlation in subset nuclei Accumlation entire nucleus Subcellular localization patterns Local terms for zyg transcripts |
| stage10- | 
 | CNS Subcellular localization patterns Stage 10- Zygotic Sensory sys Brain Blastoderm nuclei Localized Head Expressed vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | list_4-6:specific gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap vent nerve cord A list_7-8:specific vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||