Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | interfollicular stalk cells oocyte post follicle cells somatic cells ant follicle cells enrichment_ubiquitous |
| stage8 |  s
 s
 s
 s
 s | ant follicle cells cytoplasmic foci germline cells_ubiquitous post follicle cells oocyte somatic cells |
| stage9 |  s
 s
 s
 s
 s | follicle cells_ubiquitous follicle cells germline cells_ubiquitous somatic cells |
| stage10 |  s
 s
 s
 s
 s
 s | follicle cells_ubiquitous follicle cells somatic cells germline cells_ubiquitous |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Expressed Medium expression (21-40ms exp) Stage 1-3 Embryonic localization patterns Yolk cortex exclusion Annotated by Eric Localized Exclusionary patterns Maternal |
| stage4-5 | 
 | Intranuclear accumulation Perinuclear localization Subcellular localization patterns Embryonic localization patterns Nuclei-associated localization Perinuclear around blastoderm nuclei Exclusionary patterns Blastoderm nuclei Degraded completely stage 5 Stage 4-5 Accumlation entire nucleus Subset blastoderm nuclei vent blastoderm nuclei Apical exclusion Perinuclear subset of nuclei post blastoderm nuclei Pole cell exclusion Degraded Expressed Zygotic Localized Degradation maternal transcripts Accumlation in subset nuclei Degraded partially stage 4 Local terms for zyg transcripts Maternal |
| stage6-7 | 
 | Stage 6-7 Accumlation entire nucleus Subset blastoderm nuclei Local terms for zyg transcripts Blastoderm nuclei Nuclei-associated localization Subcellular localization patterns Accumlation in subset nuclei Localized Zygotic Intranuclear accumulation Expressed post blastoderm nuclei vent blastoderm nuclei |
| stage8-9 | 
 | Segmented pattern Expressed Intranuclear accumulation Zygotic Accumlation in subset nuclei Subcellular localization patterns Localized Nuclei-associated localization Stage 8-9 Subset blastoderm nuclei Accumlation entire nucleus Blastoderm nuclei Local terms for zyg transcripts |
| stage10- | 
 | Subcellular localization patterns Head Localized Zygotic Expressed Sensory sys Stage 10- CNS Blastoderm nuclei Brain vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | gap list_4-6:specific faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | list_7-8:specific gap vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||