Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | ant follicle cells interfollicular stalk cells enrichment_ubiquitous post follicle cells oocyte somatic cells |
| stage8 |  s
 s
 s
 s
 s | somatic cells oocyte post follicle cells cytoplasmic foci ant follicle cells germline cells_ubiquitous |
| stage9 |  s
 s
 s
 s
 s | follicle cells follicle cells_ubiquitous germline cells_ubiquitous somatic cells |
| stage10 |  s
 s
 s
 s
 s
 s | follicle cells_ubiquitous follicle cells germline cells_ubiquitous somatic cells |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Annotated by Eric Yolk cortex exclusion Localized Exclusionary patterns Embryonic localization patterns Medium expression (21-40ms exp) Stage 1-3 Expressed Maternal |
| stage4-5 | 
 | Degraded Local terms for zyg transcripts Apical exclusion Embryonic localization patterns Perinuclear localization Expressed Intranuclear accumulation Accumlation in subset nuclei Pole cell exclusion Perinuclear around blastoderm nuclei Degraded completely stage 5 Accumlation entire nucleus Subcellular localization patterns Exclusionary patterns vent blastoderm nuclei Stage 4-5 Degraded partially stage 4 Subset blastoderm nuclei Blastoderm nuclei Perinuclear subset of nuclei Degradation maternal transcripts post blastoderm nuclei Nuclei-associated localization Zygotic Localized Maternal |
| stage6-7 | 
 | Accumlation entire nucleus Nuclei-associated localization Zygotic post blastoderm nuclei Stage 6-7 Localized Subcellular localization patterns vent blastoderm nuclei Blastoderm nuclei Intranuclear accumulation Expressed Accumlation in subset nuclei Subset blastoderm nuclei Local terms for zyg transcripts |
| stage8-9 | 
 | Intranuclear accumulation Expressed Accumlation in subset nuclei Subset blastoderm nuclei Segmented pattern Local terms for zyg transcripts Stage 8-9 Accumlation entire nucleus Zygotic Nuclei-associated localization Localized Subcellular localization patterns Blastoderm nuclei |
| stage10- | 
 | Brain Expressed Head CNS Zygotic Localized Subcellular localization patterns Blastoderm nuclei Sensory sys Stage 10- vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | faint ubiquitous list_4-6:specific gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap list_7-8:specific vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||