Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | somatic cells ant follicle cells post follicle cells oocyte interfollicular stalk cells enrichment_ubiquitous |
| stage8 |  s
 s
 s
 s
 s | somatic cells ant follicle cells cytoplasmic foci germline cells_ubiquitous post follicle cells oocyte |
| stage9 |  s
 s
 s
 s
 s | somatic cells germline cells_ubiquitous follicle cells_ubiquitous follicle cells |
| stage10 |  s
 s
 s
 s
 s
 s | follicle cells_ubiquitous germline cells_ubiquitous somatic cells follicle cells |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Medium expression (21-40ms exp) Exclusionary patterns Localized Embryonic localization patterns Yolk cortex exclusion Stage 1-3 Annotated by Eric Expressed Maternal |
| stage4-5 | 
 | vent blastoderm nuclei Exclusionary patterns Degradation maternal transcripts Stage 4-5 Perinuclear subset of nuclei Subcellular localization patterns Blastoderm nuclei Degraded Expressed Accumlation in subset nuclei Zygotic Nuclei-associated localization Intranuclear accumulation Perinuclear localization Accumlation entire nucleus Embryonic localization patterns Degraded completely stage 5 Localized Local terms for zyg transcripts Subset blastoderm nuclei Apical exclusion Perinuclear around blastoderm nuclei Pole cell exclusion post blastoderm nuclei Degraded partially stage 4 Maternal |
| stage6-7 | 
 | post blastoderm nuclei Expressed Intranuclear accumulation Accumlation entire nucleus Nuclei-associated localization Accumlation in subset nuclei Zygotic Stage 6-7 Subset blastoderm nuclei Local terms for zyg transcripts Localized vent blastoderm nuclei Blastoderm nuclei Subcellular localization patterns |
| stage8-9 | 
 | Blastoderm nuclei Segmented pattern Subcellular localization patterns Subset blastoderm nuclei Local terms for zyg transcripts Localized Accumlation entire nucleus Intranuclear accumulation Stage 8-9 Nuclei-associated localization Accumlation in subset nuclei Zygotic Expressed |
| stage10- | 
 | Brain Localized Subcellular localization patterns Stage 10- CNS Blastoderm nuclei Head Sensory sys Expressed Zygotic vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | list_4-6:specific faint ubiquitous gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | list_7-8:specific vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | faint ubiquitous gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||