Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | interfollicular stalk cells enrichment_ubiquitous somatic cells ant follicle cells post follicle cells oocyte |
| stage8 |  s
 s
 s
 s
 s | oocyte germline cells_ubiquitous cytoplasmic foci ant follicle cells post follicle cells somatic cells |
| stage9 |  s
 s
 s
 s
 s | somatic cells follicle cells_ubiquitous follicle cells germline cells_ubiquitous |
| stage10 |  s
 s
 s
 s
 s
 s | germline cells_ubiquitous follicle cells_ubiquitous follicle cells somatic cells |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Exclusionary patterns Medium expression (21-40ms exp) Embryonic localization patterns Stage 1-3 Localized Annotated by Eric Yolk cortex exclusion Expressed Maternal |
| stage4-5 | 
 | Exclusionary patterns Perinuclear subset of nuclei Zygotic Degradation maternal transcripts Stage 4-5 Local terms for zyg transcripts Blastoderm nuclei post blastoderm nuclei Perinuclear localization Subset blastoderm nuclei Apical exclusion vent blastoderm nuclei Accumlation in subset nuclei Localized Nuclei-associated localization Embryonic localization patterns Expressed Accumlation entire nucleus Degraded partially stage 4 Intranuclear accumulation Subcellular localization patterns Pole cell exclusion Perinuclear around blastoderm nuclei Degraded completely stage 5 Degraded Maternal |
| stage6-7 | 
 | Stage 6-7 Intranuclear accumulation post blastoderm nuclei Accumlation entire nucleus Expressed Subset blastoderm nuclei Subcellular localization patterns Accumlation in subset nuclei vent blastoderm nuclei Zygotic Nuclei-associated localization Localized Blastoderm nuclei Local terms for zyg transcripts |
| stage8-9 | 
 | Segmented pattern Subcellular localization patterns Subset blastoderm nuclei Intranuclear accumulation Expressed Accumlation entire nucleus Localized Blastoderm nuclei Nuclei-associated localization Stage 8-9 Local terms for zyg transcripts Zygotic Accumlation in subset nuclei |
| stage10- | 
 | CNS Expressed Stage 10- Sensory sys Subcellular localization patterns Zygotic Head Localized Blastoderm nuclei Brain vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | faint ubiquitous list_4-6:specific gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A list_7-8:specific gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | faint ubiquitous gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||