Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | somatic cells oocyte interfollicular stalk cells enrichment_ubiquitous post follicle cells ant follicle cells |
| stage8 |  s
 s
 s
 s
 s | cytoplasmic foci post follicle cells ant follicle cells germline cells_ubiquitous oocyte somatic cells |
| stage9 |  s
 s
 s
 s
 s | somatic cells follicle cells germline cells_ubiquitous follicle cells_ubiquitous |
| stage10 |  s
 s
 s
 s
 s
 s | germline cells_ubiquitous follicle cells follicle cells_ubiquitous somatic cells |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Expressed Embryonic localization patterns Exclusionary patterns Localized Yolk cortex exclusion Stage 1-3 Medium expression (21-40ms exp) Annotated by Eric Maternal |
| stage4-5 | 
 | Zygotic Blastoderm nuclei Exclusionary patterns Apical exclusion Nuclei-associated localization Degradation maternal transcripts Degraded Degraded completely stage 5 Expressed Perinuclear subset of nuclei Degraded partially stage 4 Pole cell exclusion Stage 4-5 post blastoderm nuclei Embryonic localization patterns Accumlation entire nucleus Localized Perinuclear localization Subset blastoderm nuclei Local terms for zyg transcripts vent blastoderm nuclei Perinuclear around blastoderm nuclei Accumlation in subset nuclei Intranuclear accumulation Subcellular localization patterns Maternal |
| stage6-7 | 
 | vent blastoderm nuclei Accumlation in subset nuclei Intranuclear accumulation post blastoderm nuclei Stage 6-7 Subcellular localization patterns Accumlation entire nucleus Zygotic Blastoderm nuclei Subset blastoderm nuclei Nuclei-associated localization Localized Local terms for zyg transcripts Expressed |
| stage8-9 | 
 | Nuclei-associated localization Subset blastoderm nuclei Localized Accumlation entire nucleus Zygotic Blastoderm nuclei Expressed Local terms for zyg transcripts Accumlation in subset nuclei Subcellular localization patterns Stage 8-9 Intranuclear accumulation Segmented pattern |
| stage10- | 
 | Subcellular localization patterns Stage 10- Sensory sys Brain CNS Expressed Blastoderm nuclei Head Zygotic Localized vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | gap list_4-6:specific faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap list_7-8:specific vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||