Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | oocyte interfollicular stalk cells ant follicle cells enrichment_ubiquitous post follicle cells somatic cells |
| stage8 |  s
 s
 s
 s
 s | oocyte ant follicle cells post follicle cells cytoplasmic foci somatic cells germline cells_ubiquitous |
| stage9 |  s
 s
 s
 s
 s | follicle cells_ubiquitous germline cells_ubiquitous somatic cells follicle cells |
| stage10 |  s
 s
 s
 s
 s
 s | follicle cells follicle cells_ubiquitous germline cells_ubiquitous somatic cells |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Annotated by Eric Localized Embryonic localization patterns Stage 1-3 Expressed Yolk cortex exclusion Medium expression (21-40ms exp) Exclusionary patterns Maternal |
| stage4-5 | 
 | Intranuclear accumulation Pole cell exclusion Perinuclear subset of nuclei Degradation maternal transcripts Expressed post blastoderm nuclei Nuclei-associated localization Subcellular localization patterns Subset blastoderm nuclei Localized Blastoderm nuclei Exclusionary patterns Perinuclear localization Perinuclear around blastoderm nuclei Degraded partially stage 4 Accumlation entire nucleus Degraded completely stage 5 Local terms for zyg transcripts Embryonic localization patterns Stage 4-5 Accumlation in subset nuclei Degraded Zygotic vent blastoderm nuclei Apical exclusion Maternal |
| stage6-7 | 
 | Intranuclear accumulation Nuclei-associated localization Accumlation entire nucleus Subcellular localization patterns post blastoderm nuclei Expressed Local terms for zyg transcripts Subset blastoderm nuclei Localized Accumlation in subset nuclei vent blastoderm nuclei Stage 6-7 Blastoderm nuclei Zygotic |
| stage8-9 | 
 | Blastoderm nuclei Zygotic Segmented pattern Localized Accumlation in subset nuclei Expressed Nuclei-associated localization Accumlation entire nucleus Subcellular localization patterns Subset blastoderm nuclei Local terms for zyg transcripts Intranuclear accumulation Stage 8-9 |
| stage10- | 
 | Sensory sys Head Expressed Subcellular localization patterns Localized CNS Brain Blastoderm nuclei Stage 10- Zygotic vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | faint ubiquitous list_4-6:specific gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | list_7-8:specific gap vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||