Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | enrichment_ubiquitous somatic cells ant follicle cells oocyte interfollicular stalk cells post follicle cells |
| stage8 |  s
 s
 s
 s
 s | ant follicle cells somatic cells germline cells_ubiquitous cytoplasmic foci post follicle cells oocyte |
| stage9 |  s
 s
 s
 s
 s | follicle cells somatic cells germline cells_ubiquitous follicle cells_ubiquitous |
| stage10 |  s
 s
 s
 s
 s
 s | germline cells_ubiquitous follicle cells_ubiquitous somatic cells follicle cells |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Yolk cortex exclusion Stage 1-3 Expressed Embryonic localization patterns Medium expression (21-40ms exp) Annotated by Eric Exclusionary patterns Localized Maternal |
| stage4-5 | 
 | Degraded post blastoderm nuclei Perinuclear subset of nuclei Exclusionary patterns Intranuclear accumulation Degraded completely stage 5 Stage 4-5 Subcellular localization patterns Expressed Apical exclusion Perinuclear localization Zygotic Localized Subset blastoderm nuclei Degraded partially stage 4 Accumlation in subset nuclei Degradation maternal transcripts Embryonic localization patterns Blastoderm nuclei Perinuclear around blastoderm nuclei vent blastoderm nuclei Nuclei-associated localization Pole cell exclusion Local terms for zyg transcripts Accumlation entire nucleus Maternal |
| stage6-7 | 
 | vent blastoderm nuclei Stage 6-7 Expressed Blastoderm nuclei Accumlation entire nucleus Local terms for zyg transcripts Nuclei-associated localization Localized Subset blastoderm nuclei post blastoderm nuclei Zygotic Subcellular localization patterns Accumlation in subset nuclei Intranuclear accumulation |
| stage8-9 | 
 | Zygotic Stage 8-9 Localized Segmented pattern Subset blastoderm nuclei Intranuclear accumulation Accumlation in subset nuclei Subcellular localization patterns Expressed Blastoderm nuclei Local terms for zyg transcripts Nuclei-associated localization Accumlation entire nucleus |
| stage10- | 
 | Blastoderm nuclei Expressed Brain Subcellular localization patterns Stage 10- Sensory sys Head CNS Localized Zygotic vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | faint ubiquitous gap list_4-6:specific vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap list_7-8:specific vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | faint ubiquitous gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||