Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | enrichment_ubiquitous interfollicular stalk cells oocyte somatic cells post follicle cells ant follicle cells |
| stage8 |  s
 s
 s
 s
 s | post follicle cells ant follicle cells somatic cells oocyte germline cells_ubiquitous cytoplasmic foci |
| stage9 |  s
 s
 s
 s
 s | follicle cells_ubiquitous follicle cells germline cells_ubiquitous somatic cells |
| stage10 |  s
 s
 s
 s
 s
 s | follicle cells_ubiquitous follicle cells germline cells_ubiquitous somatic cells |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Stage 1-3 Annotated by Eric Expressed Yolk cortex exclusion Exclusionary patterns Medium expression (21-40ms exp) Localized Embryonic localization patterns Maternal |
| stage4-5 | 
 | Blastoderm nuclei post blastoderm nuclei Nuclei-associated localization Degraded Local terms for zyg transcripts Perinuclear around blastoderm nuclei Degradation maternal transcripts vent blastoderm nuclei Degraded completely stage 5 Subcellular localization patterns Expressed Exclusionary patterns Subset blastoderm nuclei Intranuclear accumulation Pole cell exclusion Accumlation entire nucleus Zygotic Stage 4-5 Accumlation in subset nuclei Degraded partially stage 4 Perinuclear subset of nuclei Localized Embryonic localization patterns Apical exclusion Perinuclear localization Maternal |
| stage6-7 | 
 | vent blastoderm nuclei Stage 6-7 Blastoderm nuclei Local terms for zyg transcripts Nuclei-associated localization post blastoderm nuclei Localized Intranuclear accumulation Subcellular localization patterns Accumlation entire nucleus Zygotic Expressed Accumlation in subset nuclei Subset blastoderm nuclei |
| stage8-9 | 
 | Intranuclear accumulation Localized Stage 8-9 Accumlation in subset nuclei Subset blastoderm nuclei Expressed Segmented pattern Subcellular localization patterns Zygotic Accumlation entire nucleus Local terms for zyg transcripts Nuclei-associated localization Blastoderm nuclei |
| stage10- | 
 | Stage 10- Expressed Subcellular localization patterns Zygotic Sensory sys CNS Localized Brain Blastoderm nuclei Head vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | faint ubiquitous gap list_4-6:specific vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | list_7-8:specific vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||