Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | oocyte ant follicle cells somatic cells enrichment_ubiquitous post follicle cells interfollicular stalk cells |
| stage8 |  s
 s
 s
 s
 s | somatic cells cytoplasmic foci oocyte ant follicle cells post follicle cells germline cells_ubiquitous |
| stage9 |  s
 s
 s
 s
 s | germline cells_ubiquitous follicle cells follicle cells_ubiquitous somatic cells |
| stage10 |  s
 s
 s
 s
 s
 s | germline cells_ubiquitous somatic cells follicle cells_ubiquitous follicle cells |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Annotated by Eric Embryonic localization patterns Expressed Medium expression (21-40ms exp) Exclusionary patterns Stage 1-3 Yolk cortex exclusion Localized Maternal |
| stage4-5 | 
 | Accumlation in subset nuclei Apical exclusion Pole cell exclusion Embryonic localization patterns Degradation maternal transcripts Perinuclear subset of nuclei post blastoderm nuclei Exclusionary patterns Local terms for zyg transcripts Nuclei-associated localization vent blastoderm nuclei Perinuclear around blastoderm nuclei Subset blastoderm nuclei Intranuclear accumulation Degraded partially stage 4 Subcellular localization patterns Perinuclear localization Zygotic Stage 4-5 Degraded Expressed Accumlation entire nucleus Degraded completely stage 5 Localized Blastoderm nuclei Maternal |
| stage6-7 | 
 | Nuclei-associated localization vent blastoderm nuclei Blastoderm nuclei Local terms for zyg transcripts Intranuclear accumulation Subset blastoderm nuclei Stage 6-7 post blastoderm nuclei Localized Accumlation entire nucleus Zygotic Expressed Accumlation in subset nuclei Subcellular localization patterns |
| stage8-9 | 
 | Segmented pattern Subcellular localization patterns Accumlation in subset nuclei Expressed Zygotic Localized Accumlation entire nucleus Stage 8-9 Intranuclear accumulation Subset blastoderm nuclei Nuclei-associated localization Blastoderm nuclei Local terms for zyg transcripts |
| stage10- | 
 | Expressed Sensory sys Zygotic Stage 10- Subcellular localization patterns CNS Blastoderm nuclei Localized Head Brain vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | faint ubiquitous list_4-6:specific gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap list_7-8:specific vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||