Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | enrichment_ubiquitous ant follicle cells somatic cells interfollicular stalk cells post follicle cells oocyte |
| stage8 |  s
 s
 s
 s
 s | cytoplasmic foci ant follicle cells germline cells_ubiquitous somatic cells oocyte post follicle cells |
| stage9 |  s
 s
 s
 s
 s | somatic cells follicle cells_ubiquitous follicle cells germline cells_ubiquitous |
| stage10 |  s
 s
 s
 s
 s
 s | somatic cells follicle cells_ubiquitous follicle cells germline cells_ubiquitous |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Stage 1-3 Exclusionary patterns Embryonic localization patterns Yolk cortex exclusion Localized Annotated by Eric Medium expression (21-40ms exp) Expressed Maternal |
| stage4-5 | 
 | post blastoderm nuclei vent blastoderm nuclei Blastoderm nuclei Accumlation in subset nuclei Local terms for zyg transcripts Subset blastoderm nuclei Exclusionary patterns Nuclei-associated localization Embryonic localization patterns Apical exclusion Degradation maternal transcripts Zygotic Expressed Accumlation entire nucleus Perinuclear subset of nuclei Subcellular localization patterns Intranuclear accumulation Perinuclear around blastoderm nuclei Degraded partially stage 4 Localized Degraded completely stage 5 Stage 4-5 Degraded Perinuclear localization Pole cell exclusion Maternal |
| stage6-7 | 
 | Local terms for zyg transcripts Intranuclear accumulation Subset blastoderm nuclei Nuclei-associated localization Localized Stage 6-7 Expressed Zygotic post blastoderm nuclei vent blastoderm nuclei Accumlation entire nucleus Blastoderm nuclei Accumlation in subset nuclei Subcellular localization patterns |
| stage8-9 | 
 | Stage 8-9 Subcellular localization patterns Accumlation in subset nuclei Expressed Zygotic Blastoderm nuclei Accumlation entire nucleus Local terms for zyg transcripts Nuclei-associated localization Intranuclear accumulation Subset blastoderm nuclei Localized Segmented pattern |
| stage10- | 
 | Blastoderm nuclei CNS Expressed Head Zygotic Subcellular localization patterns Stage 10- Localized Brain Sensory sys vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | faint ubiquitous gap list_4-6:specific vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap list_7-8:specific vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||