Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | ant follicle cells post follicle cells interfollicular stalk cells oocyte somatic cells enrichment_ubiquitous |
| stage8 |  s
 s
 s
 s
 s | ant follicle cells post follicle cells cytoplasmic foci somatic cells germline cells_ubiquitous oocyte |
| stage9 |  s
 s
 s
 s
 s | follicle cells_ubiquitous somatic cells follicle cells germline cells_ubiquitous |
| stage10 |  s
 s
 s
 s
 s
 s | follicle cells_ubiquitous somatic cells germline cells_ubiquitous follicle cells |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Exclusionary patterns Expressed Medium expression (21-40ms exp) Localized Embryonic localization patterns Annotated by Eric Yolk cortex exclusion Stage 1-3 Maternal |
| stage4-5 | 
 | Pole cell exclusion Degraded completely stage 5 Embryonic localization patterns Stage 4-5 Local terms for zyg transcripts Subcellular localization patterns Subset blastoderm nuclei Exclusionary patterns Perinuclear around blastoderm nuclei Perinuclear subset of nuclei Degraded partially stage 4 Perinuclear localization post blastoderm nuclei Degraded Zygotic Localized Apical exclusion Accumlation in subset nuclei vent blastoderm nuclei Expressed Degradation maternal transcripts Accumlation entire nucleus Nuclei-associated localization Blastoderm nuclei Intranuclear accumulation Maternal |
| stage6-7 | 
 | Nuclei-associated localization Subset blastoderm nuclei Intranuclear accumulation Blastoderm nuclei Accumlation entire nucleus Local terms for zyg transcripts Accumlation in subset nuclei Subcellular localization patterns vent blastoderm nuclei Expressed Zygotic post blastoderm nuclei Localized Stage 6-7 |
| stage8-9 | 
 | Accumlation entire nucleus Subcellular localization patterns Local terms for zyg transcripts Accumlation in subset nuclei Expressed Subset blastoderm nuclei Nuclei-associated localization Segmented pattern Blastoderm nuclei Intranuclear accumulation Zygotic Localized Stage 8-9 |
| stage10- | 
 | Expressed Head Subcellular localization patterns Brain Blastoderm nuclei Sensory sys Stage 10- Zygotic CNS Localized vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | list_4-6:specific gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A list_7-8:specific gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | faint ubiquitous gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||