Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | enrichment_ubiquitous interfollicular stalk cells post follicle cells ant follicle cells oocyte somatic cells |
| stage8 |  s
 s
 s
 s
 s | somatic cells germline cells_ubiquitous ant follicle cells oocyte cytoplasmic foci post follicle cells |
| stage9 |  s
 s
 s
 s
 s | germline cells_ubiquitous follicle cells_ubiquitous somatic cells follicle cells |
| stage10 |  s
 s
 s
 s
 s
 s | somatic cells follicle cells_ubiquitous germline cells_ubiquitous follicle cells |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Embryonic localization patterns Exclusionary patterns Yolk cortex exclusion Localized Annotated by Eric Medium expression (21-40ms exp) Expressed Stage 1-3 Maternal |
| stage4-5 | 
 | Apical exclusion Degraded Subcellular localization patterns Stage 4-5 Accumlation in subset nuclei Intranuclear accumulation Expressed Zygotic vent blastoderm nuclei Localized Perinuclear localization Subset blastoderm nuclei Degraded partially stage 4 Exclusionary patterns Nuclei-associated localization Perinuclear around blastoderm nuclei Local terms for zyg transcripts Accumlation entire nucleus Degraded completely stage 5 post blastoderm nuclei Degradation maternal transcripts Embryonic localization patterns Pole cell exclusion Blastoderm nuclei Perinuclear subset of nuclei Maternal |
| stage6-7 | 
 | Localized Nuclei-associated localization Blastoderm nuclei Subset blastoderm nuclei Accumlation entire nucleus Accumlation in subset nuclei Local terms for zyg transcripts Subcellular localization patterns Stage 6-7 vent blastoderm nuclei Zygotic post blastoderm nuclei Intranuclear accumulation Expressed |
| stage8-9 | 
 | Subset blastoderm nuclei Segmented pattern Blastoderm nuclei Nuclei-associated localization Localized Stage 8-9 Intranuclear accumulation Expressed Zygotic Subcellular localization patterns Local terms for zyg transcripts Accumlation entire nucleus Accumlation in subset nuclei |
| stage10- | 
 | CNS Blastoderm nuclei Brain Localized Head Expressed Sensory sys Zygotic Subcellular localization patterns Stage 10- vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | gap faint ubiquitous list_4-6:specific vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | list_7-8:specific vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||