Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | oocyte interfollicular stalk cells somatic cells ant follicle cells post follicle cells enrichment_ubiquitous |
| stage8 |  s
 s
 s
 s
 s | germline cells_ubiquitous somatic cells oocyte post follicle cells ant follicle cells cytoplasmic foci |
| stage9 |  s
 s
 s
 s
 s | follicle cells somatic cells germline cells_ubiquitous follicle cells_ubiquitous |
| stage10 |  s
 s
 s
 s
 s
 s | follicle cells somatic cells germline cells_ubiquitous follicle cells_ubiquitous |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Embryonic localization patterns Expressed Yolk cortex exclusion Exclusionary patterns Localized Stage 1-3 Medium expression (21-40ms exp) Annotated by Eric Maternal |
| stage4-5 | 
 | Embryonic localization patterns Pole cell exclusion Accumlation entire nucleus Intranuclear accumulation Exclusionary patterns Degraded partially stage 4 Expressed Localized Degradation maternal transcripts Local terms for zyg transcripts Accumlation in subset nuclei Nuclei-associated localization Blastoderm nuclei Apical exclusion Zygotic Subcellular localization patterns Subset blastoderm nuclei Perinuclear around blastoderm nuclei post blastoderm nuclei vent blastoderm nuclei Perinuclear subset of nuclei Degraded Perinuclear localization Stage 4-5 Degraded completely stage 5 Maternal |
| stage6-7 | 
 | Local terms for zyg transcripts Accumlation in subset nuclei Nuclei-associated localization Stage 6-7 Localized post blastoderm nuclei Expressed vent blastoderm nuclei Intranuclear accumulation Accumlation entire nucleus Blastoderm nuclei Zygotic Subset blastoderm nuclei Subcellular localization patterns |
| stage8-9 | 
 | Stage 8-9 Nuclei-associated localization Segmented pattern Accumlation in subset nuclei Local terms for zyg transcripts Localized Expressed Subcellular localization patterns Subset blastoderm nuclei Blastoderm nuclei Zygotic Intranuclear accumulation Accumlation entire nucleus |
| stage10- | 
 | CNS Zygotic Blastoderm nuclei Stage 10- Subcellular localization patterns Brain Expressed Sensory sys Localized Head vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | gap faint ubiquitous list_4-6:specific vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap list_7-8:specific vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||