Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | interfollicular stalk cells enrichment_ubiquitous post follicle cells somatic cells oocyte ant follicle cells |
| stage8 |  s
 s
 s
 s
 s | post follicle cells germline cells_ubiquitous ant follicle cells cytoplasmic foci somatic cells oocyte |
| stage9 |  s
 s
 s
 s
 s | somatic cells follicle cells_ubiquitous follicle cells germline cells_ubiquitous |
| stage10 |  s
 s
 s
 s
 s
 s | follicle cells germline cells_ubiquitous follicle cells_ubiquitous somatic cells |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Medium expression (21-40ms exp) Yolk cortex exclusion Exclusionary patterns Expressed Localized Annotated by Eric Stage 1-3 Embryonic localization patterns Maternal |
| stage4-5 | 
 | Zygotic Stage 4-5 Pole cell exclusion Perinuclear around blastoderm nuclei Local terms for zyg transcripts Nuclei-associated localization Expressed Localized Intranuclear accumulation Degraded completely stage 5 Blastoderm nuclei Accumlation in subset nuclei Perinuclear subset of nuclei Accumlation entire nucleus Apical exclusion post blastoderm nuclei Perinuclear localization Exclusionary patterns Subcellular localization patterns Degradation maternal transcripts Subset blastoderm nuclei Degraded vent blastoderm nuclei Degraded partially stage 4 Embryonic localization patterns Maternal |
| stage6-7 | 
 | Stage 6-7 post blastoderm nuclei Accumlation entire nucleus Zygotic Subcellular localization patterns Subset blastoderm nuclei Local terms for zyg transcripts Nuclei-associated localization Localized vent blastoderm nuclei Expressed Intranuclear accumulation Blastoderm nuclei Accumlation in subset nuclei |
| stage8-9 | 
 | Expressed Localized Intranuclear accumulation Local terms for zyg transcripts Nuclei-associated localization Accumlation in subset nuclei Stage 8-9 Blastoderm nuclei Segmented pattern Accumlation entire nucleus Subset blastoderm nuclei Subcellular localization patterns Zygotic |
| stage10- | 
 | Blastoderm nuclei Localized Expressed Zygotic CNS Subcellular localization patterns Brain Stage 10- Sensory sys Head vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | faint ubiquitous gap list_4-6:specific vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | list_7-8:specific vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||