Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | post follicle cells interfollicular stalk cells enrichment_ubiquitous ant follicle cells somatic cells oocyte |
| stage8 |  s
 s
 s
 s
 s | germline cells_ubiquitous post follicle cells cytoplasmic foci oocyte somatic cells ant follicle cells |
| stage9 |  s
 s
 s
 s
 s | somatic cells follicle cells_ubiquitous follicle cells germline cells_ubiquitous |
| stage10 |  s
 s
 s
 s
 s
 s | follicle cells_ubiquitous somatic cells follicle cells germline cells_ubiquitous |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Embryonic localization patterns Medium expression (21-40ms exp) Exclusionary patterns Expressed Annotated by Eric Yolk cortex exclusion Stage 1-3 Localized Maternal |
| stage4-5 | 
 | Subset blastoderm nuclei Perinuclear subset of nuclei Localized Degradation maternal transcripts Accumlation entire nucleus Subcellular localization patterns Apical exclusion Intranuclear accumulation post blastoderm nuclei Exclusionary patterns Stage 4-5 Perinuclear around blastoderm nuclei Nuclei-associated localization Accumlation in subset nuclei Perinuclear localization Degraded completely stage 5 Pole cell exclusion Degraded Zygotic Degraded partially stage 4 Blastoderm nuclei Local terms for zyg transcripts Embryonic localization patterns vent blastoderm nuclei Expressed Maternal |
| stage6-7 | 
 | Subset blastoderm nuclei Zygotic Blastoderm nuclei Localized Local terms for zyg transcripts Accumlation entire nucleus Intranuclear accumulation Subcellular localization patterns Nuclei-associated localization post blastoderm nuclei Stage 6-7 Accumlation in subset nuclei vent blastoderm nuclei Expressed |
| stage8-9 | 
 | Local terms for zyg transcripts Subcellular localization patterns Intranuclear accumulation Accumlation entire nucleus Segmented pattern Nuclei-associated localization Expressed Accumlation in subset nuclei Stage 8-9 Subset blastoderm nuclei Zygotic Localized Blastoderm nuclei |
| stage10- | 
 | CNS Zygotic Localized Blastoderm nuclei Sensory sys Head Brain Stage 10- Expressed Subcellular localization patterns vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | gap list_4-6:specific faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap list_7-8:specific vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||