Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | somatic cells ant follicle cells oocyte post follicle cells interfollicular stalk cells enrichment_ubiquitous |
| stage8 |  s
 s
 s
 s
 s | ant follicle cells somatic cells germline cells_ubiquitous cytoplasmic foci post follicle cells oocyte |
| stage9 |  s
 s
 s
 s
 s | germline cells_ubiquitous follicle cells somatic cells follicle cells_ubiquitous |
| stage10 |  s
 s
 s
 s
 s
 s | germline cells_ubiquitous follicle cells somatic cells follicle cells_ubiquitous |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Annotated by Eric Stage 1-3 Localized Exclusionary patterns Embryonic localization patterns Medium expression (21-40ms exp) Expressed Yolk cortex exclusion Maternal |
| stage4-5 | 
 | Embryonic localization patterns Local terms for zyg transcripts Localized Exclusionary patterns Perinuclear subset of nuclei Degraded post blastoderm nuclei Stage 4-5 Nuclei-associated localization Degradation maternal transcripts Perinuclear localization vent blastoderm nuclei Pole cell exclusion Perinuclear around blastoderm nuclei Intranuclear accumulation Subset blastoderm nuclei Expressed Subcellular localization patterns Blastoderm nuclei Apical exclusion Accumlation entire nucleus Accumlation in subset nuclei Zygotic Degraded completely stage 5 Degraded partially stage 4 Maternal |
| stage6-7 | 
 | Expressed Intranuclear accumulation Subset blastoderm nuclei Local terms for zyg transcripts Localized Subcellular localization patterns Nuclei-associated localization vent blastoderm nuclei Blastoderm nuclei Accumlation entire nucleus post blastoderm nuclei Accumlation in subset nuclei Stage 6-7 Zygotic |
| stage8-9 | 
 | Nuclei-associated localization Segmented pattern Blastoderm nuclei Accumlation entire nucleus Accumlation in subset nuclei Zygotic Subset blastoderm nuclei Intranuclear accumulation Expressed Local terms for zyg transcripts Subcellular localization patterns Stage 8-9 Localized |
| stage10- | 
 | Stage 10- Head CNS Sensory sys Blastoderm nuclei Zygotic Expressed Localized Subcellular localization patterns Brain vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | gap list_4-6:specific faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap list_7-8:specific vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||