Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | ant follicle cells enrichment_ubiquitous oocyte interfollicular stalk cells post follicle cells somatic cells |
| stage8 |  s
 s
 s
 s
 s | ant follicle cells oocyte cytoplasmic foci post follicle cells germline cells_ubiquitous somatic cells |
| stage9 |  s
 s
 s
 s
 s | germline cells_ubiquitous somatic cells follicle cells_ubiquitous follicle cells |
| stage10 |  s
 s
 s
 s
 s
 s | germline cells_ubiquitous follicle cells_ubiquitous somatic cells follicle cells |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Expressed Localized Embryonic localization patterns Yolk cortex exclusion Stage 1-3 Annotated by Eric Exclusionary patterns Medium expression (21-40ms exp) Maternal |
| stage4-5 | 
 | Apical exclusion Embryonic localization patterns Subset blastoderm nuclei Perinuclear localization Blastoderm nuclei Exclusionary patterns Degraded Degradation maternal transcripts Degraded completely stage 5 Localized Zygotic Accumlation in subset nuclei Intranuclear accumulation Perinuclear around blastoderm nuclei Nuclei-associated localization Accumlation entire nucleus post blastoderm nuclei vent blastoderm nuclei Perinuclear subset of nuclei Pole cell exclusion Local terms for zyg transcripts Expressed Degraded partially stage 4 Subcellular localization patterns Stage 4-5 Maternal |
| stage6-7 | 
 | Accumlation in subset nuclei Stage 6-7 Zygotic Subcellular localization patterns Expressed Localized Blastoderm nuclei Local terms for zyg transcripts Subset blastoderm nuclei vent blastoderm nuclei post blastoderm nuclei Accumlation entire nucleus Nuclei-associated localization Intranuclear accumulation |
| stage8-9 | 
 | Blastoderm nuclei Local terms for zyg transcripts Subset blastoderm nuclei Segmented pattern Accumlation entire nucleus Intranuclear accumulation Nuclei-associated localization Zygotic Accumlation in subset nuclei Subcellular localization patterns Expressed Stage 8-9 Localized |
| stage10- | 
 | Sensory sys Blastoderm nuclei Stage 10- Subcellular localization patterns Zygotic Head Brain Localized Expressed CNS vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | faint ubiquitous list_4-6:specific gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | list_7-8:specific vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | faint ubiquitous gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||