Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | enrichment_ubiquitous post follicle cells oocyte somatic cells ant follicle cells interfollicular stalk cells |
| stage8 |  s
 s
 s
 s
 s | somatic cells ant follicle cells germline cells_ubiquitous post follicle cells cytoplasmic foci oocyte |
| stage9 |  s
 s
 s
 s
 s | follicle cells follicle cells_ubiquitous somatic cells germline cells_ubiquitous |
| stage10 |  s
 s
 s
 s
 s
 s | follicle cells somatic cells follicle cells_ubiquitous germline cells_ubiquitous |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Embryonic localization patterns Exclusionary patterns Localized Medium expression (21-40ms exp) Yolk cortex exclusion Expressed Annotated by Eric Stage 1-3 Maternal |
| stage4-5 | 
 | Pole cell exclusion Blastoderm nuclei Subcellular localization patterns Degraded completely stage 5 Degraded partially stage 4 Degraded Embryonic localization patterns post blastoderm nuclei Perinuclear localization Localized Exclusionary patterns Intranuclear accumulation Stage 4-5 Perinuclear around blastoderm nuclei Apical exclusion Subset blastoderm nuclei Expressed Perinuclear subset of nuclei Local terms for zyg transcripts vent blastoderm nuclei Accumlation in subset nuclei Degradation maternal transcripts Accumlation entire nucleus Zygotic Nuclei-associated localization Maternal |
| stage6-7 | 
 | Local terms for zyg transcripts Blastoderm nuclei Subcellular localization patterns Stage 6-7 Subset blastoderm nuclei Expressed Localized Intranuclear accumulation Zygotic Nuclei-associated localization vent blastoderm nuclei Accumlation in subset nuclei post blastoderm nuclei Accumlation entire nucleus |
| stage8-9 | 
 | Stage 8-9 Expressed Subset blastoderm nuclei Subcellular localization patterns Local terms for zyg transcripts Blastoderm nuclei Accumlation in subset nuclei Accumlation entire nucleus Nuclei-associated localization Segmented pattern Intranuclear accumulation Localized Zygotic |
| stage10- | 
 | CNS Zygotic Localized Stage 10- Sensory sys Expressed Blastoderm nuclei Head Subcellular localization patterns Brain vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | faint ubiquitous gap list_4-6:specific vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | list_7-8:specific vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | faint ubiquitous gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||