Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | interfollicular stalk cells post follicle cells somatic cells ant follicle cells enrichment_ubiquitous oocyte |
| stage8 |  s
 s
 s
 s
 s | oocyte post follicle cells somatic cells germline cells_ubiquitous ant follicle cells cytoplasmic foci |
| stage9 |  s
 s
 s
 s
 s | follicle cells_ubiquitous follicle cells somatic cells germline cells_ubiquitous |
| stage10 |  s
 s
 s
 s
 s
 s | somatic cells germline cells_ubiquitous follicle cells follicle cells_ubiquitous |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Embryonic localization patterns Medium expression (21-40ms exp) Yolk cortex exclusion Expressed Annotated by Eric Exclusionary patterns Stage 1-3 Localized Maternal |
| stage4-5 | 
 | Localized Nuclei-associated localization Accumlation entire nucleus Exclusionary patterns Pole cell exclusion Zygotic Subcellular localization patterns Degraded completely stage 5 Stage 4-5 post blastoderm nuclei Degraded partially stage 4 Embryonic localization patterns Perinuclear subset of nuclei Apical exclusion vent blastoderm nuclei Local terms for zyg transcripts Degraded Perinuclear localization Degradation maternal transcripts Subset blastoderm nuclei Intranuclear accumulation Perinuclear around blastoderm nuclei Expressed Accumlation in subset nuclei Blastoderm nuclei Maternal |
| stage6-7 | 
 | Subset blastoderm nuclei Zygotic Intranuclear accumulation Subcellular localization patterns Stage 6-7 Accumlation entire nucleus Nuclei-associated localization Localized Local terms for zyg transcripts vent blastoderm nuclei post blastoderm nuclei Blastoderm nuclei Expressed Accumlation in subset nuclei |
| stage8-9 | 
 | Blastoderm nuclei Expressed Accumlation in subset nuclei Stage 8-9 Accumlation entire nucleus Segmented pattern Localized Nuclei-associated localization Local terms for zyg transcripts Subset blastoderm nuclei Zygotic Intranuclear accumulation Subcellular localization patterns |
| stage10- | 
 | Sensory sys CNS Localized Stage 10- Zygotic Subcellular localization patterns Blastoderm nuclei Head Expressed Brain vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | faint ubiquitous gap list_4-6:specific vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap list_7-8:specific vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | faint ubiquitous gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||