Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | somatic cells enrichment_ubiquitous interfollicular stalk cells ant follicle cells post follicle cells oocyte |
| stage8 |  s
 s
 s
 s
 s | somatic cells cytoplasmic foci post follicle cells ant follicle cells germline cells_ubiquitous oocyte |
| stage9 |  s
 s
 s
 s
 s | germline cells_ubiquitous somatic cells follicle cells_ubiquitous follicle cells |
| stage10 |  s
 s
 s
 s
 s
 s | somatic cells follicle cells follicle cells_ubiquitous germline cells_ubiquitous |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Stage 1-3 Localized Medium expression (21-40ms exp) Expressed Yolk cortex exclusion Annotated by Eric Embryonic localization patterns Exclusionary patterns Maternal |
| stage4-5 | 
 | Blastoderm nuclei Stage 4-5 Subset blastoderm nuclei Local terms for zyg transcripts Perinuclear localization Degraded partially stage 4 Expressed Intranuclear accumulation Accumlation in subset nuclei Perinuclear subset of nuclei Accumlation entire nucleus Subcellular localization patterns Pole cell exclusion Degraded Localized Zygotic Degradation maternal transcripts Perinuclear around blastoderm nuclei Degraded completely stage 5 Apical exclusion post blastoderm nuclei Nuclei-associated localization vent blastoderm nuclei Embryonic localization patterns Exclusionary patterns Maternal |
| stage6-7 | 
 | vent blastoderm nuclei Nuclei-associated localization post blastoderm nuclei Accumlation in subset nuclei Subcellular localization patterns Accumlation entire nucleus Localized Blastoderm nuclei Intranuclear accumulation Expressed Zygotic Local terms for zyg transcripts Subset blastoderm nuclei Stage 6-7 |
| stage8-9 | 
 | Localized Blastoderm nuclei Stage 8-9 Intranuclear accumulation Expressed Subset blastoderm nuclei Local terms for zyg transcripts Zygotic Nuclei-associated localization Accumlation in subset nuclei Segmented pattern Subcellular localization patterns Accumlation entire nucleus |
| stage10- | 
 | Localized Blastoderm nuclei Head Brain Stage 10- Expressed Zygotic Sensory sys CNS Subcellular localization patterns vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | list_4-6:specific gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A list_7-8:specific gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | faint ubiquitous gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||