Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | interfollicular stalk cells enrichment_ubiquitous ant follicle cells oocyte somatic cells post follicle cells |
| stage8 |  s
 s
 s
 s
 s | cytoplasmic foci oocyte ant follicle cells germline cells_ubiquitous post follicle cells somatic cells |
| stage9 |  s
 s
 s
 s
 s | somatic cells germline cells_ubiquitous follicle cells_ubiquitous follicle cells |
| stage10 |  s
 s
 s
 s
 s
 s | follicle cells follicle cells_ubiquitous germline cells_ubiquitous somatic cells |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Expressed Exclusionary patterns Localized Annotated by Eric Medium expression (21-40ms exp) Embryonic localization patterns Stage 1-3 Yolk cortex exclusion Maternal |
| stage4-5 | 
 | Subcellular localization patterns Degraded partially stage 4 Stage 4-5 Localized Intranuclear accumulation post blastoderm nuclei Expressed Local terms for zyg transcripts Degraded completely stage 5 Zygotic Degraded Subset blastoderm nuclei Blastoderm nuclei vent blastoderm nuclei Pole cell exclusion Embryonic localization patterns Perinuclear localization Degradation maternal transcripts Accumlation in subset nuclei Apical exclusion Perinuclear around blastoderm nuclei Perinuclear subset of nuclei Exclusionary patterns Accumlation entire nucleus Nuclei-associated localization Maternal |
| stage6-7 | 
 | Accumlation in subset nuclei Localized Intranuclear accumulation post blastoderm nuclei Zygotic Local terms for zyg transcripts Accumlation entire nucleus Expressed Nuclei-associated localization Subset blastoderm nuclei Blastoderm nuclei vent blastoderm nuclei Subcellular localization patterns Stage 6-7 |
| stage8-9 | 
 | Segmented pattern Stage 8-9 Blastoderm nuclei Subset blastoderm nuclei Subcellular localization patterns Nuclei-associated localization Local terms for zyg transcripts Zygotic Accumlation entire nucleus Expressed Localized Accumlation in subset nuclei Intranuclear accumulation |
| stage10- | 
 | Subcellular localization patterns Blastoderm nuclei Stage 10- Head Brain Sensory sys CNS Localized Zygotic Expressed vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | gap list_4-6:specific faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A list_7-8:specific gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | faint ubiquitous gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||