Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | enrichment_ubiquitous post follicle cells oocyte interfollicular stalk cells ant follicle cells somatic cells |
| stage8 |  s
 s
 s
 s
 s | ant follicle cells somatic cells cytoplasmic foci oocyte post follicle cells germline cells_ubiquitous |
| stage9 |  s
 s
 s
 s
 s | somatic cells germline cells_ubiquitous follicle cells_ubiquitous follicle cells |
| stage10 |  s
 s
 s
 s
 s
 s | follicle cells germline cells_ubiquitous follicle cells_ubiquitous somatic cells |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Medium expression (21-40ms exp) Expressed Stage 1-3 Annotated by Eric Localized Embryonic localization patterns Yolk cortex exclusion Exclusionary patterns Maternal |
| stage4-5 | 
 | Perinuclear subset of nuclei Accumlation entire nucleus Perinuclear localization post blastoderm nuclei Pole cell exclusion Subcellular localization patterns Localized Accumlation in subset nuclei Subset blastoderm nuclei Nuclei-associated localization Degraded completely stage 5 Expressed Local terms for zyg transcripts Degraded partially stage 4 Perinuclear around blastoderm nuclei Blastoderm nuclei vent blastoderm nuclei Embryonic localization patterns Apical exclusion Exclusionary patterns Degradation maternal transcripts Degraded Stage 4-5 Intranuclear accumulation Zygotic Maternal |
| stage6-7 | 
 | Stage 6-7 Local terms for zyg transcripts Expressed Zygotic Intranuclear accumulation vent blastoderm nuclei Localized Subcellular localization patterns post blastoderm nuclei Accumlation entire nucleus Blastoderm nuclei Nuclei-associated localization Accumlation in subset nuclei Subset blastoderm nuclei |
| stage8-9 | 
 | Local terms for zyg transcripts Segmented pattern Intranuclear accumulation Zygotic Expressed Localized Subcellular localization patterns Accumlation entire nucleus Blastoderm nuclei Nuclei-associated localization Stage 8-9 Accumlation in subset nuclei Subset blastoderm nuclei |
| stage10- | 
 | Sensory sys Blastoderm nuclei Localized Subcellular localization patterns Expressed Zygotic Stage 10- Brain CNS Head vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | gap faint ubiquitous list_4-6:specific vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | list_7-8:specific vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | faint ubiquitous gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||