Annotation summary for dm in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD32539-dg (Flybase link CG10798 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | follicle cells germline cells_ubiquitous somatic cells nurse cells_nuclear foci nurse cells nuclear foci |
| stage8 |  s
 s
 s
 s | nuclear foci nurse cells nurse cells_nuclear foci oocyte follicle cells somatic cells germline cells_ubiquitous cytoplasmic foci |
| stage9 |  s
 s
 s
 s
 s
 s | cytoplasmic foci nurse cells_nuclear foci somatic cells follicle cells oocyte nuclear foci nurse cells |
| stage10 |  s
 s
 s
 s
 s
 s
 s | oocyte nucleus somatic cells post restriction nuclear foci nurse cells nurse cells_nuclear foci follicle cells oocyte |
| Probe source: | LD32539 (Flybase link CG10798 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | GM04911 (Flybase link CG10798 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | LD32539-tf (Flybase link CG10798 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for dm in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD32539 (Flybase link CG10798 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Nuclei associated localization Localized Perinuclear around pole cell nuclei Embryonic localization patterns Cell division apparatus Expressed Stage 1-3 Microtubule-associated Subcellular localization patterns Perinuclear localization Perinuclear around cortical nuclei Weak expression (>41ms exp) post localization Annotated by Eric Maternal Pole plasm |
| stage4-5 | 
 | Degraded completely stage 5 Stage 4-5 Segmented pattern Degraded partially stage 4 Terminal-gene pattern Blastoderm nuclei Pole cell enrichment post localization Pole cell localization Zygotic Subset blastoderm nuclei Localized Degraded Expressed Embryonic localization patterns Degradation maternal transcripts Zygotic starting stage 5 Maternal |
| stage6-7 | 
 | Subset blastoderm nuclei Terminal-gene pattern Expressed Stage 6-7 Blastoderm nuclei Segmented pattern Zygotic |
| stage8-9 | 
 | Expression in mesoderm Expressed Blastoderm nuclei Random yolk nuclei Stage 8-9 Expression in API Segmented pattern Zygotic Subset blastoderm nuclei Subset yolk nuclei Yolk nuclei |
| Probe source: | GM04911 (Flybase link CG10798 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | No probe Annotated by Christina |
| stage4-5 | 
 | |
| stage6-7 | 
 | |
| stage8-9 | 
 | |
Annotation summary for dm in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD32539-tf (Flybase link CG10798 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker (localised) maternal pole plasm | |
| stage4-6 | subset cellular blastoderm procephalic ectoderm AISN foregut AISN trunk mesoderm AISN head mesoderm AISN post endoderm AISN endoderm AISN ant endoderm AISN | |
| stage7-8 | foregut A trunk mesoderm PR head mesoderm PR ant endoderm A post endoderm PR | |
| stage9-10 | foregut PR salivary gland body SA trunk mesoderm PR head mesoderm PR post endoderm PR ant endoderm PR | |
| stage11-12 | foregut PR proventriculus PR tracheal PR anal pad SA salivary gland body PR hindgut proper PR trunk mesoderm PR dors pharyngeal muscle PR post midgut PR ant midgut PR | |
| stage13-16 | proventriculus salivary gland duct anal pad large intestine hindgut muscle sys somatic muscle lymph gland fat body corpus cardiacum dors prothoracic pharyngeal muscle midgut | |
| Probe source: | LD32539-dg (Flybase link CG10798 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal pole plasm | |
| stage4-6 | subset AISN list_4-6:specific cellular blastoderm procephalic ectoderm AISN foregut AISN trunk mesoderm AISN head mesoderm AISN endoderm AISN ant endoderm AISN post endoderm AISN | |
| stage7-8 | list_7-8:specific foregut A trunk mesoderm PR head mesoderm PR post endoderm PR ant endoderm A | |
| stage9-10 | foregut PR salivary gland body SA trunk mesoderm PR head mesoderm PR ant endoderm PR post endoderm PR | |
| stage11-12 | proventriculus PR foregut PR tracheal PR salivary gland body PR anal pad SA hindgut proper PR trunk mesoderm PR dors pharyngeal muscle PR post midgut PR ant midgut PR | |
| stage13-16 | proventriculus anal pad salivary gland duct hindgut large intestine corpus cardiacum fat body lymph gland somatic muscle muscle sys dors prothoracic pharyngeal muscle midgut | |
| Probe source: | LD32539 (Flybase link CG10798 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal pole plasm | |
| stage4-6 | subset cellular blastoderm procephalic ectoderm AISN foregut AISN trunk mesoderm AISN head mesoderm AISN post endoderm AISN endoderm AISN ant endoderm AISN | |
| stage7-8 | foregut A trunk mesoderm PR head mesoderm PR post endoderm PR ant endoderm A | |
| stage9-10 | foregut PR salivary gland body SA trunk mesoderm PR head mesoderm PR ant endoderm PR post endoderm PR | |
| stage11-12 | foregut PR proventriculus PR tracheal PR salivary gland body PR anal pad SA hindgut proper PR trunk mesoderm PR dors pharyngeal muscle PR ant midgut PR post midgut PR | |
| stage13-16 | proventriculus salivary gland duct anal pad large intestine hindgut somatic muscle lymph gland muscle sys corpus cardiacum fat body dors prothoracic pharyngeal muscle midgut | |
| Probe source: | (Flybase link CG10798 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | cat_term:global_finito maternal pole plasm |
| stage4-6 | 
 | subset list_4-6:specific cellular blastoderm procephalic ectoderm AISN foregut AISN trunk mesoderm AISN head mesoderm AISN ant endoderm AISN endoderm AISN post endoderm AISN |
| stage7-8 | 
 | list_7-8:specific foregut A trunk mesoderm PR head mesoderm PR post endoderm PR ant endoderm A |
| stage9-10 | 
 | foregut PR salivary gland body SA trunk mesoderm PR head mesoderm PR post endoderm PR ant endoderm PR |
| stage11-12 | 
 | proventriculus PR foregut PR tracheal PR salivary gland body PR anal pad SA hindgut proper PR trunk mesoderm PR dors pharyngeal muscle PR ant midgut PR post midgut PR |
| stage13-16 | 
 | proventriculus anal pad salivary gland duct large intestine hindgut corpus cardiacum fat body somatic muscle lymph gland muscle sys dors prothoracic pharyngeal muscle midgut |
| Probe source: | GM04911 (Flybase link CG10798 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||