Annotation summary for for in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD46758-dg (Flybase link CG10033 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s
 s
 s | |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | oocyte enrichment_ubiquitous |
| stage8 |  s
 s
 s
 s
 s
 s
 s
 s | oocyte_ubiquitous oocyte |
| stage9 |  s
 s
 s
 s
 s
 s
 s
 s
 s | oocyte cytoplasmic foci |
| stage10 |  s
 s
 s
 s
 s
 s
 s
 s
 s | post restriction oocyte |
| Probe source: | GH10421-dg (Flybase link CG10033 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s | |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | oocyte enrichment_ubiquitous |
| stage8 |  s
 s | ubiquitous signal |
| stage9 |  s
 s
 s | oocyte post restriction |
| stage10 |  s
 s
 s
 s
 s
 s
 s
 s | post restriction oocyte |
| misc |  s | |
| Probe source: | LD21570-dg (Flybase link CG10033 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 | 
 | ubiquitous signal |
| stage2-7 | 
 | oocyte enrichment_ubiquitous |
| stage8 | 
 | |
| stage9 | 
 | nurse cells |
| stage10 | 
 | nurse cells |
| Probe source: | GH10421 (Flybase link CG10033 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | GM08338 (Flybase link CG10033 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for for in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | GH10421 (Flybase link CG10033 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Ubiquitous (Unlocalized) Strong expression (1-20ms exp) Stage 1-3 Expressed Maternal |
| stage4-5 | 
 | Apical exclusion Localized Pair-rule pattern Stage 4-5 Subset blastoderm nuclei Terminal-gene pattern Degraded Exclusionary patterns Zygotic starting stage 5 Blastoderm nuclei Zygotic Expressed Degraded partially stage 5 Embryonic localization patterns Degradation maternal transcripts Pole cell exclusion Segmented pattern Maternal |
| stage6-7 | 
 | Degraded completely stage 6 Zygotic Blastoderm nuclei Degraded Terminal-gene pattern Segmented pattern Subset blastoderm nuclei Pair-rule pattern Degradation maternal transcripts Stage 6-7 Expressed |
| stage8-9 | 
 | Segmented pattern Subset blastoderm nuclei Terminal-gene pattern Expressed Stage 8-9 Zygotic Blastoderm nuclei Segment polarity pattern |
| Probe source: | LD46758 (Flybase link CG10033 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Expressed Stage 1-3 Ubiquitous (Unlocalized) Annotated by Hideki Maternal |
| stage4-5 | 
 | Localized Exclusionary patterns Degraded Apical exclusion Degraded partially stage 4 Pole cell exclusion Stage 4-5 Expressed Embryonic localization patterns Maternal |
| stage6-7 | 
 | Expression in ectoderm Blastoderm nuclei Zygotic Expression in API Exclusionary patterns Localized Pole cell exclusion Pair-rule pattern Expressed Embryonic localization patterns Stage 6-7 Subset blastoderm nuclei Segmented pattern Zygotic starting stage 6 Maternal |
| stage8-9 | 
 | Zygotic Expression in API Degraded partially stage 8 Degraded Expression in ectoderm Stage 8-9 Expressed |
| Probe source: | LD21570 (Flybase link CG10033 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | GM08338 (Flybase link CG10033 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | Stage 1-3 Non-expressed No probe Annotated by Christina | |
| stage4-5 | Non-Expressed Stage 4-5 | |
| stage6-7 | Non-Expressed Stage 6-7 | |
| stage8-9 | Stage 8-9 Non-expressed | |
Annotation summary for for in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD21570-dg (Flybase link CG10033 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito maternal | |
| stage4-6 | pair rule subset foregut AISN dors ectoderm AISN vent ectoderm AISN ant endoderm AISN post endoderm AISN | |
| stage7-8 | foregut A dors ectoderm PR vent ectoderm PR post endoderm PR ant endoderm A | |
| stage9-10 | procephalic ectoderm PR visual PR foregut PR vent ectoderm PR trunk mesoderm PR ant endoderm PR post endoderm PR | |
| stage11-12 | cat_term:finito11-12 procephalon PR head epidermis dors PR P1 visual PR2 foregut PR clypeo-labral PR dors epidermis PR visceral muscle PR | |
| stage13-16 | head epidermis antennal sense organ foregut epipharynx hypopharynx tracheal sys hindgut visceral muscle | |
| Probe source: | GH10421 (Flybase link CG10033 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito maternal | |
| stage4-6 | pair rule subset foregut AISN dors ectoderm AISN vent ectoderm AISN post endoderm AISN ant endoderm AISN | |
| stage7-8 | foregut A dors ectoderm PR vent ectoderm PR ant endoderm A post endoderm PR | |
| stage9-10 | procephalic ectoderm PR visual PR foregut PR vent ectoderm PR trunk mesoderm PR post endoderm PR ant endoderm PR | |
| stage11-12 | cat_term:finito11-12 procephalon PR head epidermis dors PR P1 visual PR2 foregut PR clypeo-labral PR dors epidermis PR visceral muscle PR | |
| stage13-16 | head epidermis antennal sense organ foregut epipharynx hypopharynx tracheal sys hindgut visceral muscle | |
| Probe source: | LD46758-dg (Flybase link CG10033 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito maternal | |
| stage4-6 | list_4-6:specific subset pair rule foregut AISN dors ectoderm AISN vent ectoderm AISN post endoderm AISN ant endoderm AISN | |
| stage7-8 | list_7-8:specific foregut A dors ectoderm PR vent ectoderm PR ant endoderm A post endoderm PR | |
| stage9-10 | procephalic ectoderm PR visual PR foregut PR vent ectoderm PR trunk mesoderm PR post endoderm PR ant endoderm PR | |
| stage11-12 | cat_term:finito11-12 procephalon PR head epidermis dors PR P1 visual PR2 foregut PR clypeo-labral PR dors epidermis PR visceral muscle PR | |
| stage13-16 | head epidermis antennal sense organ foregut epipharynx hypopharynx tracheal sys hindgut visceral muscle | |
| Probe source: | GM08338 (Flybase link CG10033 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | LD21570 (Flybase link CG10033 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | LD46758 (Flybase link CG10033 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | GH10421-dg (Flybase link CG10033 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||