Annotation summary for for in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
Probe source: | LD46758-dg (Flybase link CG10033 , FlyFish insitu , BDGP insitu new) | |
stage | images | Annotation |
stage1 | ![]() ![]() ![]() ![]() ![]() ![]() | |
stage2-7 | ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() | enrichment_ubiquitous oocyte |
stage8 | ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() | oocyte oocyte_ubiquitous |
stage9 | ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() | oocyte cytoplasmic foci |
stage10 | ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() | post restriction oocyte |
Probe source: | GH10421-dg (Flybase link CG10033 , FlyFish insitu , BDGP insitu new) | |
stage | images | Annotation |
stage1 | ![]() ![]() | |
stage2-7 | ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() | enrichment_ubiquitous oocyte |
stage8 | ![]() ![]() | ubiquitous signal |
stage9 | ![]() ![]() ![]() | oocyte post restriction |
stage10 | ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() | post restriction oocyte |
misc | ![]() | |
Probe source: | LD21570-dg (Flybase link CG10033 , FlyFish insitu , BDGP insitu new) | |
stage | images | Annotation |
stage1 | ![]() ![]() ![]() | ubiquitous signal |
stage2-7 | ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() | enrichment_ubiquitous oocyte |
stage8 | ![]() ![]() ![]() ![]() ![]() ![]() ![]() | |
stage9 | ![]() ![]() ![]() ![]() | nurse cells |
stage10 | ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() | nurse cells |
Probe source: | GH10421 (Flybase link CG10033 , FlyFish insitu , BDGP insitu new) | |
No images or annotation terms | ||
Probe source: | GM08338 (Flybase link CG10033 , FlyFish insitu , BDGP insitu new) | |
No images or annotation terms | ||
Annotation summary for for in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
Probe source: | GH10421 (Flybase link CG10033 , FlyFish insitu , BDGP insitu new) | |
stage | images | Annotation |
stage1-3 | ![]() ![]() ![]() ![]() ![]() ![]() | Ubiquitous (Unlocalized) Stage 1-3 Strong expression (1-20ms exp) Expressed Maternal |
stage4-5 | ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() | Blastoderm nuclei Embryonic localization patterns Zygotic starting stage 5 Exclusionary patterns Degraded Expressed Subset blastoderm nuclei Terminal-gene pattern Apical exclusion Localized Degraded partially stage 5 Pole cell exclusion Zygotic Stage 4-5 Pair-rule pattern Degradation maternal transcripts Segmented pattern Maternal |
stage6-7 | ![]() ![]() ![]() ![]() ![]() | Terminal-gene pattern Blastoderm nuclei Degraded Zygotic Pair-rule pattern Degradation maternal transcripts Degraded completely stage 6 Segmented pattern Expressed Stage 6-7 Subset blastoderm nuclei |
stage8-9 | ![]() ![]() ![]() | Segment polarity pattern Zygotic Stage 8-9 Terminal-gene pattern Blastoderm nuclei Subset blastoderm nuclei Segmented pattern Expressed |
Probe source: | LD46758 (Flybase link CG10033 , FlyFish insitu , BDGP insitu new) | |
stage | images | Annotation |
stage1-3 | ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() | Expressed Stage 1-3 Annotated by Hideki Ubiquitous (Unlocalized) Maternal |
stage4-5 | ![]() ![]() ![]() | Expressed Localized Embryonic localization patterns Apical exclusion Stage 4-5 Pole cell exclusion Degraded Exclusionary patterns Degraded partially stage 4 Maternal |
stage6-7 | ![]() ![]() ![]() ![]() | Segmented pattern Expressed Pair-rule pattern Zygotic starting stage 6 Subset blastoderm nuclei Expression in API Stage 6-7 Embryonic localization patterns Localized Blastoderm nuclei Expression in ectoderm Zygotic Pole cell exclusion Exclusionary patterns Maternal |
stage8-9 | ![]() ![]() ![]() | Expressed Stage 8-9 Expression in ectoderm Expression in API Degraded Zygotic Degraded partially stage 8 |
Probe source: | LD21570 (Flybase link CG10033 , FlyFish insitu , BDGP insitu new) | |
No images or annotation terms | ||
Probe source: | GM08338 (Flybase link CG10033 , FlyFish insitu , BDGP insitu new) | |
stage | images | Annotation |
stage1-3 | Stage 1-3 Annotated by Christina Non-expressed No probe | |
stage4-5 | Stage 4-5 Non-Expressed | |
stage6-7 | Stage 6-7 Non-Expressed | |
stage8-9 | Stage 8-9 Non-expressed | |
Annotation summary for for in insitu
Legend: RNA signal: green, DNA staining: magenta
Probe source: | (best) LD21570-dg (Flybase link CG10033 , FlyFish insitu , BDGP insitu new) | |
stage | images | Annotation |
stage1-3 | cat_term:global_finito maternal | |
stage4-6 | pair rule subset foregut AISN dors ectoderm AISN vent ectoderm AISN ant endoderm AISN post endoderm AISN | |
stage7-8 | foregut A dors ectoderm PR vent ectoderm PR ant endoderm A post endoderm PR | |
stage9-10 | procephalic ectoderm PR visual PR foregut PR vent ectoderm PR trunk mesoderm PR ant endoderm PR post endoderm PR | |
stage11-12 | cat_term:finito11-12 procephalon PR head epidermis dors PR P1 visual PR2 foregut PR clypeo-labral PR dors epidermis PR visceral muscle PR | |
stage13-16 | head epidermis antennal sense organ foregut epipharynx hypopharynx tracheal sys hindgut visceral muscle | |
Probe source: | GH10421 (Flybase link CG10033 , FlyFish insitu , BDGP insitu new) | |
stage | images | Annotation |
stage1-3 | cat_term:global_finito maternal | |
stage4-6 | pair rule subset foregut AISN dors ectoderm AISN vent ectoderm AISN ant endoderm AISN post endoderm AISN | |
stage7-8 | foregut A dors ectoderm PR vent ectoderm PR ant endoderm A post endoderm PR | |
stage9-10 | procephalic ectoderm PR visual PR foregut PR vent ectoderm PR trunk mesoderm PR ant endoderm PR post endoderm PR | |
stage11-12 | cat_term:finito11-12 procephalon PR head epidermis dors PR P1 visual PR2 foregut PR clypeo-labral PR dors epidermis PR visceral muscle PR | |
stage13-16 | head epidermis antennal sense organ foregut epipharynx hypopharynx tracheal sys hindgut visceral muscle | |
Probe source: | LD46758-dg (Flybase link CG10033 , FlyFish insitu , BDGP insitu new) | |
stage | images | Annotation |
stage1-3 | cat_term:global_finito maternal | |
stage4-6 | subset list_4-6:specific pair rule foregut AISN dors ectoderm AISN vent ectoderm AISN ant endoderm AISN post endoderm AISN | |
stage7-8 | list_7-8:specific foregut A dors ectoderm PR vent ectoderm PR ant endoderm A post endoderm PR | |
stage9-10 | procephalic ectoderm PR visual PR foregut PR vent ectoderm PR trunk mesoderm PR ant endoderm PR post endoderm PR | |
stage11-12 | cat_term:finito11-12 procephalon PR head epidermis dors PR P1 visual PR2 foregut PR clypeo-labral PR dors epidermis PR visceral muscle PR | |
stage13-16 | head epidermis antennal sense organ foregut epipharynx hypopharynx tracheal sys hindgut visceral muscle | |
Probe source: | GM08338 (Flybase link CG10033 , FlyFish insitu , BDGP insitu new) | |
No images or annotation terms | ||
Probe source: | LD21570 (Flybase link CG10033 , FlyFish insitu , BDGP insitu new) | |
No images or annotation terms | ||
Probe source: | LD46758 (Flybase link CG10033 , FlyFish insitu , BDGP insitu new) | |
No images or annotation terms | ||
Probe source: | GH10421-dg (Flybase link CG10033 , FlyFish insitu , BDGP insitu new) | |
No images or annotation terms | ||