Annotation summary for for in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD46758-dg (Flybase link CG10033 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s
 s
 s | |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | enrichment_ubiquitous oocyte |
| stage8 |  s
 s
 s
 s
 s
 s
 s
 s | oocyte oocyte_ubiquitous |
| stage9 |  s
 s
 s
 s
 s
 s
 s
 s
 s | oocyte cytoplasmic foci |
| stage10 |  s
 s
 s
 s
 s
 s
 s
 s
 s | post restriction oocyte |
| Probe source: | GH10421-dg (Flybase link CG10033 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s | |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | enrichment_ubiquitous oocyte |
| stage8 |  s
 s | ubiquitous signal |
| stage9 |  s
 s
 s | oocyte post restriction |
| stage10 |  s
 s
 s
 s
 s
 s
 s
 s | post restriction oocyte |
| misc |  s | |
| Probe source: | LD21570-dg (Flybase link CG10033 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 | 
 | ubiquitous signal |
| stage2-7 | 
 | enrichment_ubiquitous oocyte |
| stage8 | 
 | |
| stage9 | 
 | nurse cells |
| stage10 | 
 | nurse cells |
| Probe source: | GH10421 (Flybase link CG10033 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | GM08338 (Flybase link CG10033 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for for in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | GH10421 (Flybase link CG10033 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Ubiquitous (Unlocalized) Stage 1-3 Strong expression (1-20ms exp) Expressed Maternal |
| stage4-5 | 
 | Blastoderm nuclei Embryonic localization patterns Zygotic starting stage 5 Exclusionary patterns Degraded Expressed Subset blastoderm nuclei Terminal-gene pattern Apical exclusion Localized Degraded partially stage 5 Pole cell exclusion Zygotic Stage 4-5 Pair-rule pattern Degradation maternal transcripts Segmented pattern Maternal |
| stage6-7 | 
 | Terminal-gene pattern Blastoderm nuclei Degraded Zygotic Pair-rule pattern Degradation maternal transcripts Degraded completely stage 6 Segmented pattern Expressed Stage 6-7 Subset blastoderm nuclei |
| stage8-9 | 
 | Segment polarity pattern Zygotic Stage 8-9 Terminal-gene pattern Blastoderm nuclei Subset blastoderm nuclei Segmented pattern Expressed |
| Probe source: | LD46758 (Flybase link CG10033 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Expressed Stage 1-3 Annotated by Hideki Ubiquitous (Unlocalized) Maternal |
| stage4-5 | 
 | Expressed Localized Embryonic localization patterns Apical exclusion Stage 4-5 Pole cell exclusion Degraded Exclusionary patterns Degraded partially stage 4 Maternal |
| stage6-7 | 
 | Segmented pattern Expressed Pair-rule pattern Zygotic starting stage 6 Subset blastoderm nuclei Expression in API Stage 6-7 Embryonic localization patterns Localized Blastoderm nuclei Expression in ectoderm Zygotic Pole cell exclusion Exclusionary patterns Maternal |
| stage8-9 | 
 | Expressed Stage 8-9 Expression in ectoderm Expression in API Degraded Zygotic Degraded partially stage 8 |
| Probe source: | LD21570 (Flybase link CG10033 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | GM08338 (Flybase link CG10033 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | Stage 1-3 Annotated by Christina Non-expressed No probe | |
| stage4-5 | Stage 4-5 Non-Expressed | |
| stage6-7 | Stage 6-7 Non-Expressed | |
| stage8-9 | Stage 8-9 Non-expressed | |
Annotation summary for for in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD21570-dg (Flybase link CG10033 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito maternal | |
| stage4-6 | pair rule subset foregut AISN dors ectoderm AISN vent ectoderm AISN ant endoderm AISN post endoderm AISN | |
| stage7-8 | foregut A dors ectoderm PR vent ectoderm PR ant endoderm A post endoderm PR | |
| stage9-10 | procephalic ectoderm PR visual PR foregut PR vent ectoderm PR trunk mesoderm PR ant endoderm PR post endoderm PR | |
| stage11-12 | cat_term:finito11-12 procephalon PR head epidermis dors PR P1 visual PR2 foregut PR clypeo-labral PR dors epidermis PR visceral muscle PR | |
| stage13-16 | head epidermis antennal sense organ foregut epipharynx hypopharynx tracheal sys hindgut visceral muscle | |
| Probe source: | GH10421 (Flybase link CG10033 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito maternal | |
| stage4-6 | pair rule subset foregut AISN dors ectoderm AISN vent ectoderm AISN ant endoderm AISN post endoderm AISN | |
| stage7-8 | foregut A dors ectoderm PR vent ectoderm PR ant endoderm A post endoderm PR | |
| stage9-10 | procephalic ectoderm PR visual PR foregut PR vent ectoderm PR trunk mesoderm PR ant endoderm PR post endoderm PR | |
| stage11-12 | cat_term:finito11-12 procephalon PR head epidermis dors PR P1 visual PR2 foregut PR clypeo-labral PR dors epidermis PR visceral muscle PR | |
| stage13-16 | head epidermis antennal sense organ foregut epipharynx hypopharynx tracheal sys hindgut visceral muscle | |
| Probe source: | LD46758-dg (Flybase link CG10033 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito maternal | |
| stage4-6 | subset list_4-6:specific pair rule foregut AISN dors ectoderm AISN vent ectoderm AISN ant endoderm AISN post endoderm AISN | |
| stage7-8 | list_7-8:specific foregut A dors ectoderm PR vent ectoderm PR ant endoderm A post endoderm PR | |
| stage9-10 | procephalic ectoderm PR visual PR foregut PR vent ectoderm PR trunk mesoderm PR ant endoderm PR post endoderm PR | |
| stage11-12 | cat_term:finito11-12 procephalon PR head epidermis dors PR P1 visual PR2 foregut PR clypeo-labral PR dors epidermis PR visceral muscle PR | |
| stage13-16 | head epidermis antennal sense organ foregut epipharynx hypopharynx tracheal sys hindgut visceral muscle | |
| Probe source: | GM08338 (Flybase link CG10033 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | LD21570 (Flybase link CG10033 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | LD46758 (Flybase link CG10033 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | GH10421-dg (Flybase link CG10033 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||