Annotation summary for Ect4 in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | GH20978-dg (Flybase link CG7915 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s | ubiquitous signal |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | enrichment_ubiquitous oocyte |
| stage8 |  s
 s
 s
 s
 s | oocyte_ubiquitous oocyte |
| stage9 |  s
 s
 s
 s
 s
 s
 s
 s | post restriction oocyte |
| stage10 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s | post restriction follicle cells nuclear foci somatic cells oocyte squamous follicle cells |
Annotation summary for Ect4 in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | GH20978 (Flybase link CG7915 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Annotated by Ronit Cytoplasmic foci Stage 1-3 Embryonic localization patterns Weak expression (>41ms exp) Perinuclear localization Expressed Pole buds Nuclei associated localization Perinuclear around pole cell nuclei Subcellular localization patterns Localized Maternal |
| stage4-5 | 
 | Nuclei-associated localization Expressed All yolk nuclei Perinuclear around yolk nuclei Zygotic Pole cell localization Exclusionary patterns Weak expression (>41ms exp) Perinuclear localization Embryonic localization patterns Localized Subcellular localization patterns Apical exclusion Stage 4-5 Zygotic starting stage 4 Yolk nuclei |
| stage6-7 | 
 | Stage 6-7 Weak expression (>41ms exp) Perinuclear localization Perinuclear around yolk nuclei Expressed Subcellular localization patterns Localized Nuclei-associated localization |
| stage8-9 |  | Zygotic Subset blastoderm nuclei Expresssion in amnioserosa Expressed Blastoderm nuclei Stage 8-9 |
| stage10- | 
 | post spiracles Specific visceral mesoderm pattern Tracheal sys Subcellular localization patterns Localized Salivary glands lumen Expressed Stage 10- PNS Zygotic Salivary glands Visceral mesoderm Tracheal lumen Sensory sys Yolk nuclei |
| Probe source: | GH07037 (Flybase link CG7915 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 |  | Expressed Annotated by Ronit Stage 1-3 Ubiquitous (Unlocalized) Weak expression (>41ms exp) Maternal |
| stage4-5 | 
 | Blastoderm nuclei Degradation maternal transcripts Degraded Degraded partially stage 4 Subset blastoderm nuclei Zygotic Degraded completely stage 5 Stage 4-5 dors blastoderm nuclei Expressed Zygotic starting stage 5 |
| stage6-7 | 
 | Cytoplasmic foci Stage 6-7 Embryonic localization patterns Weak expression (>41ms exp) Apical localization Expressed dors blastoderm nuclei Basal enrichment Basal localization Localized Subcellular localization patterns |
| stage8-9 | 
 | Weak expression (>41ms exp) Zygotic Subset blastoderm nuclei Cytoplasmic foci Expresssion in amnioserosa Stage 8-9 Blastoderm nuclei Localized Subcellular localization patterns Expressed |
| stage10- | 
 | Tracheal lumen Midgut Ectoderm Zygotic Hindgut Stage 10- Expressed Localized Tracheal sys post spiracles Midgut subset Amnioserosa |
Annotation summary for Ect4 in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) GH20978-dg (Flybase link CG7915 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal pole plasm | |
| stage4-6 | AISN list_4-6:specific dors ectoderm AISN amnioserosa AISN | |
| stage7-8 | list_7-8:specific dors ectoderm PR hindgut A amnioserosa A | |
| stage9-10 | amnioserosa PR | |
| stage11-12 | faint ubiquitous head epidermis PR P1 foregut PR post spiracle SA dors epidermis PR leading edge cell SA vent epidermis PR hindgut proper PR | |
| stage13-16 | faint ubiquitous head epidermis proventriculus foregut epipharynx leading edge cell dors epidermis post spiracle vent epidermis hindgut muscle sys midgut | |
| Probe source: | GH20978 (Flybase link CG7915 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal pole plasm | |
| stage4-6 | dors ectoderm AISN amnioserosa AISN | |
| stage7-8 | dors ectoderm PR hindgut A amnioserosa A | |
| stage9-10 | amnioserosa PR | |
| stage11-12 | faint ubiquitous head epidermis PR P1 foregut PR leading edge cell SA dors epidermis PR post spiracle SA vent epidermis PR hindgut proper PR | |
| stage13-16 | faint ubiquitous head epidermis foregut proventriculus epipharynx dors epidermis post spiracle leading edge cell vent epidermis hindgut muscle sys midgut | |
| Probe source: | GH07037 (Flybase link CG7915 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||