Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | oocyte ant follicle cells post follicle cells enrichment_ubiquitous somatic cells interfollicular stalk cells |
| stage8 |  s
 s
 s
 s
 s | somatic cells post follicle cells cytoplasmic foci oocyte ant follicle cells germline cells_ubiquitous |
| stage9 |  s
 s
 s
 s
 s | germline cells_ubiquitous follicle cells_ubiquitous somatic cells follicle cells |
| stage10 |  s
 s
 s
 s
 s
 s | germline cells_ubiquitous somatic cells follicle cells_ubiquitous follicle cells |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Localized Annotated by Eric Yolk cortex exclusion Embryonic localization patterns Stage 1-3 Expressed Exclusionary patterns Medium expression (21-40ms exp) Maternal |
| stage4-5 | 
 | Localized Degraded Perinuclear subset of nuclei Subcellular localization patterns Intranuclear accumulation Perinuclear localization Blastoderm nuclei Expressed Degraded completely stage 5 Stage 4-5 Degradation maternal transcripts Perinuclear around blastoderm nuclei Subset blastoderm nuclei Nuclei-associated localization Embryonic localization patterns Zygotic Apical exclusion Pole cell exclusion post blastoderm nuclei vent blastoderm nuclei Accumlation in subset nuclei Local terms for zyg transcripts Degraded partially stage 4 Exclusionary patterns Accumlation entire nucleus Maternal |
| stage6-7 | 
 | Localized Subset blastoderm nuclei Nuclei-associated localization Zygotic Subcellular localization patterns post blastoderm nuclei Stage 6-7 vent blastoderm nuclei Blastoderm nuclei Local terms for zyg transcripts Intranuclear accumulation Accumlation in subset nuclei Expressed Accumlation entire nucleus |
| stage8-9 | 
 | Nuclei-associated localization Segmented pattern Zygotic Subcellular localization patterns Localized Subset blastoderm nuclei Stage 8-9 Local terms for zyg transcripts Blastoderm nuclei Accumlation in subset nuclei Intranuclear accumulation Accumlation entire nucleus Expressed |
| stage10- | 
 | CNS Subcellular localization patterns Zygotic Localized Blastoderm nuclei Expressed Head Stage 10- Brain Sensory sys vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | gap list_4-6:specific faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap list_7-8:specific vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||