Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | post follicle cells enrichment_ubiquitous oocyte interfollicular stalk cells somatic cells ant follicle cells |
| stage8 |  s
 s
 s
 s
 s | cytoplasmic foci post follicle cells ant follicle cells somatic cells germline cells_ubiquitous oocyte |
| stage9 |  s
 s
 s
 s
 s | follicle cells germline cells_ubiquitous somatic cells follicle cells_ubiquitous |
| stage10 |  s
 s
 s
 s
 s
 s | follicle cells_ubiquitous somatic cells germline cells_ubiquitous follicle cells |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Embryonic localization patterns Annotated by Eric Stage 1-3 Exclusionary patterns Expressed Yolk cortex exclusion Localized Medium expression (21-40ms exp) Maternal |
| stage4-5 | 
 | Degraded partially stage 4 Blastoderm nuclei Degraded Intranuclear accumulation Accumlation entire nucleus vent blastoderm nuclei Expressed Subcellular localization patterns Perinuclear subset of nuclei Perinuclear around blastoderm nuclei Pole cell exclusion Nuclei-associated localization Embryonic localization patterns Local terms for zyg transcripts Subset blastoderm nuclei Accumlation in subset nuclei Apical exclusion Localized Degradation maternal transcripts Zygotic Exclusionary patterns Stage 4-5 Degraded completely stage 5 Perinuclear localization post blastoderm nuclei Maternal |
| stage6-7 | 
 | Intranuclear accumulation Blastoderm nuclei Zygotic Stage 6-7 Accumlation in subset nuclei Localized Subset blastoderm nuclei Local terms for zyg transcripts Nuclei-associated localization post blastoderm nuclei Subcellular localization patterns Accumlation entire nucleus vent blastoderm nuclei Expressed |
| stage8-9 | 
 | Subcellular localization patterns Expressed Accumlation entire nucleus Nuclei-associated localization Subset blastoderm nuclei Local terms for zyg transcripts Localized Accumlation in subset nuclei Stage 8-9 Intranuclear accumulation Blastoderm nuclei Segmented pattern Zygotic |
| stage10- | 
 | Subcellular localization patterns Expressed Stage 10- Brain Localized Head Blastoderm nuclei Sensory sys Zygotic CNS vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | faint ubiquitous gap list_4-6:specific vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | list_7-8:specific gap vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||