Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | enrichment_ubiquitous interfollicular stalk cells somatic cells oocyte ant follicle cells post follicle cells |
| stage8 |  s
 s
 s
 s
 s | oocyte ant follicle cells post follicle cells cytoplasmic foci somatic cells germline cells_ubiquitous |
| stage9 |  s
 s
 s
 s
 s | follicle cells somatic cells follicle cells_ubiquitous germline cells_ubiquitous |
| stage10 |  s
 s
 s
 s
 s
 s | follicle cells somatic cells follicle cells_ubiquitous germline cells_ubiquitous |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Localized Expressed Embryonic localization patterns Stage 1-3 Yolk cortex exclusion Exclusionary patterns Medium expression (21-40ms exp) Annotated by Eric Maternal |
| stage4-5 | 
 | Pole cell exclusion Degraded completely stage 5 Blastoderm nuclei Nuclei-associated localization Perinuclear subset of nuclei Accumlation in subset nuclei vent blastoderm nuclei Perinuclear localization Zygotic post blastoderm nuclei Subset blastoderm nuclei Exclusionary patterns Degradation maternal transcripts Local terms for zyg transcripts Degraded Perinuclear around blastoderm nuclei Accumlation entire nucleus Expressed Apical exclusion Embryonic localization patterns Intranuclear accumulation Localized Degraded partially stage 4 Subcellular localization patterns Stage 4-5 Maternal |
| stage6-7 | 
 | Blastoderm nuclei Nuclei-associated localization Local terms for zyg transcripts Accumlation in subset nuclei Accumlation entire nucleus vent blastoderm nuclei Expressed Zygotic Intranuclear accumulation Localized Subcellular localization patterns post blastoderm nuclei Stage 6-7 Subset blastoderm nuclei |
| stage8-9 | 
 | Accumlation entire nucleus Accumlation in subset nuclei Nuclei-associated localization Local terms for zyg transcripts Blastoderm nuclei Subset blastoderm nuclei Subcellular localization patterns Stage 8-9 Segmented pattern Localized Intranuclear accumulation Zygotic Expressed |
| stage10- | 
 | CNS Blastoderm nuclei Brain Sensory sys Stage 10- Subcellular localization patterns Zygotic Expressed Localized Head vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | list_4-6:specific faint ubiquitous gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap list_7-8:specific vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | faint ubiquitous gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||