Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | interfollicular stalk cells ant follicle cells post follicle cells enrichment_ubiquitous somatic cells oocyte |
| stage8 |  s
 s
 s
 s
 s | oocyte somatic cells cytoplasmic foci post follicle cells ant follicle cells germline cells_ubiquitous |
| stage9 |  s
 s
 s
 s
 s | follicle cells_ubiquitous follicle cells somatic cells germline cells_ubiquitous |
| stage10 |  s
 s
 s
 s
 s
 s | germline cells_ubiquitous follicle cells follicle cells_ubiquitous somatic cells |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Exclusionary patterns Medium expression (21-40ms exp) Annotated by Eric Yolk cortex exclusion Localized Expressed Embryonic localization patterns Stage 1-3 Maternal |
| stage4-5 | 
 | post blastoderm nuclei Accumlation entire nucleus Zygotic Perinuclear around blastoderm nuclei Expressed Degraded completely stage 5 Apical exclusion Perinuclear localization Stage 4-5 Pole cell exclusion Localized vent blastoderm nuclei Local terms for zyg transcripts Perinuclear subset of nuclei Exclusionary patterns Blastoderm nuclei Intranuclear accumulation Degraded Degradation maternal transcripts Subcellular localization patterns Nuclei-associated localization Embryonic localization patterns Accumlation in subset nuclei Subset blastoderm nuclei Degraded partially stage 4 Maternal |
| stage6-7 | 
 | Intranuclear accumulation Blastoderm nuclei Stage 6-7 Localized vent blastoderm nuclei Local terms for zyg transcripts Expressed Subset blastoderm nuclei Accumlation in subset nuclei Accumlation entire nucleus post blastoderm nuclei Subcellular localization patterns Nuclei-associated localization Zygotic |
| stage8-9 | 
 | Zygotic Nuclei-associated localization Subcellular localization patterns Accumlation entire nucleus Segmented pattern Subset blastoderm nuclei Accumlation in subset nuclei Expressed Stage 8-9 Local terms for zyg transcripts Localized Intranuclear accumulation Blastoderm nuclei |
| stage10- | 
 | Localized Brain CNS Blastoderm nuclei Sensory sys Stage 10- Subcellular localization patterns Zygotic Expressed Head vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | list_4-6:specific faint ubiquitous gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | list_7-8:specific vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||