Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | enrichment_ubiquitous somatic cells ant follicle cells post follicle cells oocyte interfollicular stalk cells |
| stage8 |  s
 s
 s
 s
 s | cytoplasmic foci oocyte post follicle cells ant follicle cells somatic cells germline cells_ubiquitous |
| stage9 |  s
 s
 s
 s
 s | somatic cells germline cells_ubiquitous follicle cells_ubiquitous follicle cells |
| stage10 |  s
 s
 s
 s
 s
 s | somatic cells follicle cells_ubiquitous germline cells_ubiquitous follicle cells |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Stage 1-3 Medium expression (21-40ms exp) Localized Annotated by Eric Embryonic localization patterns Yolk cortex exclusion Exclusionary patterns Expressed Maternal |
| stage4-5 | 
 | Pole cell exclusion Blastoderm nuclei Subcellular localization patterns Perinuclear subset of nuclei Nuclei-associated localization Localized Perinuclear around blastoderm nuclei vent blastoderm nuclei Degraded Subset blastoderm nuclei Stage 4-5 Degradation maternal transcripts Accumlation in subset nuclei Zygotic Apical exclusion Expressed Accumlation entire nucleus Degraded completely stage 5 Embryonic localization patterns Intranuclear accumulation Perinuclear localization Local terms for zyg transcripts Degraded partially stage 4 Exclusionary patterns post blastoderm nuclei Maternal |
| stage6-7 | 
 | Zygotic Accumlation in subset nuclei Stage 6-7 Nuclei-associated localization Expressed Blastoderm nuclei Subcellular localization patterns vent blastoderm nuclei Localized Accumlation entire nucleus post blastoderm nuclei Subset blastoderm nuclei Local terms for zyg transcripts Intranuclear accumulation |
| stage8-9 | 
 | Accumlation in subset nuclei Zygotic Stage 8-9 Nuclei-associated localization Segmented pattern Blastoderm nuclei Subcellular localization patterns Expressed Accumlation entire nucleus Localized Subset blastoderm nuclei Intranuclear accumulation Local terms for zyg transcripts |
| stage10- | 
 | Blastoderm nuclei Subcellular localization patterns Stage 10- Expressed Brain Sensory sys Zygotic Head CNS Localized vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | list_4-6:specific faint ubiquitous gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap vent nerve cord A list_7-8:specific vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||