Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | enrichment_ubiquitous ant follicle cells post follicle cells interfollicular stalk cells oocyte somatic cells |
| stage8 |  s
 s
 s
 s
 s | ant follicle cells cytoplasmic foci post follicle cells oocyte germline cells_ubiquitous somatic cells |
| stage9 |  s
 s
 s
 s
 s | follicle cells_ubiquitous somatic cells follicle cells germline cells_ubiquitous |
| stage10 |  s
 s
 s
 s
 s
 s | follicle cells_ubiquitous somatic cells follicle cells germline cells_ubiquitous |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Embryonic localization patterns Stage 1-3 Annotated by Eric Yolk cortex exclusion Medium expression (21-40ms exp) Expressed Localized Exclusionary patterns Maternal |
| stage4-5 | 
 | Degradation maternal transcripts Accumlation in subset nuclei Stage 4-5 Degraded partially stage 4 post blastoderm nuclei Accumlation entire nucleus Degraded Nuclei-associated localization Degraded completely stage 5 Perinuclear localization Expressed Subcellular localization patterns Zygotic Localized Pole cell exclusion Apical exclusion Local terms for zyg transcripts Perinuclear subset of nuclei Exclusionary patterns Perinuclear around blastoderm nuclei Embryonic localization patterns vent blastoderm nuclei Blastoderm nuclei Intranuclear accumulation Subset blastoderm nuclei Maternal |
| stage6-7 | 
 | Localized Stage 6-7 Subcellular localization patterns Zygotic Accumlation in subset nuclei Local terms for zyg transcripts post blastoderm nuclei vent blastoderm nuclei Accumlation entire nucleus Blastoderm nuclei Expressed Intranuclear accumulation Subset blastoderm nuclei Nuclei-associated localization |
| stage8-9 | 
 | Stage 8-9 Localized Zygotic Accumlation in subset nuclei Subcellular localization patterns Local terms for zyg transcripts Segmented pattern Accumlation entire nucleus Subset blastoderm nuclei Intranuclear accumulation Expressed Blastoderm nuclei Nuclei-associated localization |
| stage10- | 
 | Zygotic Subcellular localization patterns Head Localized Brain CNS Stage 10- Sensory sys Expressed Blastoderm nuclei vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | gap faint ubiquitous list_4-6:specific vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap list_7-8:specific vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | faint ubiquitous gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||