Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | interfollicular stalk cells oocyte post follicle cells somatic cells enrichment_ubiquitous ant follicle cells |
| stage8 |  s
 s
 s
 s
 s | germline cells_ubiquitous oocyte somatic cells post follicle cells ant follicle cells cytoplasmic foci |
| stage9 |  s
 s
 s
 s
 s | follicle cells follicle cells_ubiquitous germline cells_ubiquitous somatic cells |
| stage10 |  s
 s
 s
 s
 s
 s | somatic cells follicle cells_ubiquitous germline cells_ubiquitous follicle cells |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Localized Stage 1-3 Yolk cortex exclusion Exclusionary patterns Annotated by Eric Embryonic localization patterns Expressed Medium expression (21-40ms exp) Maternal |
| stage4-5 | 
 | Zygotic Expressed Embryonic localization patterns Degraded completely stage 5 Nuclei-associated localization vent blastoderm nuclei Degraded Blastoderm nuclei Degraded partially stage 4 Accumlation in subset nuclei Perinuclear around blastoderm nuclei Localized Perinuclear subset of nuclei Apical exclusion post blastoderm nuclei Accumlation entire nucleus Intranuclear accumulation Exclusionary patterns Subset blastoderm nuclei Perinuclear localization Local terms for zyg transcripts Subcellular localization patterns Stage 4-5 Pole cell exclusion Degradation maternal transcripts Maternal |
| stage6-7 | 
 | Localized Stage 6-7 Accumlation in subset nuclei Subcellular localization patterns Local terms for zyg transcripts Blastoderm nuclei vent blastoderm nuclei Subset blastoderm nuclei Nuclei-associated localization Intranuclear accumulation post blastoderm nuclei Zygotic Accumlation entire nucleus Expressed |
| stage8-9 | 
 | Accumlation entire nucleus Zygotic Expressed Subset blastoderm nuclei Intranuclear accumulation Nuclei-associated localization Accumlation in subset nuclei Segmented pattern Stage 8-9 Local terms for zyg transcripts Subcellular localization patterns Blastoderm nuclei Localized |
| stage10- | 
 | Head Zygotic Expressed Stage 10- Sensory sys Blastoderm nuclei CNS Subcellular localization patterns Brain Localized vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | list_4-6:specific gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | list_7-8:specific vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | faint ubiquitous gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||