Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | enrichment_ubiquitous post follicle cells somatic cells interfollicular stalk cells ant follicle cells oocyte |
| stage8 |  s
 s
 s
 s
 s | post follicle cells cytoplasmic foci somatic cells ant follicle cells germline cells_ubiquitous oocyte |
| stage9 |  s
 s
 s
 s
 s | somatic cells germline cells_ubiquitous follicle cells_ubiquitous follicle cells |
| stage10 |  s
 s
 s
 s
 s
 s | follicle cells_ubiquitous follicle cells germline cells_ubiquitous somatic cells |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Exclusionary patterns Medium expression (21-40ms exp) Yolk cortex exclusion Stage 1-3 Expressed Localized Annotated by Eric Embryonic localization patterns Maternal |
| stage4-5 | 
 | Expressed Intranuclear accumulation Exclusionary patterns post blastoderm nuclei Degraded Degraded partially stage 4 Embryonic localization patterns vent blastoderm nuclei Degradation maternal transcripts Nuclei-associated localization Stage 4-5 Zygotic Localized Perinuclear around blastoderm nuclei Local terms for zyg transcripts Subset blastoderm nuclei Accumlation entire nucleus Perinuclear subset of nuclei Perinuclear localization Degraded completely stage 5 Blastoderm nuclei Pole cell exclusion Apical exclusion Subcellular localization patterns Accumlation in subset nuclei Maternal |
| stage6-7 | 
 | Accumlation in subset nuclei Subcellular localization patterns Stage 6-7 Nuclei-associated localization vent blastoderm nuclei Blastoderm nuclei post blastoderm nuclei Zygotic Local terms for zyg transcripts Intranuclear accumulation Accumlation entire nucleus Subset blastoderm nuclei Expressed Localized |
| stage8-9 | 
 | Zygotic Intranuclear accumulation Local terms for zyg transcripts Accumlation entire nucleus Stage 8-9 Subset blastoderm nuclei Localized Expressed Blastoderm nuclei Nuclei-associated localization Segmented pattern Accumlation in subset nuclei Subcellular localization patterns |
| stage10- | 
 | Zygotic Expressed Localized Head Blastoderm nuclei Brain CNS Stage 10- Sensory sys Subcellular localization patterns vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | list_4-6:specific gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | list_7-8:specific vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||