Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | enrichment_ubiquitous interfollicular stalk cells ant follicle cells post follicle cells oocyte somatic cells |
| stage8 |  s
 s
 s
 s
 s | somatic cells oocyte germline cells_ubiquitous post follicle cells ant follicle cells cytoplasmic foci |
| stage9 |  s
 s
 s
 s
 s | somatic cells follicle cells_ubiquitous follicle cells germline cells_ubiquitous |
| stage10 |  s
 s
 s
 s
 s
 s | somatic cells germline cells_ubiquitous follicle cells_ubiquitous follicle cells |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Embryonic localization patterns Stage 1-3 Exclusionary patterns Localized Medium expression (21-40ms exp) Expressed Yolk cortex exclusion Annotated by Eric Maternal |
| stage4-5 | 
 | Nuclei-associated localization Accumlation in subset nuclei Degradation maternal transcripts Stage 4-5 Subcellular localization patterns Perinuclear around blastoderm nuclei Exclusionary patterns Perinuclear localization Subset blastoderm nuclei Apical exclusion Zygotic Degraded partially stage 4 Pole cell exclusion Blastoderm nuclei Perinuclear subset of nuclei Accumlation entire nucleus Expressed Embryonic localization patterns Intranuclear accumulation Localized vent blastoderm nuclei post blastoderm nuclei Local terms for zyg transcripts Degraded Degraded completely stage 5 Maternal |
| stage6-7 | 
 | Accumlation in subset nuclei Accumlation entire nucleus Nuclei-associated localization Expressed Intranuclear accumulation Subcellular localization patterns Localized post blastoderm nuclei Subset blastoderm nuclei vent blastoderm nuclei Zygotic Stage 6-7 Local terms for zyg transcripts Blastoderm nuclei |
| stage8-9 | 
 | Local terms for zyg transcripts Blastoderm nuclei Segmented pattern Subset blastoderm nuclei Zygotic Intranuclear accumulation Subcellular localization patterns Stage 8-9 Localized Accumlation in subset nuclei Accumlation entire nucleus Nuclei-associated localization Expressed |
| stage10- | 
 | Sensory sys Stage 10- Head Blastoderm nuclei CNS Zygotic Subcellular localization patterns Brain Localized Expressed vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | gap faint ubiquitous list_4-6:specific vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap vent nerve cord A list_7-8:specific vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||