Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | ant follicle cells enrichment_ubiquitous post follicle cells oocyte somatic cells interfollicular stalk cells |
| stage8 |  s
 s
 s
 s
 s | ant follicle cells germline cells_ubiquitous post follicle cells oocyte somatic cells cytoplasmic foci |
| stage9 |  s
 s
 s
 s
 s | somatic cells follicle cells germline cells_ubiquitous follicle cells_ubiquitous |
| stage10 |  s
 s
 s
 s
 s
 s | follicle cells_ubiquitous germline cells_ubiquitous follicle cells somatic cells |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Exclusionary patterns Expressed Localized Annotated by Eric Stage 1-3 Yolk cortex exclusion Medium expression (21-40ms exp) Embryonic localization patterns Maternal |
| stage4-5 | 
 | Intranuclear accumulation Perinuclear around blastoderm nuclei Degraded completely stage 5 Perinuclear localization Degraded Subset blastoderm nuclei Subcellular localization patterns Expressed Zygotic Blastoderm nuclei Degraded partially stage 4 Degradation maternal transcripts Pole cell exclusion Apical exclusion Exclusionary patterns Embryonic localization patterns post blastoderm nuclei Perinuclear subset of nuclei Accumlation in subset nuclei Nuclei-associated localization Localized vent blastoderm nuclei Local terms for zyg transcripts Stage 4-5 Accumlation entire nucleus Maternal |
| stage6-7 | 
 | Stage 6-7 Intranuclear accumulation post blastoderm nuclei vent blastoderm nuclei Blastoderm nuclei Localized Accumlation in subset nuclei Expressed Nuclei-associated localization Zygotic Subset blastoderm nuclei Subcellular localization patterns Accumlation entire nucleus Local terms for zyg transcripts |
| stage8-9 | 
 | Intranuclear accumulation Stage 8-9 Segmented pattern Subset blastoderm nuclei Subcellular localization patterns Blastoderm nuclei Accumlation in subset nuclei Localized Nuclei-associated localization Expressed Zygotic Accumlation entire nucleus Local terms for zyg transcripts |
| stage10- | 
 | Stage 10- Head Brain CNS Subcellular localization patterns Blastoderm nuclei Sensory sys Zygotic Expressed Localized vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | gap list_4-6:specific faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | list_7-8:specific vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | faint ubiquitous gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||