Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | somatic cells interfollicular stalk cells enrichment_ubiquitous ant follicle cells post follicle cells oocyte |
| stage8 |  s
 s
 s
 s
 s | post follicle cells ant follicle cells germline cells_ubiquitous oocyte cytoplasmic foci somatic cells |
| stage9 |  s
 s
 s
 s
 s | somatic cells follicle cells_ubiquitous germline cells_ubiquitous follicle cells |
| stage10 |  s
 s
 s
 s
 s
 s | follicle cells germline cells_ubiquitous follicle cells_ubiquitous somatic cells |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Expressed Yolk cortex exclusion Embryonic localization patterns Stage 1-3 Localized Medium expression (21-40ms exp) Annotated by Eric Exclusionary patterns Maternal |
| stage4-5 | 
 | Degradation maternal transcripts Embryonic localization patterns Local terms for zyg transcripts Accumlation in subset nuclei Nuclei-associated localization Perinuclear subset of nuclei Localized Subset blastoderm nuclei Degraded Intranuclear accumulation Perinuclear around blastoderm nuclei Accumlation entire nucleus Exclusionary patterns Zygotic Expressed Apical exclusion post blastoderm nuclei Perinuclear localization Degraded completely stage 5 Pole cell exclusion Subcellular localization patterns Blastoderm nuclei Stage 4-5 vent blastoderm nuclei Degraded partially stage 4 Maternal |
| stage6-7 | 
 | Zygotic Local terms for zyg transcripts Accumlation entire nucleus Intranuclear accumulation Subset blastoderm nuclei Localized vent blastoderm nuclei Nuclei-associated localization Blastoderm nuclei Stage 6-7 Subcellular localization patterns Accumlation in subset nuclei post blastoderm nuclei Expressed |
| stage8-9 | 
 | Localized Subset blastoderm nuclei Stage 8-9 Segmented pattern Intranuclear accumulation Accumlation entire nucleus Local terms for zyg transcripts Zygotic Expressed Accumlation in subset nuclei Subcellular localization patterns Blastoderm nuclei Nuclei-associated localization |
| stage10- | 
 | Expressed Blastoderm nuclei Subcellular localization patterns Head Localized Zygotic CNS Sensory sys Stage 10- Brain vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | faint ubiquitous gap list_4-6:specific vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | list_7-8:specific vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | faint ubiquitous gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||