Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | somatic cells ant follicle cells enrichment_ubiquitous interfollicular stalk cells oocyte post follicle cells |
| stage8 |  s
 s
 s
 s
 s | oocyte cytoplasmic foci post follicle cells germline cells_ubiquitous ant follicle cells somatic cells |
| stage9 |  s
 s
 s
 s
 s | follicle cells_ubiquitous germline cells_ubiquitous somatic cells follicle cells |
| stage10 |  s
 s
 s
 s
 s
 s | follicle cells somatic cells germline cells_ubiquitous follicle cells_ubiquitous |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Yolk cortex exclusion Exclusionary patterns Annotated by Eric Localized Stage 1-3 Medium expression (21-40ms exp) Expressed Embryonic localization patterns Maternal |
| stage4-5 | 
 | Degraded Perinuclear around blastoderm nuclei Subcellular localization patterns post blastoderm nuclei Accumlation entire nucleus Subset blastoderm nuclei Pole cell exclusion Zygotic Degradation maternal transcripts Apical exclusion Exclusionary patterns Perinuclear localization vent blastoderm nuclei Localized Accumlation in subset nuclei Local terms for zyg transcripts Embryonic localization patterns Nuclei-associated localization Degraded completely stage 5 Expressed Intranuclear accumulation Blastoderm nuclei Stage 4-5 Perinuclear subset of nuclei Degraded partially stage 4 Maternal |
| stage6-7 | 
 | Blastoderm nuclei Intranuclear accumulation Subset blastoderm nuclei Zygotic Localized Accumlation in subset nuclei Subcellular localization patterns vent blastoderm nuclei post blastoderm nuclei Accumlation entire nucleus Expressed Local terms for zyg transcripts Nuclei-associated localization Stage 6-7 |
| stage8-9 | 
 | Segmented pattern Zygotic Subset blastoderm nuclei Intranuclear accumulation Stage 8-9 Blastoderm nuclei Local terms for zyg transcripts Nuclei-associated localization Expressed Accumlation entire nucleus Subcellular localization patterns Accumlation in subset nuclei Localized |
| stage10- | 
 | Stage 10- Expressed Brain Localized Subcellular localization patterns Sensory sys Zygotic Head Blastoderm nuclei CNS vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | list_4-6:specific gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | list_7-8:specific vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | faint ubiquitous gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||