Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | somatic cells enrichment_ubiquitous interfollicular stalk cells ant follicle cells post follicle cells oocyte |
| stage8 |  s
 s
 s
 s
 s | germline cells_ubiquitous oocyte post follicle cells ant follicle cells cytoplasmic foci somatic cells |
| stage9 |  s
 s
 s
 s
 s | somatic cells follicle cells_ubiquitous germline cells_ubiquitous follicle cells |
| stage10 |  s
 s
 s
 s
 s
 s | somatic cells germline cells_ubiquitous follicle cells_ubiquitous follicle cells |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Yolk cortex exclusion Exclusionary patterns Annotated by Eric Embryonic localization patterns Expressed Medium expression (21-40ms exp) Localized Stage 1-3 Maternal |
| stage4-5 | 
 | Expressed Blastoderm nuclei Accumlation entire nucleus post blastoderm nuclei Localized Degraded partially stage 4 Nuclei-associated localization Subcellular localization patterns Zygotic Pole cell exclusion Stage 4-5 Degradation maternal transcripts Accumlation in subset nuclei Embryonic localization patterns Degraded completely stage 5 Apical exclusion Degraded Perinuclear around blastoderm nuclei Exclusionary patterns vent blastoderm nuclei Intranuclear accumulation Perinuclear subset of nuclei Local terms for zyg transcripts Perinuclear localization Subset blastoderm nuclei Maternal |
| stage6-7 | 
 | Zygotic Subcellular localization patterns Subset blastoderm nuclei Nuclei-associated localization Local terms for zyg transcripts Localized post blastoderm nuclei Accumlation in subset nuclei Stage 6-7 Expressed Intranuclear accumulation vent blastoderm nuclei Accumlation entire nucleus Blastoderm nuclei |
| stage8-9 | 
 | Accumlation entire nucleus Blastoderm nuclei Segmented pattern Intranuclear accumulation Expressed Stage 8-9 Accumlation in subset nuclei Local terms for zyg transcripts Nuclei-associated localization Localized Subcellular localization patterns Subset blastoderm nuclei Zygotic |
| stage10- | 
 | Subcellular localization patterns Zygotic Localized Head Brain CNS Expressed Stage 10- Blastoderm nuclei Sensory sys vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | faint ubiquitous gap list_4-6:specific vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap vent nerve cord A list_7-8:specific vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | faint ubiquitous gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||