Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | oocyte somatic cells post follicle cells ant follicle cells enrichment_ubiquitous interfollicular stalk cells |
| stage8 |  s
 s
 s
 s
 s | ant follicle cells post follicle cells cytoplasmic foci somatic cells oocyte germline cells_ubiquitous |
| stage9 |  s
 s
 s
 s
 s | follicle cells_ubiquitous somatic cells germline cells_ubiquitous follicle cells |
| stage10 |  s
 s
 s
 s
 s
 s | follicle cells_ubiquitous somatic cells follicle cells germline cells_ubiquitous |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Stage 1-3 Embryonic localization patterns Localized Medium expression (21-40ms exp) Annotated by Eric Exclusionary patterns Yolk cortex exclusion Expressed Maternal |
| stage4-5 | 
 | vent blastoderm nuclei Perinuclear subset of nuclei Embryonic localization patterns Stage 4-5 Degraded completely stage 5 Localized Subcellular localization patterns Degraded partially stage 4 Degraded Intranuclear accumulation Perinuclear around blastoderm nuclei Perinuclear localization Exclusionary patterns Nuclei-associated localization Subset blastoderm nuclei Expressed Accumlation in subset nuclei post blastoderm nuclei Degradation maternal transcripts Zygotic Local terms for zyg transcripts Blastoderm nuclei Pole cell exclusion Accumlation entire nucleus Apical exclusion Maternal |
| stage6-7 | 
 | Accumlation entire nucleus Expressed Nuclei-associated localization Stage 6-7 Subset blastoderm nuclei Intranuclear accumulation Zygotic Blastoderm nuclei Local terms for zyg transcripts Localized Subcellular localization patterns post blastoderm nuclei Accumlation in subset nuclei vent blastoderm nuclei |
| stage8-9 | 
 | Subcellular localization patterns Localized Stage 8-9 Accumlation in subset nuclei Nuclei-associated localization Expressed Subset blastoderm nuclei Accumlation entire nucleus Local terms for zyg transcripts Blastoderm nuclei Segmented pattern Intranuclear accumulation Zygotic |
| stage10- | 
 | Sensory sys Expressed Brain CNS Blastoderm nuclei Zygotic Subcellular localization patterns Head Localized Stage 10- vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | gap list_4-6:specific faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | list_7-8:specific vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||