Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | post follicle cells oocyte somatic cells interfollicular stalk cells enrichment_ubiquitous ant follicle cells |
| stage8 |  s
 s
 s
 s
 s | oocyte cytoplasmic foci germline cells_ubiquitous post follicle cells ant follicle cells somatic cells |
| stage9 |  s
 s
 s
 s
 s | follicle cells germline cells_ubiquitous follicle cells_ubiquitous somatic cells |
| stage10 |  s
 s
 s
 s
 s
 s | follicle cells germline cells_ubiquitous follicle cells_ubiquitous somatic cells |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Localized Annotated by Eric Stage 1-3 Yolk cortex exclusion Exclusionary patterns Embryonic localization patterns Medium expression (21-40ms exp) Expressed Maternal |
| stage4-5 | 
 | Accumlation in subset nuclei Localized Zygotic Nuclei-associated localization Local terms for zyg transcripts Degradation maternal transcripts Subcellular localization patterns post blastoderm nuclei Pole cell exclusion Embryonic localization patterns Perinuclear subset of nuclei Perinuclear localization Apical exclusion Blastoderm nuclei Subset blastoderm nuclei Exclusionary patterns Degraded completely stage 5 Degraded Accumlation entire nucleus Degraded partially stage 4 Perinuclear around blastoderm nuclei Expressed Stage 4-5 vent blastoderm nuclei Intranuclear accumulation Maternal |
| stage6-7 | 
 | Stage 6-7 Local terms for zyg transcripts Accumlation entire nucleus Subcellular localization patterns post blastoderm nuclei Expressed vent blastoderm nuclei Intranuclear accumulation Localized Accumlation in subset nuclei Blastoderm nuclei Subset blastoderm nuclei Zygotic Nuclei-associated localization |
| stage8-9 | 
 | Zygotic Nuclei-associated localization Subset blastoderm nuclei Localized Accumlation in subset nuclei Blastoderm nuclei Stage 8-9 Intranuclear accumulation Accumlation entire nucleus Subcellular localization patterns Expressed Local terms for zyg transcripts Segmented pattern |
| stage10- | 
 | Brain Head Subcellular localization patterns Expressed CNS Blastoderm nuclei Localized Sensory sys Stage 10- Zygotic vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | faint ubiquitous list_4-6:specific gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap vent nerve cord A list_7-8:specific vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | faint ubiquitous gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||