Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | somatic cells interfollicular stalk cells post follicle cells ant follicle cells enrichment_ubiquitous oocyte |
| stage8 |  s
 s
 s
 s
 s | oocyte ant follicle cells post follicle cells germline cells_ubiquitous somatic cells cytoplasmic foci |
| stage9 |  s
 s
 s
 s
 s | follicle cells follicle cells_ubiquitous somatic cells germline cells_ubiquitous |
| stage10 |  s
 s
 s
 s
 s
 s | follicle cells follicle cells_ubiquitous germline cells_ubiquitous somatic cells |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Embryonic localization patterns Stage 1-3 Expressed Exclusionary patterns Annotated by Eric Localized Medium expression (21-40ms exp) Yolk cortex exclusion Maternal |
| stage4-5 | 
 | Blastoderm nuclei Perinuclear subset of nuclei Degraded partially stage 4 Perinuclear localization Apical exclusion Expressed post blastoderm nuclei Exclusionary patterns Perinuclear around blastoderm nuclei Subset blastoderm nuclei Intranuclear accumulation Nuclei-associated localization Accumlation in subset nuclei Pole cell exclusion Localized vent blastoderm nuclei Subcellular localization patterns Local terms for zyg transcripts Stage 4-5 Accumlation entire nucleus Degraded completely stage 5 Zygotic Degradation maternal transcripts Embryonic localization patterns Degraded Maternal |
| stage6-7 | 
 | Localized Accumlation in subset nuclei Stage 6-7 Accumlation entire nucleus Local terms for zyg transcripts Subcellular localization patterns vent blastoderm nuclei Zygotic Blastoderm nuclei Intranuclear accumulation Nuclei-associated localization Subset blastoderm nuclei post blastoderm nuclei Expressed |
| stage8-9 | 
 | Accumlation entire nucleus Stage 8-9 Segmented pattern Subcellular localization patterns Local terms for zyg transcripts Localized Accumlation in subset nuclei Nuclei-associated localization Intranuclear accumulation Subset blastoderm nuclei Expressed Blastoderm nuclei Zygotic |
| stage10- | 
 | Brain Expressed Head Blastoderm nuclei Zygotic Subcellular localization patterns Localized Sensory sys Stage 10- CNS vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | faint ubiquitous gap list_4-6:specific vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A list_7-8:specific gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | faint ubiquitous gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||