Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | oocyte post follicle cells interfollicular stalk cells somatic cells ant follicle cells enrichment_ubiquitous |
| stage8 |  s
 s
 s
 s
 s | cytoplasmic foci somatic cells ant follicle cells post follicle cells oocyte germline cells_ubiquitous |
| stage9 |  s
 s
 s
 s
 s | germline cells_ubiquitous follicle cells_ubiquitous follicle cells somatic cells |
| stage10 |  s
 s
 s
 s
 s
 s | follicle cells somatic cells germline cells_ubiquitous follicle cells_ubiquitous |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Embryonic localization patterns Expressed Localized Exclusionary patterns Annotated by Eric Yolk cortex exclusion Medium expression (21-40ms exp) Stage 1-3 Maternal |
| stage4-5 | 
 | Zygotic Accumlation entire nucleus Nuclei-associated localization Subcellular localization patterns Local terms for zyg transcripts Intranuclear accumulation Degradation maternal transcripts Degraded partially stage 4 vent blastoderm nuclei Perinuclear subset of nuclei Localized Subset blastoderm nuclei Blastoderm nuclei post blastoderm nuclei Degraded Degraded completely stage 5 Stage 4-5 Expressed Embryonic localization patterns Accumlation in subset nuclei Perinuclear around blastoderm nuclei Pole cell exclusion Exclusionary patterns Apical exclusion Perinuclear localization Maternal |
| stage6-7 | 
 | Localized Stage 6-7 Subset blastoderm nuclei Zygotic Accumlation entire nucleus Blastoderm nuclei post blastoderm nuclei Expressed Accumlation in subset nuclei Nuclei-associated localization Subcellular localization patterns Intranuclear accumulation Local terms for zyg transcripts vent blastoderm nuclei |
| stage8-9 | 
 | Intranuclear accumulation Local terms for zyg transcripts Segmented pattern Stage 8-9 Subcellular localization patterns Nuclei-associated localization Accumlation in subset nuclei Expressed Blastoderm nuclei Accumlation entire nucleus Zygotic Localized Subset blastoderm nuclei |
| stage10- | 
 | Head Subcellular localization patterns Blastoderm nuclei Stage 10- Sensory sys Expressed CNS Zygotic Brain Localized vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | faint ubiquitous gap list_4-6:specific vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | list_7-8:specific vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | faint ubiquitous gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||