Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | ant follicle cells oocyte interfollicular stalk cells somatic cells enrichment_ubiquitous post follicle cells |
| stage8 |  s
 s
 s
 s
 s | post follicle cells cytoplasmic foci germline cells_ubiquitous oocyte ant follicle cells somatic cells |
| stage9 |  s
 s
 s
 s
 s | follicle cells follicle cells_ubiquitous somatic cells germline cells_ubiquitous |
| stage10 |  s
 s
 s
 s
 s
 s | follicle cells follicle cells_ubiquitous germline cells_ubiquitous somatic cells |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Yolk cortex exclusion Medium expression (21-40ms exp) Embryonic localization patterns Exclusionary patterns Stage 1-3 Localized Expressed Annotated by Eric Maternal |
| stage4-5 | 
 | Pole cell exclusion Subcellular localization patterns vent blastoderm nuclei Embryonic localization patterns Exclusionary patterns Perinuclear around blastoderm nuclei Intranuclear accumulation Apical exclusion Nuclei-associated localization Zygotic Degraded partially stage 4 Subset blastoderm nuclei Stage 4-5 Local terms for zyg transcripts Accumlation entire nucleus Perinuclear subset of nuclei post blastoderm nuclei Expressed Degraded Localized Accumlation in subset nuclei Degraded completely stage 5 Blastoderm nuclei Degradation maternal transcripts Perinuclear localization Maternal |
| stage6-7 | 
 | Intranuclear accumulation post blastoderm nuclei Accumlation entire nucleus Stage 6-7 Subset blastoderm nuclei Local terms for zyg transcripts Subcellular localization patterns vent blastoderm nuclei Accumlation in subset nuclei Localized Zygotic Blastoderm nuclei Nuclei-associated localization Expressed |
| stage8-9 | 
 | Subset blastoderm nuclei Local terms for zyg transcripts Subcellular localization patterns Stage 8-9 Segmented pattern Intranuclear accumulation Accumlation entire nucleus Nuclei-associated localization Expressed Accumlation in subset nuclei Localized Zygotic Blastoderm nuclei |
| stage10- | 
 | Blastoderm nuclei Localized Brain Zygotic Expressed Head CNS Sensory sys Stage 10- Subcellular localization patterns vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | faint ubiquitous gap list_4-6:specific vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | list_7-8:specific vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | faint ubiquitous gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||