Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | enrichment_ubiquitous somatic cells oocyte post follicle cells interfollicular stalk cells ant follicle cells |
| stage8 |  s
 s
 s
 s
 s | post follicle cells oocyte somatic cells cytoplasmic foci ant follicle cells germline cells_ubiquitous |
| stage9 |  s
 s
 s
 s
 s | follicle cells_ubiquitous somatic cells follicle cells germline cells_ubiquitous |
| stage10 |  s
 s
 s
 s
 s
 s | somatic cells follicle cells_ubiquitous follicle cells germline cells_ubiquitous |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Exclusionary patterns Stage 1-3 Yolk cortex exclusion Medium expression (21-40ms exp) Annotated by Eric Embryonic localization patterns Localized Expressed Maternal |
| stage4-5 | 
 | Degraded partially stage 4 Degraded completely stage 5 Subcellular localization patterns Perinuclear localization Expressed Accumlation in subset nuclei Embryonic localization patterns Subset blastoderm nuclei Degradation maternal transcripts Accumlation entire nucleus Stage 4-5 post blastoderm nuclei Blastoderm nuclei Exclusionary patterns Perinuclear subset of nuclei Degraded vent blastoderm nuclei Localized Perinuclear around blastoderm nuclei Intranuclear accumulation Zygotic Nuclei-associated localization Local terms for zyg transcripts Apical exclusion Pole cell exclusion Maternal |
| stage6-7 | 
 | Blastoderm nuclei Local terms for zyg transcripts Nuclei-associated localization post blastoderm nuclei Accumlation entire nucleus Zygotic Subset blastoderm nuclei Stage 6-7 Intranuclear accumulation Expressed Accumlation in subset nuclei vent blastoderm nuclei Subcellular localization patterns Localized |
| stage8-9 | 
 | Zygotic Accumlation entire nucleus Intranuclear accumulation Subset blastoderm nuclei Accumlation in subset nuclei Expressed Localized Subcellular localization patterns Blastoderm nuclei Local terms for zyg transcripts Segmented pattern Stage 8-9 Nuclei-associated localization |
| stage10- | 
 | Expressed Subcellular localization patterns Localized Zygotic Brain Sensory sys CNS Head Stage 10- Blastoderm nuclei vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | list_4-6:specific faint ubiquitous gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | list_7-8:specific gap vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||