Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | ant follicle cells post follicle cells interfollicular stalk cells somatic cells oocyte enrichment_ubiquitous |
| stage8 |  s
 s
 s
 s
 s | post follicle cells ant follicle cells somatic cells oocyte cytoplasmic foci germline cells_ubiquitous |
| stage9 |  s
 s
 s
 s
 s | germline cells_ubiquitous follicle cells somatic cells follicle cells_ubiquitous |
| stage10 |  s
 s
 s
 s
 s
 s | follicle cells_ubiquitous somatic cells follicle cells germline cells_ubiquitous |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Medium expression (21-40ms exp) Embryonic localization patterns Expressed Stage 1-3 Yolk cortex exclusion Exclusionary patterns Annotated by Eric Localized Maternal |
| stage4-5 | 
 | Exclusionary patterns Pole cell exclusion Perinuclear localization Stage 4-5 vent blastoderm nuclei Localized Zygotic Degraded partially stage 4 Apical exclusion Perinuclear around blastoderm nuclei Embryonic localization patterns Perinuclear subset of nuclei Blastoderm nuclei Nuclei-associated localization Degraded Subset blastoderm nuclei Intranuclear accumulation Local terms for zyg transcripts Accumlation in subset nuclei Accumlation entire nucleus post blastoderm nuclei Subcellular localization patterns Degraded completely stage 5 Expressed Degradation maternal transcripts Maternal |
| stage6-7 | 
 | Localized vent blastoderm nuclei Nuclei-associated localization Blastoderm nuclei Zygotic Subset blastoderm nuclei Intranuclear accumulation Accumlation in subset nuclei Local terms for zyg transcripts Accumlation entire nucleus Stage 6-7 Subcellular localization patterns post blastoderm nuclei Expressed |
| stage8-9 | 
 | Localized Blastoderm nuclei Nuclei-associated localization Segmented pattern Subset blastoderm nuclei Zygotic Stage 8-9 Intranuclear accumulation Accumlation entire nucleus Local terms for zyg transcripts Accumlation in subset nuclei Subcellular localization patterns Expressed |
| stage10- | 
 | Blastoderm nuclei CNS Localized Head Brain Expressed Stage 10- Zygotic Sensory sys Subcellular localization patterns vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | list_4-6:specific faint ubiquitous gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap list_7-8:specific vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | faint ubiquitous gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||