Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | ant follicle cells interfollicular stalk cells oocyte somatic cells post follicle cells enrichment_ubiquitous |
| stage8 |  s
 s
 s
 s
 s | ant follicle cells oocyte germline cells_ubiquitous somatic cells post follicle cells cytoplasmic foci |
| stage9 |  s
 s
 s
 s
 s | follicle cells_ubiquitous somatic cells germline cells_ubiquitous follicle cells |
| stage10 |  s
 s
 s
 s
 s
 s | follicle cells follicle cells_ubiquitous somatic cells germline cells_ubiquitous |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Annotated by Eric Medium expression (21-40ms exp) Expressed Localized Yolk cortex exclusion Stage 1-3 Embryonic localization patterns Exclusionary patterns Maternal |
| stage4-5 | 
 | Intranuclear accumulation Subset blastoderm nuclei Stage 4-5 Degraded completely stage 5 Embryonic localization patterns Nuclei-associated localization Apical exclusion Accumlation in subset nuclei Perinuclear around blastoderm nuclei post blastoderm nuclei Perinuclear localization vent blastoderm nuclei Perinuclear subset of nuclei Exclusionary patterns Accumlation entire nucleus Subcellular localization patterns Degraded partially stage 4 Degradation maternal transcripts Degraded Pole cell exclusion Localized Zygotic Expressed Local terms for zyg transcripts Blastoderm nuclei Maternal |
| stage6-7 | 
 | Blastoderm nuclei vent blastoderm nuclei Local terms for zyg transcripts post blastoderm nuclei Expressed Localized Zygotic Accumlation in subset nuclei Stage 6-7 Nuclei-associated localization Subset blastoderm nuclei Accumlation entire nucleus Subcellular localization patterns Intranuclear accumulation |
| stage8-9 | 
 | Intranuclear accumulation Subcellular localization patterns Accumlation entire nucleus Subset blastoderm nuclei Nuclei-associated localization Zygotic Localized Accumlation in subset nuclei Stage 8-9 Blastoderm nuclei Local terms for zyg transcripts Segmented pattern Expressed |
| stage10- | 
 | Subcellular localization patterns CNS Head Brain Zygotic Localized Stage 10- Blastoderm nuclei Sensory sys Expressed vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | gap list_4-6:specific faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap list_7-8:specific vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | faint ubiquitous gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||