Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | enrichment_ubiquitous oocyte somatic cells ant follicle cells post follicle cells interfollicular stalk cells |
| stage8 |  s
 s
 s
 s
 s | somatic cells oocyte ant follicle cells cytoplasmic foci germline cells_ubiquitous post follicle cells |
| stage9 |  s
 s
 s
 s
 s | somatic cells follicle cells_ubiquitous follicle cells germline cells_ubiquitous |
| stage10 |  s
 s
 s
 s
 s
 s | germline cells_ubiquitous follicle cells somatic cells follicle cells_ubiquitous |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Embryonic localization patterns Localized Yolk cortex exclusion Exclusionary patterns Expressed Annotated by Eric Medium expression (21-40ms exp) Stage 1-3 Maternal |
| stage4-5 | 
 | Accumlation in subset nuclei Degradation maternal transcripts Stage 4-5 Pole cell exclusion Nuclei-associated localization Apical exclusion Intranuclear accumulation Localized Blastoderm nuclei Degraded Perinuclear around blastoderm nuclei Perinuclear subset of nuclei post blastoderm nuclei Subcellular localization patterns Expressed Subset blastoderm nuclei Exclusionary patterns Degraded completely stage 5 Accumlation entire nucleus Zygotic Perinuclear localization Degraded partially stage 4 vent blastoderm nuclei Local terms for zyg transcripts Embryonic localization patterns Maternal |
| stage6-7 | 
 | Zygotic Accumlation entire nucleus Nuclei-associated localization Localized Local terms for zyg transcripts vent blastoderm nuclei Intranuclear accumulation Blastoderm nuclei Accumlation in subset nuclei Subcellular localization patterns Expressed post blastoderm nuclei Stage 6-7 Subset blastoderm nuclei |
| stage8-9 | 
 | Local terms for zyg transcripts Localized Segmented pattern Intranuclear accumulation Accumlation entire nucleus Zygotic Nuclei-associated localization Stage 8-9 Blastoderm nuclei Subcellular localization patterns Expressed Accumlation in subset nuclei Subset blastoderm nuclei |
| stage10- | 
 | Zygotic CNS Brain Localized Blastoderm nuclei Sensory sys Head Stage 10- Subcellular localization patterns Expressed vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | gap list_4-6:specific faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap vent nerve cord A list_7-8:specific vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||