Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | ant follicle cells post follicle cells somatic cells oocyte interfollicular stalk cells enrichment_ubiquitous |
| stage8 |  s
 s
 s
 s
 s | oocyte somatic cells germline cells_ubiquitous cytoplasmic foci ant follicle cells post follicle cells |
| stage9 |  s
 s
 s
 s
 s | germline cells_ubiquitous somatic cells follicle cells follicle cells_ubiquitous |
| stage10 |  s
 s
 s
 s
 s
 s | germline cells_ubiquitous somatic cells follicle cells follicle cells_ubiquitous |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Exclusionary patterns Medium expression (21-40ms exp) Yolk cortex exclusion Annotated by Eric Stage 1-3 Expressed Embryonic localization patterns Localized Maternal |
| stage4-5 | 
 | Perinuclear localization Zygotic Embryonic localization patterns Expressed post blastoderm nuclei Pole cell exclusion vent blastoderm nuclei Apical exclusion Subcellular localization patterns Perinuclear subset of nuclei Degraded Blastoderm nuclei Accumlation in subset nuclei Local terms for zyg transcripts Degradation maternal transcripts Degraded partially stage 4 Nuclei-associated localization Stage 4-5 Localized Perinuclear around blastoderm nuclei Accumlation entire nucleus Intranuclear accumulation Degraded completely stage 5 Subset blastoderm nuclei Exclusionary patterns Maternal |
| stage6-7 | 
 | Expressed Accumlation entire nucleus Nuclei-associated localization Zygotic Localized Subcellular localization patterns post blastoderm nuclei Intranuclear accumulation vent blastoderm nuclei Local terms for zyg transcripts Blastoderm nuclei Accumlation in subset nuclei Stage 6-7 Subset blastoderm nuclei |
| stage8-9 | 
 | Subcellular localization patterns Intranuclear accumulation Local terms for zyg transcripts Accumlation in subset nuclei Subset blastoderm nuclei Blastoderm nuclei Accumlation entire nucleus Expressed Segmented pattern Stage 8-9 Localized Zygotic Nuclei-associated localization |
| stage10- | 
 | Stage 10- Blastoderm nuclei Head Subcellular localization patterns Localized Zygotic Expressed Brain CNS Sensory sys vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | list_4-6:specific faint ubiquitous gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap list_7-8:specific vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | faint ubiquitous gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||