Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | ant follicle cells interfollicular stalk cells oocyte post follicle cells somatic cells enrichment_ubiquitous |
| stage8 |  s
 s
 s
 s
 s | cytoplasmic foci somatic cells post follicle cells germline cells_ubiquitous ant follicle cells oocyte |
| stage9 |  s
 s
 s
 s
 s | somatic cells follicle cells_ubiquitous germline cells_ubiquitous follicle cells |
| stage10 |  s
 s
 s
 s
 s
 s | follicle cells_ubiquitous somatic cells germline cells_ubiquitous follicle cells |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Exclusionary patterns Annotated by Eric Yolk cortex exclusion Medium expression (21-40ms exp) Localized Expressed Stage 1-3 Embryonic localization patterns Maternal |
| stage4-5 | 
 | Perinuclear localization Local terms for zyg transcripts Localized Expressed Apical exclusion post blastoderm nuclei Accumlation entire nucleus Degraded vent blastoderm nuclei Degraded completely stage 5 Degradation maternal transcripts Exclusionary patterns Pole cell exclusion Subset blastoderm nuclei Intranuclear accumulation Stage 4-5 Subcellular localization patterns Perinuclear subset of nuclei Embryonic localization patterns Blastoderm nuclei Nuclei-associated localization Perinuclear around blastoderm nuclei Zygotic Accumlation in subset nuclei Degraded partially stage 4 Maternal |
| stage6-7 | 
 | Nuclei-associated localization Blastoderm nuclei Subcellular localization patterns Accumlation entire nucleus post blastoderm nuclei Expressed Localized Local terms for zyg transcripts Intranuclear accumulation Stage 6-7 Accumlation in subset nuclei Subset blastoderm nuclei Zygotic vent blastoderm nuclei |
| stage8-9 | 
 | Accumlation in subset nuclei Subset blastoderm nuclei Zygotic Nuclei-associated localization Segmented pattern Blastoderm nuclei Subcellular localization patterns Accumlation entire nucleus Expressed Intranuclear accumulation Local terms for zyg transcripts Localized Stage 8-9 |
| stage10- | 
 | CNS Blastoderm nuclei Subcellular localization patterns Stage 10- Expressed Localized Sensory sys Head Zygotic Brain vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | gap faint ubiquitous list_4-6:specific vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | list_7-8:specific vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||