Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | post follicle cells interfollicular stalk cells enrichment_ubiquitous oocyte somatic cells ant follicle cells |
| stage8 |  s
 s
 s
 s
 s | germline cells_ubiquitous post follicle cells oocyte somatic cells cytoplasmic foci ant follicle cells |
| stage9 |  s
 s
 s
 s
 s | germline cells_ubiquitous follicle cells_ubiquitous somatic cells follicle cells |
| stage10 |  s
 s
 s
 s
 s
 s | follicle cells_ubiquitous germline cells_ubiquitous follicle cells somatic cells |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Exclusionary patterns Localized Stage 1-3 Yolk cortex exclusion Annotated by Eric Expressed Embryonic localization patterns Medium expression (21-40ms exp) Maternal |
| stage4-5 | 
 | Subset blastoderm nuclei post blastoderm nuclei Degraded Zygotic Expressed vent blastoderm nuclei Accumlation entire nucleus Apical exclusion Accumlation in subset nuclei Perinuclear around blastoderm nuclei Perinuclear subset of nuclei Pole cell exclusion Stage 4-5 Degradation maternal transcripts Intranuclear accumulation Perinuclear localization Embryonic localization patterns Nuclei-associated localization Blastoderm nuclei Degraded partially stage 4 Degraded completely stage 5 Local terms for zyg transcripts Exclusionary patterns Subcellular localization patterns Localized Maternal |
| stage6-7 | 
 | post blastoderm nuclei Nuclei-associated localization Subset blastoderm nuclei Accumlation entire nucleus Blastoderm nuclei vent blastoderm nuclei Expressed Zygotic Accumlation in subset nuclei Stage 6-7 Subcellular localization patterns Localized Local terms for zyg transcripts Intranuclear accumulation |
| stage8-9 | 
 | Stage 8-9 Accumlation in subset nuclei Intranuclear accumulation Local terms for zyg transcripts Segmented pattern Localized Subcellular localization patterns Subset blastoderm nuclei Nuclei-associated localization Zygotic Accumlation entire nucleus Blastoderm nuclei Expressed |
| stage10- | 
 | Zygotic Blastoderm nuclei Expressed Sensory sys CNS Stage 10- Head Brain Localized Subcellular localization patterns vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | faint ubiquitous list_4-6:specific gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap vent nerve cord A list_7-8:specific vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||