Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | post follicle cells somatic cells interfollicular stalk cells enrichment_ubiquitous ant follicle cells oocyte |
| stage8 |  s
 s
 s
 s
 s | ant follicle cells germline cells_ubiquitous cytoplasmic foci oocyte post follicle cells somatic cells |
| stage9 |  s
 s
 s
 s
 s | somatic cells follicle cells germline cells_ubiquitous follicle cells_ubiquitous |
| stage10 |  s
 s
 s
 s
 s
 s | follicle cells_ubiquitous follicle cells germline cells_ubiquitous somatic cells |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Localized Embryonic localization patterns Expressed Stage 1-3 Yolk cortex exclusion Annotated by Eric Medium expression (21-40ms exp) Exclusionary patterns Maternal |
| stage4-5 | 
 | Accumlation entire nucleus Embryonic localization patterns Localized Apical exclusion Nuclei-associated localization Expressed Degraded Degradation maternal transcripts vent blastoderm nuclei Zygotic Subcellular localization patterns Pole cell exclusion Accumlation in subset nuclei Perinuclear around blastoderm nuclei post blastoderm nuclei Perinuclear localization Subset blastoderm nuclei Degraded partially stage 4 Intranuclear accumulation Degraded completely stage 5 Exclusionary patterns Perinuclear subset of nuclei Local terms for zyg transcripts Blastoderm nuclei Stage 4-5 Maternal |
| stage6-7 | 
 | vent blastoderm nuclei Stage 6-7 Zygotic Local terms for zyg transcripts Subcellular localization patterns Blastoderm nuclei Nuclei-associated localization Intranuclear accumulation Expressed Subset blastoderm nuclei Accumlation entire nucleus Accumlation in subset nuclei Localized post blastoderm nuclei |
| stage8-9 | 
 | Nuclei-associated localization Intranuclear accumulation Expressed Zygotic Local terms for zyg transcripts Subcellular localization patterns Blastoderm nuclei Stage 8-9 Localized Accumlation entire nucleus Accumlation in subset nuclei Subset blastoderm nuclei Segmented pattern |
| stage10- | 
 | Expressed Zygotic Subcellular localization patterns Blastoderm nuclei Localized Head CNS Sensory sys Stage 10- Brain vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | gap faint ubiquitous list_4-6:specific vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap list_7-8:specific vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||