Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | enrichment_ubiquitous post follicle cells oocyte interfollicular stalk cells ant follicle cells somatic cells |
| stage8 |  s
 s
 s
 s
 s | cytoplasmic foci post follicle cells oocyte ant follicle cells germline cells_ubiquitous somatic cells |
| stage9 |  s
 s
 s
 s
 s | follicle cells_ubiquitous germline cells_ubiquitous somatic cells follicle cells |
| stage10 |  s
 s
 s
 s
 s
 s | follicle cells_ubiquitous somatic cells germline cells_ubiquitous follicle cells |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Medium expression (21-40ms exp) Exclusionary patterns Localized Embryonic localization patterns Yolk cortex exclusion Expressed Annotated by Eric Stage 1-3 Maternal |
| stage4-5 | 
 | Stage 4-5 Blastoderm nuclei post blastoderm nuclei Expressed Degraded partially stage 4 Localized Pole cell exclusion Degradation maternal transcripts Exclusionary patterns vent blastoderm nuclei Zygotic Degraded Perinuclear subset of nuclei Perinuclear localization Subset blastoderm nuclei Apical exclusion Embryonic localization patterns Subcellular localization patterns Degraded completely stage 5 Perinuclear around blastoderm nuclei Accumlation in subset nuclei Local terms for zyg transcripts Accumlation entire nucleus Nuclei-associated localization Intranuclear accumulation Maternal |
| stage6-7 | 
 | Accumlation entire nucleus Local terms for zyg transcripts Zygotic Nuclei-associated localization Intranuclear accumulation Localized vent blastoderm nuclei Accumlation in subset nuclei Stage 6-7 Blastoderm nuclei Subset blastoderm nuclei Subcellular localization patterns Expressed post blastoderm nuclei |
| stage8-9 | 
 | Expressed Subcellular localization patterns Stage 8-9 Segmented pattern Subset blastoderm nuclei Blastoderm nuclei Localized Accumlation in subset nuclei Accumlation entire nucleus Local terms for zyg transcripts Zygotic Nuclei-associated localization Intranuclear accumulation |
| stage10- | 
 | Sensory sys Brain Stage 10- CNS Zygotic Localized Head Subcellular localization patterns Expressed Blastoderm nuclei vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | gap list_4-6:specific faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | list_7-8:specific vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||