Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | interfollicular stalk cells post follicle cells oocyte ant follicle cells enrichment_ubiquitous somatic cells |
| stage8 |  s
 s
 s
 s
 s | somatic cells cytoplasmic foci post follicle cells ant follicle cells oocyte germline cells_ubiquitous |
| stage9 |  s
 s
 s
 s
 s | germline cells_ubiquitous somatic cells follicle cells_ubiquitous follicle cells |
| stage10 |  s
 s
 s
 s
 s
 s | somatic cells germline cells_ubiquitous follicle cells follicle cells_ubiquitous |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Stage 1-3 Expressed Exclusionary patterns Medium expression (21-40ms exp) Annotated by Eric Yolk cortex exclusion Localized Embryonic localization patterns Maternal |
| stage4-5 | 
 | Subcellular localization patterns Pole cell exclusion Stage 4-5 Apical exclusion Blastoderm nuclei Perinuclear localization Accumlation in subset nuclei Degradation maternal transcripts Embryonic localization patterns Localized Accumlation entire nucleus Intranuclear accumulation Local terms for zyg transcripts Nuclei-associated localization Exclusionary patterns Expressed Zygotic vent blastoderm nuclei Degraded partially stage 4 post blastoderm nuclei Subset blastoderm nuclei Degraded Perinuclear around blastoderm nuclei Degraded completely stage 5 Perinuclear subset of nuclei Maternal |
| stage6-7 | 
 | Intranuclear accumulation Subcellular localization patterns Accumlation entire nucleus Stage 6-7 Zygotic vent blastoderm nuclei Expressed Local terms for zyg transcripts Nuclei-associated localization Accumlation in subset nuclei Subset blastoderm nuclei Blastoderm nuclei post blastoderm nuclei Localized |
| stage8-9 | 
 | Local terms for zyg transcripts Nuclei-associated localization Expressed Zygotic Segmented pattern Accumlation entire nucleus Subcellular localization patterns Intranuclear accumulation Localized Stage 8-9 Accumlation in subset nuclei Subset blastoderm nuclei Blastoderm nuclei |
| stage10- | 
 | Brain Blastoderm nuclei Localized Sensory sys Head Subcellular localization patterns Stage 10- CNS Expressed Zygotic vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | gap faint ubiquitous list_4-6:specific vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap list_7-8:specific vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | faint ubiquitous gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||