Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | post follicle cells somatic cells oocyte interfollicular stalk cells ant follicle cells enrichment_ubiquitous |
| stage8 |  s
 s
 s
 s
 s | ant follicle cells oocyte post follicle cells somatic cells germline cells_ubiquitous cytoplasmic foci |
| stage9 |  s
 s
 s
 s
 s | follicle cells_ubiquitous germline cells_ubiquitous follicle cells somatic cells |
| stage10 |  s
 s
 s
 s
 s
 s | follicle cells somatic cells follicle cells_ubiquitous germline cells_ubiquitous |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Embryonic localization patterns Expressed Yolk cortex exclusion Exclusionary patterns Annotated by Eric Medium expression (21-40ms exp) Localized Stage 1-3 Maternal |
| stage4-5 | 
 | Exclusionary patterns Degraded partially stage 4 Apical exclusion Stage 4-5 Perinuclear around blastoderm nuclei Localized Embryonic localization patterns Degraded Accumlation entire nucleus Zygotic Local terms for zyg transcripts Blastoderm nuclei Subcellular localization patterns Nuclei-associated localization Subset blastoderm nuclei Pole cell exclusion Degraded completely stage 5 Perinuclear localization post blastoderm nuclei Expressed Degradation maternal transcripts vent blastoderm nuclei Perinuclear subset of nuclei Accumlation in subset nuclei Intranuclear accumulation Maternal |
| stage6-7 | 
 | Subset blastoderm nuclei Stage 6-7 post blastoderm nuclei Localized Zygotic Accumlation entire nucleus Expressed Local terms for zyg transcripts Blastoderm nuclei vent blastoderm nuclei Subcellular localization patterns Nuclei-associated localization Intranuclear accumulation Accumlation in subset nuclei |
| stage8-9 | 
 | Subset blastoderm nuclei Segmented pattern Stage 8-9 Localized Zygotic Accumlation entire nucleus Expressed Blastoderm nuclei Local terms for zyg transcripts Subcellular localization patterns Nuclei-associated localization Intranuclear accumulation Accumlation in subset nuclei |
| stage10- | 
 | Sensory sys Localized Head Stage 10- Blastoderm nuclei CNS Zygotic Expressed Brain Subcellular localization patterns vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | gap list_4-6:specific faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | list_7-8:specific vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||