Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | enrichment_ubiquitous oocyte ant follicle cells post follicle cells interfollicular stalk cells somatic cells |
| stage8 |  s
 s
 s
 s
 s | cytoplasmic foci post follicle cells somatic cells germline cells_ubiquitous oocyte ant follicle cells |
| stage9 |  s
 s
 s
 s
 s | somatic cells follicle cells germline cells_ubiquitous follicle cells_ubiquitous |
| stage10 |  s
 s
 s
 s
 s
 s | germline cells_ubiquitous follicle cells_ubiquitous follicle cells somatic cells |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Localized Expressed Medium expression (21-40ms exp) Embryonic localization patterns Stage 1-3 Yolk cortex exclusion Exclusionary patterns Annotated by Eric Maternal |
| stage4-5 | 
 | Stage 4-5 Perinuclear around blastoderm nuclei Apical exclusion Intranuclear accumulation Accumlation entire nucleus vent blastoderm nuclei Blastoderm nuclei Zygotic Degraded partially stage 4 Perinuclear subset of nuclei Subcellular localization patterns Nuclei-associated localization Degraded Perinuclear localization Expressed Degradation maternal transcripts Localized post blastoderm nuclei Local terms for zyg transcripts Exclusionary patterns Degraded completely stage 5 Pole cell exclusion Embryonic localization patterns Accumlation in subset nuclei Subset blastoderm nuclei Maternal |
| stage6-7 | 
 | Subcellular localization patterns Accumlation in subset nuclei Nuclei-associated localization Subset blastoderm nuclei Accumlation entire nucleus vent blastoderm nuclei Stage 6-7 Blastoderm nuclei Zygotic post blastoderm nuclei Localized Intranuclear accumulation Local terms for zyg transcripts Expressed |
| stage8-9 | 
 | Subcellular localization patterns Subset blastoderm nuclei Accumlation in subset nuclei Nuclei-associated localization Accumlation entire nucleus Zygotic Blastoderm nuclei Local terms for zyg transcripts Localized Intranuclear accumulation Segmented pattern Stage 8-9 Expressed |
| stage10- | 
 | Stage 10- Subcellular localization patterns Head Zygotic Blastoderm nuclei Brain Localized Sensory sys CNS Expressed vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | list_4-6:specific gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | list_7-8:specific vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||