Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | oocyte somatic cells post follicle cells ant follicle cells interfollicular stalk cells enrichment_ubiquitous |
| stage8 |  s
 s
 s
 s
 s | post follicle cells ant follicle cells germline cells_ubiquitous somatic cells oocyte cytoplasmic foci |
| stage9 |  s
 s
 s
 s
 s | germline cells_ubiquitous somatic cells follicle cells follicle cells_ubiquitous |
| stage10 |  s
 s
 s
 s
 s
 s | follicle cells germline cells_ubiquitous somatic cells follicle cells_ubiquitous |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Stage 1-3 Annotated by Eric Medium expression (21-40ms exp) Yolk cortex exclusion Exclusionary patterns Localized Expressed Embryonic localization patterns Maternal |
| stage4-5 | 
 | Localized Degraded Exclusionary patterns Zygotic Perinuclear subset of nuclei post blastoderm nuclei Nuclei-associated localization Perinuclear around blastoderm nuclei Degraded completely stage 5 Accumlation in subset nuclei Subset blastoderm nuclei Pole cell exclusion Subcellular localization patterns Intranuclear accumulation Stage 4-5 Expressed Blastoderm nuclei vent blastoderm nuclei Embryonic localization patterns Degradation maternal transcripts Accumlation entire nucleus Local terms for zyg transcripts Degraded partially stage 4 Apical exclusion Perinuclear localization Maternal |
| stage6-7 | 
 | Nuclei-associated localization Accumlation entire nucleus Accumlation in subset nuclei Subset blastoderm nuclei Local terms for zyg transcripts Intranuclear accumulation Subcellular localization patterns Localized Expressed Blastoderm nuclei vent blastoderm nuclei Zygotic post blastoderm nuclei Stage 6-7 |
| stage8-9 | 
 | Accumlation in subset nuclei Accumlation entire nucleus Nuclei-associated localization Subcellular localization patterns Intranuclear accumulation Subset blastoderm nuclei Local terms for zyg transcripts Segmented pattern Expressed Localized Blastoderm nuclei Stage 8-9 Zygotic |
| stage10- | 
 | Zygotic CNS Stage 10- Head Blastoderm nuclei Expressed Localized Subcellular localization patterns Brain Sensory sys vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | faint ubiquitous gap list_4-6:specific vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A list_7-8:specific gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | faint ubiquitous gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||