Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | enrichment_ubiquitous interfollicular stalk cells post follicle cells ant follicle cells somatic cells oocyte |
| stage8 |  s
 s
 s
 s
 s | germline cells_ubiquitous somatic cells oocyte cytoplasmic foci post follicle cells ant follicle cells |
| stage9 |  s
 s
 s
 s
 s | germline cells_ubiquitous follicle cells follicle cells_ubiquitous somatic cells |
| stage10 |  s
 s
 s
 s
 s
 s | somatic cells follicle cells follicle cells_ubiquitous germline cells_ubiquitous |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Localized Medium expression (21-40ms exp) Annotated by Eric Embryonic localization patterns Expressed Exclusionary patterns Stage 1-3 Yolk cortex exclusion Maternal |
| stage4-5 | 
 | Subset blastoderm nuclei Degraded Intranuclear accumulation post blastoderm nuclei Zygotic Pole cell exclusion Localized Degradation maternal transcripts Blastoderm nuclei Degraded partially stage 4 Degraded completely stage 5 Exclusionary patterns vent blastoderm nuclei Stage 4-5 Subcellular localization patterns Local terms for zyg transcripts Perinuclear subset of nuclei Perinuclear around blastoderm nuclei Apical exclusion Expressed Embryonic localization patterns Accumlation entire nucleus Nuclei-associated localization Perinuclear localization Accumlation in subset nuclei Maternal |
| stage6-7 | 
 | Nuclei-associated localization Stage 6-7 Accumlation entire nucleus Blastoderm nuclei Accumlation in subset nuclei Zygotic Intranuclear accumulation post blastoderm nuclei Subcellular localization patterns Subset blastoderm nuclei vent blastoderm nuclei Expressed Localized Local terms for zyg transcripts |
| stage8-9 | 
 | Localized Local terms for zyg transcripts Segmented pattern Expressed Subset blastoderm nuclei Zygotic Intranuclear accumulation Subcellular localization patterns Stage 8-9 Accumlation in subset nuclei Blastoderm nuclei Nuclei-associated localization Accumlation entire nucleus |
| stage10- | 
 | CNS Brain Sensory sys Blastoderm nuclei Localized Expressed Stage 10- Head Zygotic Subcellular localization patterns vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | gap faint ubiquitous list_4-6:specific vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A list_7-8:specific gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | faint ubiquitous gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||