Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | somatic cells interfollicular stalk cells oocyte ant follicle cells enrichment_ubiquitous post follicle cells |
| stage8 |  s
 s
 s
 s
 s | cytoplasmic foci germline cells_ubiquitous post follicle cells oocyte somatic cells ant follicle cells |
| stage9 |  s
 s
 s
 s
 s | follicle cells germline cells_ubiquitous somatic cells follicle cells_ubiquitous |
| stage10 |  s
 s
 s
 s
 s
 s | somatic cells follicle cells_ubiquitous follicle cells germline cells_ubiquitous |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Expressed Embryonic localization patterns Exclusionary patterns Medium expression (21-40ms exp) Yolk cortex exclusion Annotated by Eric Stage 1-3 Localized Maternal |
| stage4-5 | 
 | Accumlation in subset nuclei Apical exclusion Degraded Perinuclear subset of nuclei Exclusionary patterns Subcellular localization patterns Perinuclear around blastoderm nuclei Blastoderm nuclei Local terms for zyg transcripts vent blastoderm nuclei Zygotic Perinuclear localization Degradation maternal transcripts Degraded partially stage 4 Localized Degraded completely stage 5 Subset blastoderm nuclei Accumlation entire nucleus Nuclei-associated localization Embryonic localization patterns Pole cell exclusion Expressed Stage 4-5 post blastoderm nuclei Intranuclear accumulation Maternal |
| stage6-7 | 
 | Localized Accumlation in subset nuclei Stage 6-7 Subset blastoderm nuclei Accumlation entire nucleus Nuclei-associated localization Subcellular localization patterns Expressed Local terms for zyg transcripts vent blastoderm nuclei Blastoderm nuclei post blastoderm nuclei Zygotic Intranuclear accumulation |
| stage8-9 | 
 | Accumlation entire nucleus Subset blastoderm nuclei Accumlation in subset nuclei Localized Subcellular localization patterns Nuclei-associated localization Blastoderm nuclei Local terms for zyg transcripts Stage 8-9 Expressed Intranuclear accumulation Zygotic Segmented pattern |
| stage10- | 
 | Expressed Sensory sys Blastoderm nuclei Stage 10- Zygotic CNS Brain Localized Head Subcellular localization patterns vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | gap list_4-6:specific faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap vent nerve cord A list_7-8:specific vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | faint ubiquitous gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||