Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | ant follicle cells oocyte post follicle cells somatic cells interfollicular stalk cells enrichment_ubiquitous |
| stage8 |  s
 s
 s
 s
 s | oocyte ant follicle cells post follicle cells cytoplasmic foci somatic cells germline cells_ubiquitous |
| stage9 |  s
 s
 s
 s
 s | follicle cells germline cells_ubiquitous follicle cells_ubiquitous somatic cells |
| stage10 |  s
 s
 s
 s
 s
 s | follicle cells somatic cells follicle cells_ubiquitous germline cells_ubiquitous |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Localized Yolk cortex exclusion Exclusionary patterns Expressed Embryonic localization patterns Stage 1-3 Medium expression (21-40ms exp) Annotated by Eric Maternal |
| stage4-5 | 
 | Nuclei-associated localization vent blastoderm nuclei Subset blastoderm nuclei Localized Perinuclear localization Stage 4-5 Degraded completely stage 5 Degradation maternal transcripts Zygotic Apical exclusion Embryonic localization patterns Accumlation in subset nuclei Intranuclear accumulation Subcellular localization patterns Exclusionary patterns post blastoderm nuclei Accumlation entire nucleus Pole cell exclusion Degraded Local terms for zyg transcripts Blastoderm nuclei Perinuclear around blastoderm nuclei Perinuclear subset of nuclei Degraded partially stage 4 Expressed Maternal |
| stage6-7 | 
 | Expressed Local terms for zyg transcripts Zygotic Blastoderm nuclei vent blastoderm nuclei Subset blastoderm nuclei Localized Subcellular localization patterns Accumlation in subset nuclei Intranuclear accumulation Nuclei-associated localization Stage 6-7 Accumlation entire nucleus post blastoderm nuclei |
| stage8-9 | 
 | Localized Subset blastoderm nuclei Accumlation entire nucleus Subcellular localization patterns Nuclei-associated localization Accumlation in subset nuclei Intranuclear accumulation Expressed Segmented pattern Zygotic Blastoderm nuclei Stage 8-9 Local terms for zyg transcripts |
| stage10- | 
 | Subcellular localization patterns CNS Brain Stage 10- Localized Zygotic Blastoderm nuclei Head Expressed Sensory sys vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | gap list_4-6:specific faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A list_7-8:specific gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | faint ubiquitous gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||