Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | oocyte somatic cells ant follicle cells post follicle cells interfollicular stalk cells enrichment_ubiquitous |
| stage8 |  s
 s
 s
 s
 s | oocyte somatic cells post follicle cells cytoplasmic foci ant follicle cells germline cells_ubiquitous |
| stage9 |  s
 s
 s
 s
 s | follicle cells follicle cells_ubiquitous germline cells_ubiquitous somatic cells |
| stage10 |  s
 s
 s
 s
 s
 s | somatic cells follicle cells_ubiquitous follicle cells germline cells_ubiquitous |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Expressed Embryonic localization patterns Annotated by Eric Medium expression (21-40ms exp) Yolk cortex exclusion Stage 1-3 Localized Exclusionary patterns Maternal |
| stage4-5 | 
 | Stage 4-5 post blastoderm nuclei Apical exclusion Blastoderm nuclei Intranuclear accumulation Nuclei-associated localization Degraded completely stage 5 Degradation maternal transcripts Accumlation entire nucleus vent blastoderm nuclei Zygotic Pole cell exclusion Degraded Degraded partially stage 4 Localized Exclusionary patterns Accumlation in subset nuclei Subcellular localization patterns Local terms for zyg transcripts Perinuclear subset of nuclei Perinuclear localization Perinuclear around blastoderm nuclei Embryonic localization patterns Expressed Subset blastoderm nuclei Maternal |
| stage6-7 | 
 | Expressed Accumlation entire nucleus Stage 6-7 Subset blastoderm nuclei Nuclei-associated localization Accumlation in subset nuclei Subcellular localization patterns Local terms for zyg transcripts post blastoderm nuclei Localized Blastoderm nuclei Intranuclear accumulation Zygotic vent blastoderm nuclei |
| stage8-9 | 
 | Segmented pattern Nuclei-associated localization Accumlation in subset nuclei Subcellular localization patterns Local terms for zyg transcripts Accumlation entire nucleus Subset blastoderm nuclei Stage 8-9 Expressed Zygotic Localized Blastoderm nuclei Intranuclear accumulation |
| stage10- | 
 | Subcellular localization patterns Head Brain Expressed Stage 10- Sensory sys Zygotic CNS Localized Blastoderm nuclei vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | list_4-6:specific faint ubiquitous gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | list_7-8:specific vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | faint ubiquitous gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||