Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | ant follicle cells enrichment_ubiquitous somatic cells oocyte interfollicular stalk cells post follicle cells |
| stage8 |  s
 s
 s
 s
 s | cytoplasmic foci oocyte germline cells_ubiquitous post follicle cells somatic cells ant follicle cells |
| stage9 |  s
 s
 s
 s
 s | follicle cells somatic cells follicle cells_ubiquitous germline cells_ubiquitous |
| stage10 |  s
 s
 s
 s
 s
 s | follicle cells somatic cells follicle cells_ubiquitous germline cells_ubiquitous |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Exclusionary patterns Annotated by Eric Yolk cortex exclusion Stage 1-3 Embryonic localization patterns Expressed Localized Medium expression (21-40ms exp) Maternal |
| stage4-5 | 
 | Nuclei-associated localization Accumlation entire nucleus Subcellular localization patterns Exclusionary patterns Degraded Degraded partially stage 4 Intranuclear accumulation Perinuclear localization Perinuclear around blastoderm nuclei Subset blastoderm nuclei Embryonic localization patterns Perinuclear subset of nuclei Expressed Degraded completely stage 5 Stage 4-5 post blastoderm nuclei Degradation maternal transcripts Zygotic Accumlation in subset nuclei Apical exclusion vent blastoderm nuclei Local terms for zyg transcripts Pole cell exclusion Blastoderm nuclei Localized Maternal |
| stage6-7 | 
 | Accumlation in subset nuclei Intranuclear accumulation post blastoderm nuclei Nuclei-associated localization Zygotic Accumlation entire nucleus Subcellular localization patterns Expressed Blastoderm nuclei Localized Stage 6-7 vent blastoderm nuclei Subset blastoderm nuclei Local terms for zyg transcripts |
| stage8-9 | 
 | Expressed Blastoderm nuclei Localized Stage 8-9 Subset blastoderm nuclei Local terms for zyg transcripts Accumlation in subset nuclei Intranuclear accumulation Nuclei-associated localization Segmented pattern Accumlation entire nucleus Zygotic Subcellular localization patterns |
| stage10- | 
 | Stage 10- Head Expressed Blastoderm nuclei Sensory sys Localized Zygotic CNS Subcellular localization patterns Brain vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | faint ubiquitous gap list_4-6:specific vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap vent nerve cord A list_7-8:specific vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | faint ubiquitous gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||