Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | somatic cells enrichment_ubiquitous interfollicular stalk cells ant follicle cells oocyte post follicle cells |
| stage8 |  s
 s
 s
 s
 s | somatic cells germline cells_ubiquitous cytoplasmic foci post follicle cells ant follicle cells oocyte |
| stage9 |  s
 s
 s
 s
 s | germline cells_ubiquitous follicle cells_ubiquitous follicle cells somatic cells |
| stage10 |  s
 s
 s
 s
 s
 s | germline cells_ubiquitous follicle cells_ubiquitous follicle cells somatic cells |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Stage 1-3 Localized Exclusionary patterns Yolk cortex exclusion Annotated by Eric Expressed Embryonic localization patterns Medium expression (21-40ms exp) Maternal |
| stage4-5 | 
 | Accumlation in subset nuclei Perinuclear localization vent blastoderm nuclei Blastoderm nuclei Stage 4-5 Embryonic localization patterns Degradation maternal transcripts Accumlation entire nucleus Local terms for zyg transcripts Degraded partially stage 4 post blastoderm nuclei Subset blastoderm nuclei Subcellular localization patterns Degraded completely stage 5 Intranuclear accumulation Degraded Expressed Nuclei-associated localization Pole cell exclusion Perinuclear around blastoderm nuclei Localized Perinuclear subset of nuclei Exclusionary patterns Zygotic Apical exclusion Maternal |
| stage6-7 | 
 | Blastoderm nuclei Intranuclear accumulation Expressed vent blastoderm nuclei Accumlation in subset nuclei Subcellular localization patterns post blastoderm nuclei Subset blastoderm nuclei Zygotic Local terms for zyg transcripts Localized Stage 6-7 Nuclei-associated localization Accumlation entire nucleus |
| stage8-9 | 
 | Subcellular localization patterns Accumlation in subset nuclei Blastoderm nuclei Stage 8-9 Intranuclear accumulation Expressed Nuclei-associated localization Accumlation entire nucleus Local terms for zyg transcripts Localized Subset blastoderm nuclei Segmented pattern Zygotic |
| stage10- | 
 | Subcellular localization patterns Blastoderm nuclei Expressed Brain Stage 10- Sensory sys Localized Head CNS Zygotic vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | list_4-6:specific faint ubiquitous gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap list_7-8:specific vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | faint ubiquitous gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||