Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | somatic cells enrichment_ubiquitous oocyte ant follicle cells post follicle cells interfollicular stalk cells |
| stage8 |  s
 s
 s
 s
 s | post follicle cells germline cells_ubiquitous cytoplasmic foci somatic cells oocyte ant follicle cells |
| stage9 |  s
 s
 s
 s
 s | germline cells_ubiquitous follicle cells follicle cells_ubiquitous somatic cells |
| stage10 |  s
 s
 s
 s
 s
 s | germline cells_ubiquitous follicle cells_ubiquitous follicle cells somatic cells |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Embryonic localization patterns Annotated by Eric Medium expression (21-40ms exp) Yolk cortex exclusion Exclusionary patterns Expressed Stage 1-3 Localized Maternal |
| stage4-5 | 
 | Local terms for zyg transcripts Perinuclear localization Stage 4-5 Exclusionary patterns Degraded Intranuclear accumulation Degraded completely stage 5 Apical exclusion post blastoderm nuclei Expressed Subset blastoderm nuclei Degraded partially stage 4 Nuclei-associated localization Zygotic vent blastoderm nuclei Embryonic localization patterns Blastoderm nuclei Accumlation entire nucleus Degradation maternal transcripts Perinuclear around blastoderm nuclei Subcellular localization patterns Localized Pole cell exclusion Accumlation in subset nuclei Perinuclear subset of nuclei Maternal |
| stage6-7 | 
 | Accumlation in subset nuclei Intranuclear accumulation Localized Subcellular localization patterns Accumlation entire nucleus Stage 6-7 vent blastoderm nuclei Blastoderm nuclei Zygotic Nuclei-associated localization Subset blastoderm nuclei Local terms for zyg transcripts post blastoderm nuclei Expressed |
| stage8-9 | 
 | Blastoderm nuclei Zygotic Nuclei-associated localization Subset blastoderm nuclei Expressed Local terms for zyg transcripts Accumlation in subset nuclei Stage 8-9 Intranuclear accumulation Segmented pattern Localized Subcellular localization patterns Accumlation entire nucleus |
| stage10- | 
 | Blastoderm nuclei CNS Zygotic Expressed Stage 10- Brain Localized Subcellular localization patterns Head Sensory sys vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | faint ubiquitous list_4-6:specific gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | list_7-8:specific vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||