Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | enrichment_ubiquitous post follicle cells oocyte ant follicle cells interfollicular stalk cells somatic cells |
| stage8 |  s
 s
 s
 s
 s | oocyte ant follicle cells somatic cells germline cells_ubiquitous cytoplasmic foci post follicle cells |
| stage9 |  s
 s
 s
 s
 s | germline cells_ubiquitous follicle cells_ubiquitous follicle cells somatic cells |
| stage10 |  s
 s
 s
 s
 s
 s | germline cells_ubiquitous somatic cells follicle cells_ubiquitous follicle cells |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Exclusionary patterns Medium expression (21-40ms exp) Localized Embryonic localization patterns Stage 1-3 Expressed Yolk cortex exclusion Annotated by Eric Maternal |
| stage4-5 | 
 | Perinuclear around blastoderm nuclei Subset blastoderm nuclei Zygotic Intranuclear accumulation Embryonic localization patterns Localized Accumlation in subset nuclei Accumlation entire nucleus post blastoderm nuclei Nuclei-associated localization Degraded completely stage 5 Blastoderm nuclei Local terms for zyg transcripts Perinuclear subset of nuclei Perinuclear localization Degraded partially stage 4 Apical exclusion Degradation maternal transcripts Exclusionary patterns Degraded Subcellular localization patterns Pole cell exclusion Expressed Stage 4-5 vent blastoderm nuclei Maternal |
| stage6-7 | 
 | vent blastoderm nuclei Local terms for zyg transcripts Blastoderm nuclei Nuclei-associated localization Expressed post blastoderm nuclei Accumlation entire nucleus Accumlation in subset nuclei Subcellular localization patterns Localized Intranuclear accumulation Stage 6-7 Zygotic Subset blastoderm nuclei |
| stage8-9 | 
 | Nuclei-associated localization Expressed Local terms for zyg transcripts Blastoderm nuclei Subset blastoderm nuclei Zygotic Segmented pattern Localized Stage 8-9 Intranuclear accumulation Subcellular localization patterns Accumlation entire nucleus Accumlation in subset nuclei |
| stage10- | 
 | Zygotic Brain Localized Stage 10- Head Subcellular localization patterns Expressed CNS Sensory sys Blastoderm nuclei vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | list_4-6:specific faint ubiquitous gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | list_7-8:specific gap vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||