Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | ant follicle cells somatic cells post follicle cells interfollicular stalk cells enrichment_ubiquitous oocyte |
| stage8 |  s
 s
 s
 s
 s | oocyte somatic cells ant follicle cells germline cells_ubiquitous post follicle cells cytoplasmic foci |
| stage9 |  s
 s
 s
 s
 s | follicle cells_ubiquitous follicle cells germline cells_ubiquitous somatic cells |
| stage10 |  s
 s
 s
 s
 s
 s | follicle cells follicle cells_ubiquitous somatic cells germline cells_ubiquitous |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Annotated by Eric Exclusionary patterns Embryonic localization patterns Expressed Localized Stage 1-3 Yolk cortex exclusion Medium expression (21-40ms exp) Maternal |
| stage4-5 | 
 | vent blastoderm nuclei Degraded completely stage 5 Degraded partially stage 4 Expressed Perinuclear subset of nuclei Zygotic Degraded Subset blastoderm nuclei Blastoderm nuclei Intranuclear accumulation Embryonic localization patterns Stage 4-5 Subcellular localization patterns Exclusionary patterns Perinuclear localization Accumlation in subset nuclei Localized Apical exclusion Degradation maternal transcripts Accumlation entire nucleus Pole cell exclusion Local terms for zyg transcripts Nuclei-associated localization post blastoderm nuclei Perinuclear around blastoderm nuclei Maternal |
| stage6-7 | 
 | Zygotic Expressed Accumlation entire nucleus Accumlation in subset nuclei Localized vent blastoderm nuclei post blastoderm nuclei Stage 6-7 Subcellular localization patterns Nuclei-associated localization Local terms for zyg transcripts Blastoderm nuclei Intranuclear accumulation Subset blastoderm nuclei |
| stage8-9 | 
 | Nuclei-associated localization Subcellular localization patterns Intranuclear accumulation Local terms for zyg transcripts Subset blastoderm nuclei Blastoderm nuclei Localized Accumlation in subset nuclei Stage 8-9 Zygotic Segmented pattern Accumlation entire nucleus Expressed |
| stage10- | 
 | Localized Expressed Sensory sys Zygotic Blastoderm nuclei Brain Subcellular localization patterns Stage 10- CNS Head vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | gap list_4-6:specific faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap list_7-8:specific vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | faint ubiquitous gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||