Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | somatic cells oocyte interfollicular stalk cells enrichment_ubiquitous ant follicle cells post follicle cells |
| stage8 |  s
 s
 s
 s
 s | somatic cells oocyte ant follicle cells germline cells_ubiquitous cytoplasmic foci post follicle cells |
| stage9 |  s
 s
 s
 s
 s | germline cells_ubiquitous follicle cells somatic cells follicle cells_ubiquitous |
| stage10 |  s
 s
 s
 s
 s
 s | germline cells_ubiquitous follicle cells_ubiquitous follicle cells somatic cells |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Embryonic localization patterns Stage 1-3 Medium expression (21-40ms exp) Yolk cortex exclusion Annotated by Eric Localized Expressed Exclusionary patterns Maternal |
| stage4-5 | 
 | Subcellular localization patterns Apical exclusion Degraded completely stage 5 Subset blastoderm nuclei vent blastoderm nuclei Stage 4-5 Perinuclear subset of nuclei Degraded Local terms for zyg transcripts Zygotic Perinuclear around blastoderm nuclei Nuclei-associated localization Intranuclear accumulation Localized post blastoderm nuclei Perinuclear localization Accumlation in subset nuclei Blastoderm nuclei Accumlation entire nucleus Embryonic localization patterns Exclusionary patterns Expressed Degraded partially stage 4 Degradation maternal transcripts Pole cell exclusion Maternal |
| stage6-7 | 
 | Expressed Nuclei-associated localization Intranuclear accumulation Localized Local terms for zyg transcripts Zygotic Stage 6-7 Accumlation in subset nuclei Blastoderm nuclei Accumlation entire nucleus post blastoderm nuclei Subcellular localization patterns Subset blastoderm nuclei vent blastoderm nuclei |
| stage8-9 | 
 | Blastoderm nuclei Accumlation entire nucleus Accumlation in subset nuclei Subset blastoderm nuclei Subcellular localization patterns Localized Intranuclear accumulation Nuclei-associated localization Expressed Segmented pattern Zygotic Local terms for zyg transcripts Stage 8-9 |
| stage10- | 
 | Brain Blastoderm nuclei Subcellular localization patterns Stage 10- Sensory sys Expressed Localized Zygotic Head CNS vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | list_4-6:specific gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap list_7-8:specific vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | faint ubiquitous gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||