Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | somatic cells enrichment_ubiquitous interfollicular stalk cells ant follicle cells post follicle cells oocyte |
| stage8 |  s
 s
 s
 s
 s | somatic cells post follicle cells oocyte germline cells_ubiquitous ant follicle cells cytoplasmic foci |
| stage9 |  s
 s
 s
 s
 s | follicle cells somatic cells follicle cells_ubiquitous germline cells_ubiquitous |
| stage10 |  s
 s
 s
 s
 s
 s | follicle cells somatic cells germline cells_ubiquitous follicle cells_ubiquitous |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Stage 1-3 Yolk cortex exclusion Expressed Exclusionary patterns Localized Embryonic localization patterns Annotated by Eric Medium expression (21-40ms exp) Maternal |
| stage4-5 | 
 | Degraded completely stage 5 Expressed Nuclei-associated localization post blastoderm nuclei Intranuclear accumulation Degradation maternal transcripts Pole cell exclusion Perinuclear around blastoderm nuclei Local terms for zyg transcripts Perinuclear subset of nuclei Subcellular localization patterns Apical exclusion Perinuclear localization Zygotic vent blastoderm nuclei Degraded partially stage 4 Accumlation in subset nuclei Exclusionary patterns Degraded Localized Subset blastoderm nuclei Embryonic localization patterns Accumlation entire nucleus Stage 4-5 Blastoderm nuclei Maternal |
| stage6-7 | 
 | Stage 6-7 Subset blastoderm nuclei Accumlation in subset nuclei Localized Nuclei-associated localization Expressed vent blastoderm nuclei Intranuclear accumulation post blastoderm nuclei Zygotic Blastoderm nuclei Local terms for zyg transcripts Subcellular localization patterns Accumlation entire nucleus |
| stage8-9 | 
 | Accumlation in subset nuclei Localized Subset blastoderm nuclei Stage 8-9 Expressed Nuclei-associated localization Segmented pattern Zygotic Intranuclear accumulation Local terms for zyg transcripts Blastoderm nuclei Subcellular localization patterns Accumlation entire nucleus |
| stage10- | 
 | Head Brain Subcellular localization patterns Blastoderm nuclei Zygotic Stage 10- Expressed Sensory sys Localized CNS vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | list_4-6:specific faint ubiquitous gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | list_7-8:specific vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | faint ubiquitous gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||