Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | oocyte post follicle cells somatic cells enrichment_ubiquitous ant follicle cells interfollicular stalk cells |
| stage8 |  s
 s
 s
 s
 s | ant follicle cells cytoplasmic foci germline cells_ubiquitous oocyte post follicle cells somatic cells |
| stage9 |  s
 s
 s
 s
 s | somatic cells follicle cells_ubiquitous germline cells_ubiquitous follicle cells |
| stage10 |  s
 s
 s
 s
 s
 s | germline cells_ubiquitous follicle cells follicle cells_ubiquitous somatic cells |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Yolk cortex exclusion Localized Expressed Annotated by Eric Exclusionary patterns Embryonic localization patterns Stage 1-3 Medium expression (21-40ms exp) Maternal |
| stage4-5 | 
 | Exclusionary patterns Degradation maternal transcripts Degraded completely stage 5 Degraded partially stage 4 Accumlation in subset nuclei Stage 4-5 post blastoderm nuclei Accumlation entire nucleus Pole cell exclusion Zygotic Nuclei-associated localization Embryonic localization patterns Blastoderm nuclei Perinuclear around blastoderm nuclei Perinuclear localization Expressed Perinuclear subset of nuclei Localized Subcellular localization patterns Apical exclusion Intranuclear accumulation Local terms for zyg transcripts Degraded vent blastoderm nuclei Subset blastoderm nuclei Maternal |
| stage6-7 | 
 | Subcellular localization patterns Zygotic Nuclei-associated localization vent blastoderm nuclei Subset blastoderm nuclei Intranuclear accumulation Local terms for zyg transcripts Stage 6-7 Blastoderm nuclei post blastoderm nuclei Localized Accumlation entire nucleus Accumlation in subset nuclei Expressed |
| stage8-9 | 
 | Accumlation entire nucleus Localized Accumlation in subset nuclei Expressed Blastoderm nuclei Nuclei-associated localization Subset blastoderm nuclei Intranuclear accumulation Local terms for zyg transcripts Subcellular localization patterns Stage 8-9 Segmented pattern Zygotic |
| stage10- | 
 | Stage 10- Brain Subcellular localization patterns Sensory sys Zygotic Head CNS Localized Expressed Blastoderm nuclei vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | gap list_4-6:specific faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A list_7-8:specific gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | faint ubiquitous gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||