Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | somatic cells interfollicular stalk cells post follicle cells enrichment_ubiquitous oocyte ant follicle cells |
| stage8 |  s
 s
 s
 s
 s | cytoplasmic foci ant follicle cells germline cells_ubiquitous oocyte post follicle cells somatic cells |
| stage9 |  s
 s
 s
 s
 s | somatic cells follicle cells_ubiquitous germline cells_ubiquitous follicle cells |
| stage10 |  s
 s
 s
 s
 s
 s | somatic cells germline cells_ubiquitous follicle cells follicle cells_ubiquitous |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Localized Stage 1-3 Medium expression (21-40ms exp) Annotated by Eric Embryonic localization patterns Exclusionary patterns Yolk cortex exclusion Expressed Maternal |
| stage4-5 | 
 | Degraded completely stage 5 Embryonic localization patterns Accumlation entire nucleus Nuclei-associated localization Perinuclear localization Pole cell exclusion Degraded Perinuclear subset of nuclei Perinuclear around blastoderm nuclei Blastoderm nuclei Localized post blastoderm nuclei Intranuclear accumulation Local terms for zyg transcripts Stage 4-5 vent blastoderm nuclei Zygotic Subset blastoderm nuclei Degraded partially stage 4 Accumlation in subset nuclei Subcellular localization patterns Expressed Exclusionary patterns Degradation maternal transcripts Apical exclusion Maternal |
| stage6-7 | 
 | Intranuclear accumulation post blastoderm nuclei Localized Accumlation entire nucleus Local terms for zyg transcripts vent blastoderm nuclei Nuclei-associated localization Blastoderm nuclei Expressed Stage 6-7 Accumlation in subset nuclei Subcellular localization patterns Subset blastoderm nuclei Zygotic |
| stage8-9 | 
 | Blastoderm nuclei Segmented pattern Intranuclear accumulation Localized Local terms for zyg transcripts Nuclei-associated localization Accumlation entire nucleus Subcellular localization patterns Accumlation in subset nuclei Subset blastoderm nuclei Zygotic Expressed Stage 8-9 |
| stage10- | 
 | Brain Blastoderm nuclei Head Stage 10- Localized Sensory sys CNS Subcellular localization patterns Zygotic Expressed vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | gap faint ubiquitous list_4-6:specific vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | list_7-8:specific gap vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | faint ubiquitous gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||