Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | enrichment_ubiquitous ant follicle cells post follicle cells interfollicular stalk cells oocyte somatic cells |
| stage8 |  s
 s
 s
 s
 s | oocyte somatic cells post follicle cells cytoplasmic foci germline cells_ubiquitous ant follicle cells |
| stage9 |  s
 s
 s
 s
 s | follicle cells somatic cells follicle cells_ubiquitous germline cells_ubiquitous |
| stage10 |  s
 s
 s
 s
 s
 s | germline cells_ubiquitous somatic cells follicle cells_ubiquitous follicle cells |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Yolk cortex exclusion Expressed Localized Medium expression (21-40ms exp) Exclusionary patterns Embryonic localization patterns Annotated by Eric Stage 1-3 Maternal |
| stage4-5 | 
 | Accumlation entire nucleus Degradation maternal transcripts Perinuclear around blastoderm nuclei Accumlation in subset nuclei vent blastoderm nuclei Apical exclusion Embryonic localization patterns Degraded partially stage 4 Perinuclear subset of nuclei Stage 4-5 Intranuclear accumulation Nuclei-associated localization Perinuclear localization Localized Zygotic Degraded Subset blastoderm nuclei post blastoderm nuclei Degraded completely stage 5 Blastoderm nuclei Exclusionary patterns Local terms for zyg transcripts Expressed Pole cell exclusion Subcellular localization patterns Maternal |
| stage6-7 | 
 | Blastoderm nuclei Intranuclear accumulation Local terms for zyg transcripts Nuclei-associated localization Accumlation in subset nuclei Accumlation entire nucleus Stage 6-7 Subset blastoderm nuclei post blastoderm nuclei vent blastoderm nuclei Zygotic Localized Expressed Subcellular localization patterns |
| stage8-9 | 
 | Expressed Stage 8-9 Subcellular localization patterns Segmented pattern Localized Zygotic Accumlation in subset nuclei Accumlation entire nucleus Subset blastoderm nuclei Local terms for zyg transcripts Nuclei-associated localization Intranuclear accumulation Blastoderm nuclei |
| stage10- | 
 | Sensory sys Stage 10- Blastoderm nuclei CNS Expressed Head Subcellular localization patterns Localized Zygotic Brain vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | faint ubiquitous gap list_4-6:specific vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap list_7-8:specific vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||