Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | somatic cells enrichment_ubiquitous interfollicular stalk cells oocyte post follicle cells ant follicle cells |
| stage8 |  s
 s
 s
 s
 s | somatic cells cytoplasmic foci germline cells_ubiquitous ant follicle cells post follicle cells oocyte |
| stage9 |  s
 s
 s
 s
 s | somatic cells follicle cells follicle cells_ubiquitous germline cells_ubiquitous |
| stage10 |  s
 s
 s
 s
 s
 s | follicle cells_ubiquitous germline cells_ubiquitous somatic cells follicle cells |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Embryonic localization patterns Localized Expressed Exclusionary patterns Annotated by Eric Medium expression (21-40ms exp) Stage 1-3 Yolk cortex exclusion Maternal |
| stage4-5 | 
 | Degraded completely stage 5 Intranuclear accumulation Accumlation entire nucleus Accumlation in subset nuclei Zygotic post blastoderm nuclei Embryonic localization patterns Apical exclusion vent blastoderm nuclei Blastoderm nuclei Stage 4-5 Degraded Subset blastoderm nuclei Localized Subcellular localization patterns Local terms for zyg transcripts Perinuclear subset of nuclei Perinuclear around blastoderm nuclei Nuclei-associated localization Degradation maternal transcripts Degraded partially stage 4 Pole cell exclusion Perinuclear localization Exclusionary patterns Expressed Maternal |
| stage6-7 | 
 | Blastoderm nuclei vent blastoderm nuclei Subcellular localization patterns Localized Expressed Subset blastoderm nuclei Accumlation in subset nuclei Stage 6-7 Nuclei-associated localization Accumlation entire nucleus Local terms for zyg transcripts Intranuclear accumulation post blastoderm nuclei Zygotic |
| stage8-9 | 
 | Intranuclear accumulation Local terms for zyg transcripts Segmented pattern Accumlation entire nucleus Nuclei-associated localization Accumlation in subset nuclei Stage 8-9 Zygotic Blastoderm nuclei Subset blastoderm nuclei Expressed Localized Subcellular localization patterns |
| stage10- | 
 | Sensory sys Stage 10- Zygotic CNS Blastoderm nuclei Head Localized Subcellular localization patterns Expressed Brain vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | faint ubiquitous gap list_4-6:specific vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | list_7-8:specific gap vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | faint ubiquitous gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||