Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | ant follicle cells interfollicular stalk cells oocyte somatic cells post follicle cells enrichment_ubiquitous |
| stage8 |  s
 s
 s
 s
 s | cytoplasmic foci oocyte somatic cells post follicle cells germline cells_ubiquitous ant follicle cells |
| stage9 |  s
 s
 s
 s
 s | follicle cells somatic cells follicle cells_ubiquitous germline cells_ubiquitous |
| stage10 |  s
 s
 s
 s
 s
 s | follicle cells_ubiquitous somatic cells germline cells_ubiquitous follicle cells |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Exclusionary patterns Localized Medium expression (21-40ms exp) Embryonic localization patterns Stage 1-3 Yolk cortex exclusion Expressed Annotated by Eric Maternal |
| stage4-5 | 
 | Stage 4-5 Pole cell exclusion Apical exclusion Expressed Degraded partially stage 4 Degraded completely stage 5 post blastoderm nuclei Perinuclear localization Degraded Perinuclear subset of nuclei Nuclei-associated localization Subcellular localization patterns vent blastoderm nuclei Blastoderm nuclei Perinuclear around blastoderm nuclei Degradation maternal transcripts Accumlation entire nucleus Exclusionary patterns Intranuclear accumulation Zygotic Accumlation in subset nuclei Local terms for zyg transcripts Subset blastoderm nuclei Embryonic localization patterns Localized Maternal |
| stage6-7 | 
 | post blastoderm nuclei Nuclei-associated localization Localized Subcellular localization patterns Zygotic Intranuclear accumulation Stage 6-7 Local terms for zyg transcripts Accumlation in subset nuclei Subset blastoderm nuclei vent blastoderm nuclei Blastoderm nuclei Expressed Accumlation entire nucleus |
| stage8-9 | 
 | Local terms for zyg transcripts Accumlation in subset nuclei Subset blastoderm nuclei Segmented pattern Intranuclear accumulation Zygotic Localized Nuclei-associated localization Subcellular localization patterns Stage 8-9 Accumlation entire nucleus Expressed Blastoderm nuclei |
| stage10- | 
 | Sensory sys Blastoderm nuclei CNS Head Expressed Brain Stage 10- Zygotic Subcellular localization patterns Localized vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | list_4-6:specific gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap list_7-8:specific vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||