Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | oocyte post follicle cells somatic cells enrichment_ubiquitous ant follicle cells interfollicular stalk cells |
| stage8 |  s
 s
 s
 s
 s | oocyte germline cells_ubiquitous post follicle cells somatic cells ant follicle cells cytoplasmic foci |
| stage9 |  s
 s
 s
 s
 s | germline cells_ubiquitous follicle cells_ubiquitous somatic cells follicle cells |
| stage10 |  s
 s
 s
 s
 s
 s | germline cells_ubiquitous follicle cells_ubiquitous somatic cells follicle cells |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Expressed Embryonic localization patterns Yolk cortex exclusion Medium expression (21-40ms exp) Localized Stage 1-3 Exclusionary patterns Annotated by Eric Maternal |
| stage4-5 | 
 | Zygotic Subset blastoderm nuclei Pole cell exclusion Degraded partially stage 4 post blastoderm nuclei Accumlation in subset nuclei Perinuclear around blastoderm nuclei Perinuclear subset of nuclei Degradation maternal transcripts Stage 4-5 Expressed Embryonic localization patterns vent blastoderm nuclei Localized Nuclei-associated localization Local terms for zyg transcripts Intranuclear accumulation Blastoderm nuclei Accumlation entire nucleus Apical exclusion Degraded Subcellular localization patterns Perinuclear localization Exclusionary patterns Degraded completely stage 5 Maternal |
| stage6-7 | 
 | Subcellular localization patterns Accumlation in subset nuclei Stage 6-7 Zygotic Expressed Intranuclear accumulation Local terms for zyg transcripts post blastoderm nuclei Accumlation entire nucleus Blastoderm nuclei vent blastoderm nuclei Localized Nuclei-associated localization Subset blastoderm nuclei |
| stage8-9 | 
 | Stage 8-9 Subcellular localization patterns Accumlation in subset nuclei Intranuclear accumulation Local terms for zyg transcripts Accumlation entire nucleus Blastoderm nuclei Localized Nuclei-associated localization Subset blastoderm nuclei Zygotic Expressed Segmented pattern |
| stage10- | 
 | Zygotic Expressed Head CNS Blastoderm nuclei Stage 10- Localized Subcellular localization patterns Sensory sys Brain vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | gap list_4-6:specific faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap vent nerve cord A list_7-8:specific vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||