Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | somatic cells interfollicular stalk cells oocyte post follicle cells enrichment_ubiquitous ant follicle cells |
| stage8 |  s
 s
 s
 s
 s | ant follicle cells germline cells_ubiquitous oocyte post follicle cells somatic cells cytoplasmic foci |
| stage9 |  s
 s
 s
 s
 s | follicle cells_ubiquitous follicle cells germline cells_ubiquitous somatic cells |
| stage10 |  s
 s
 s
 s
 s
 s | follicle cells_ubiquitous follicle cells somatic cells germline cells_ubiquitous |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Exclusionary patterns Annotated by Eric Expressed Localized Yolk cortex exclusion Embryonic localization patterns Medium expression (21-40ms exp) Stage 1-3 Maternal |
| stage4-5 | 
 | Blastoderm nuclei Pole cell exclusion Local terms for zyg transcripts Accumlation entire nucleus Subset blastoderm nuclei Zygotic Subcellular localization patterns Degradation maternal transcripts Exclusionary patterns Perinuclear localization Apical exclusion vent blastoderm nuclei post blastoderm nuclei Perinuclear around blastoderm nuclei Embryonic localization patterns Accumlation in subset nuclei Perinuclear subset of nuclei Localized Expressed Intranuclear accumulation Nuclei-associated localization Degraded partially stage 4 Degraded completely stage 5 Stage 4-5 Degraded Maternal |
| stage6-7 | 
 | Subcellular localization patterns Zygotic post blastoderm nuclei vent blastoderm nuclei Blastoderm nuclei Stage 6-7 Accumlation in subset nuclei Intranuclear accumulation Nuclei-associated localization Local terms for zyg transcripts Localized Subset blastoderm nuclei Accumlation entire nucleus Expressed |
| stage8-9 | 
 | Blastoderm nuclei Accumlation in subset nuclei Localized Local terms for zyg transcripts Accumlation entire nucleus Subset blastoderm nuclei Expressed Intranuclear accumulation Nuclei-associated localization Zygotic Subcellular localization patterns Segmented pattern Stage 8-9 |
| stage10- | 
 | CNS Stage 10- Blastoderm nuclei Brain Localized Expressed Head Zygotic Subcellular localization patterns Sensory sys vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | faint ubiquitous gap list_4-6:specific vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | list_7-8:specific gap vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | faint ubiquitous gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||