Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | ant follicle cells enrichment_ubiquitous interfollicular stalk cells post follicle cells oocyte somatic cells |
| stage8 |  s
 s
 s
 s
 s | germline cells_ubiquitous somatic cells oocyte cytoplasmic foci post follicle cells ant follicle cells |
| stage9 |  s
 s
 s
 s
 s | follicle cells follicle cells_ubiquitous germline cells_ubiquitous somatic cells |
| stage10 |  s
 s
 s
 s
 s
 s | somatic cells germline cells_ubiquitous follicle cells_ubiquitous follicle cells |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Medium expression (21-40ms exp) Stage 1-3 Annotated by Eric Exclusionary patterns Yolk cortex exclusion Expressed Localized Embryonic localization patterns Maternal |
| stage4-5 | 
 | Degraded completely stage 5 Zygotic Perinuclear localization Local terms for zyg transcripts Nuclei-associated localization Degraded partially stage 4 Intranuclear accumulation Degraded Perinuclear around blastoderm nuclei Exclusionary patterns Pole cell exclusion Stage 4-5 Subcellular localization patterns Apical exclusion Accumlation in subset nuclei vent blastoderm nuclei Localized Perinuclear subset of nuclei Expressed Embryonic localization patterns Degradation maternal transcripts Accumlation entire nucleus Subset blastoderm nuclei post blastoderm nuclei Blastoderm nuclei Maternal |
| stage6-7 | 
 | Stage 6-7 Intranuclear accumulation post blastoderm nuclei Blastoderm nuclei Accumlation entire nucleus Subset blastoderm nuclei Subcellular localization patterns Accumlation in subset nuclei Zygotic vent blastoderm nuclei Localized Expressed Local terms for zyg transcripts Nuclei-associated localization |
| stage8-9 | 
 | Subset blastoderm nuclei Accumlation entire nucleus Local terms for zyg transcripts Nuclei-associated localization Localized Expressed Zygotic Accumlation in subset nuclei Subcellular localization patterns Blastoderm nuclei Stage 8-9 Intranuclear accumulation Segmented pattern |
| stage10- | 
 | Localized Brain Expressed Sensory sys Subcellular localization patterns Zygotic Head CNS Blastoderm nuclei Stage 10- vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | list_4-6:specific gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | list_7-8:specific vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||