Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | enrichment_ubiquitous post follicle cells oocyte interfollicular stalk cells somatic cells ant follicle cells |
| stage8 |  s
 s
 s
 s
 s | post follicle cells oocyte somatic cells germline cells_ubiquitous cytoplasmic foci ant follicle cells |
| stage9 |  s
 s
 s
 s
 s | somatic cells germline cells_ubiquitous follicle cells follicle cells_ubiquitous |
| stage10 |  s
 s
 s
 s
 s
 s | somatic cells germline cells_ubiquitous follicle cells follicle cells_ubiquitous |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Localized Exclusionary patterns Expressed Stage 1-3 Annotated by Eric Medium expression (21-40ms exp) Yolk cortex exclusion Embryonic localization patterns Maternal |
| stage4-5 | 
 | Blastoderm nuclei Perinuclear localization Expressed Perinuclear around blastoderm nuclei Degradation maternal transcripts Degraded completely stage 5 Localized Perinuclear subset of nuclei Accumlation entire nucleus Degraded partially stage 4 Nuclei-associated localization Subcellular localization patterns Stage 4-5 Local terms for zyg transcripts Exclusionary patterns Degraded vent blastoderm nuclei Intranuclear accumulation Accumlation in subset nuclei Zygotic post blastoderm nuclei Apical exclusion Pole cell exclusion Embryonic localization patterns Subset blastoderm nuclei Maternal |
| stage6-7 | 
 | Expressed Local terms for zyg transcripts vent blastoderm nuclei Localized Blastoderm nuclei Accumlation entire nucleus Nuclei-associated localization Subcellular localization patterns post blastoderm nuclei Stage 6-7 Subset blastoderm nuclei Intranuclear accumulation Zygotic Accumlation in subset nuclei |
| stage8-9 | 
 | Segmented pattern Subset blastoderm nuclei Intranuclear accumulation Accumlation in subset nuclei Zygotic Local terms for zyg transcripts Expressed Accumlation entire nucleus Blastoderm nuclei Localized Subcellular localization patterns Nuclei-associated localization Stage 8-9 |
| stage10- | 
 | Expressed Head Subcellular localization patterns Localized Blastoderm nuclei Brain Sensory sys Stage 10- Zygotic CNS vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | list_4-6:specific faint ubiquitous gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A list_7-8:specific gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||