Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | ant follicle cells somatic cells oocyte enrichment_ubiquitous interfollicular stalk cells post follicle cells |
| stage8 |  s
 s
 s
 s
 s | cytoplasmic foci ant follicle cells germline cells_ubiquitous somatic cells oocyte post follicle cells |
| stage9 |  s
 s
 s
 s
 s | germline cells_ubiquitous follicle cells somatic cells follicle cells_ubiquitous |
| stage10 |  s
 s
 s
 s
 s
 s | follicle cells_ubiquitous follicle cells somatic cells germline cells_ubiquitous |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Localized Exclusionary patterns Stage 1-3 Annotated by Eric Embryonic localization patterns Expressed Medium expression (21-40ms exp) Yolk cortex exclusion Maternal |
| stage4-5 | 
 | Embryonic localization patterns Degraded completely stage 5 Nuclei-associated localization Accumlation in subset nuclei Subset blastoderm nuclei Degradation maternal transcripts Perinuclear subset of nuclei vent blastoderm nuclei Expressed Degraded Zygotic Subcellular localization patterns Degraded partially stage 4 Apical exclusion Accumlation entire nucleus Stage 4-5 Intranuclear accumulation Local terms for zyg transcripts Exclusionary patterns post blastoderm nuclei Perinuclear localization Blastoderm nuclei Perinuclear around blastoderm nuclei Localized Pole cell exclusion Maternal |
| stage6-7 | 
 | Local terms for zyg transcripts post blastoderm nuclei Accumlation in subset nuclei Blastoderm nuclei Localized Subset blastoderm nuclei Stage 6-7 vent blastoderm nuclei Zygotic Expressed Accumlation entire nucleus Subcellular localization patterns Intranuclear accumulation Nuclei-associated localization |
| stage8-9 | 
 | Expressed Zygotic Subcellular localization patterns Accumlation entire nucleus Nuclei-associated localization Intranuclear accumulation Local terms for zyg transcripts Blastoderm nuclei Localized Segmented pattern Accumlation in subset nuclei Subset blastoderm nuclei Stage 8-9 |
| stage10- | 
 | Brain Head Blastoderm nuclei Localized Stage 10- Subcellular localization patterns CNS Sensory sys Expressed Zygotic vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | gap list_4-6:specific faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A list_7-8:specific gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||