Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | ant follicle cells oocyte interfollicular stalk cells enrichment_ubiquitous post follicle cells somatic cells |
| stage8 |  s
 s
 s
 s
 s | somatic cells post follicle cells cytoplasmic foci ant follicle cells oocyte germline cells_ubiquitous |
| stage9 |  s
 s
 s
 s
 s | germline cells_ubiquitous follicle cells somatic cells follicle cells_ubiquitous |
| stage10 |  s
 s
 s
 s
 s
 s | germline cells_ubiquitous follicle cells_ubiquitous follicle cells somatic cells |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Embryonic localization patterns Stage 1-3 Exclusionary patterns Medium expression (21-40ms exp) Expressed Localized Yolk cortex exclusion Annotated by Eric Maternal |
| stage4-5 | 
 | Stage 4-5 Subcellular localization patterns Accumlation in subset nuclei Blastoderm nuclei Degraded Nuclei-associated localization Degraded completely stage 5 post blastoderm nuclei Intranuclear accumulation Embryonic localization patterns Accumlation entire nucleus vent blastoderm nuclei Local terms for zyg transcripts Expressed Subset blastoderm nuclei Degraded partially stage 4 Zygotic Perinuclear around blastoderm nuclei Localized Apical exclusion Perinuclear subset of nuclei Pole cell exclusion Perinuclear localization Degradation maternal transcripts Exclusionary patterns Maternal |
| stage6-7 | 
 | Subcellular localization patterns Localized Blastoderm nuclei Zygotic Accumlation in subset nuclei Nuclei-associated localization Intranuclear accumulation post blastoderm nuclei vent blastoderm nuclei Accumlation entire nucleus Local terms for zyg transcripts Expressed Subset blastoderm nuclei Stage 6-7 |
| stage8-9 | 
 | Subcellular localization patterns Accumlation in subset nuclei Zygotic Blastoderm nuclei Localized Nuclei-associated localization Intranuclear accumulation Accumlation entire nucleus Segmented pattern Local terms for zyg transcripts Stage 8-9 Subset blastoderm nuclei Expressed |
| stage10- | 
 | Stage 10- CNS Expressed Brain Localized Blastoderm nuclei Zygotic Sensory sys Subcellular localization patterns Head vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | list_4-6:specific gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | list_7-8:specific gap vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | faint ubiquitous gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||