Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | enrichment_ubiquitous post follicle cells interfollicular stalk cells ant follicle cells somatic cells oocyte |
| stage8 |  s
 s
 s
 s
 s | somatic cells oocyte ant follicle cells post follicle cells germline cells_ubiquitous cytoplasmic foci |
| stage9 |  s
 s
 s
 s
 s | follicle cells germline cells_ubiquitous follicle cells_ubiquitous somatic cells |
| stage10 |  s
 s
 s
 s
 s
 s | follicle cells_ubiquitous somatic cells follicle cells germline cells_ubiquitous |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Annotated by Eric Embryonic localization patterns Expressed Yolk cortex exclusion Stage 1-3 Exclusionary patterns Localized Medium expression (21-40ms exp) Maternal |
| stage4-5 | 
 | vent blastoderm nuclei Expressed Degraded Local terms for zyg transcripts Subset blastoderm nuclei Perinuclear localization Zygotic post blastoderm nuclei Localized Accumlation in subset nuclei Degraded completely stage 5 Subcellular localization patterns Embryonic localization patterns Degradation maternal transcripts Blastoderm nuclei Perinuclear subset of nuclei Degraded partially stage 4 Pole cell exclusion Intranuclear accumulation Perinuclear around blastoderm nuclei Accumlation entire nucleus Apical exclusion Nuclei-associated localization Exclusionary patterns Stage 4-5 Maternal |
| stage6-7 | 
 | Accumlation entire nucleus Zygotic post blastoderm nuclei Localized Accumlation in subset nuclei Nuclei-associated localization Stage 6-7 Subcellular localization patterns vent blastoderm nuclei Expressed Blastoderm nuclei Local terms for zyg transcripts Subset blastoderm nuclei Intranuclear accumulation |
| stage8-9 | 
 | Accumlation entire nucleus Zygotic Nuclei-associated localization Accumlation in subset nuclei Localized Stage 8-9 Expressed Subcellular localization patterns Segmented pattern Local terms for zyg transcripts Blastoderm nuclei Intranuclear accumulation Subset blastoderm nuclei |
| stage10- | 
 | CNS Zygotic Localized Brain Sensory sys Head Subcellular localization patterns Stage 10- Expressed Blastoderm nuclei vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | gap faint ubiquitous list_4-6:specific vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | list_7-8:specific gap vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||