Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | ant follicle cells enrichment_ubiquitous oocyte somatic cells post follicle cells interfollicular stalk cells |
| stage8 |  s
 s
 s
 s
 s | germline cells_ubiquitous oocyte post follicle cells somatic cells ant follicle cells cytoplasmic foci |
| stage9 |  s
 s
 s
 s
 s | follicle cells_ubiquitous follicle cells somatic cells germline cells_ubiquitous |
| stage10 |  s
 s
 s
 s
 s
 s | follicle cells follicle cells_ubiquitous germline cells_ubiquitous somatic cells |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Annotated by Eric Stage 1-3 Exclusionary patterns Embryonic localization patterns Medium expression (21-40ms exp) Expressed Localized Yolk cortex exclusion Maternal |
| stage4-5 | 
 | Perinuclear subset of nuclei Subcellular localization patterns Accumlation in subset nuclei Degradation maternal transcripts Local terms for zyg transcripts Perinuclear localization Stage 4-5 post blastoderm nuclei Exclusionary patterns Embryonic localization patterns vent blastoderm nuclei Expressed Degraded Localized Pole cell exclusion Blastoderm nuclei Subset blastoderm nuclei Degraded partially stage 4 Perinuclear around blastoderm nuclei Intranuclear accumulation Accumlation entire nucleus Zygotic Degraded completely stage 5 Nuclei-associated localization Apical exclusion Maternal |
| stage6-7 | 
 | Local terms for zyg transcripts Stage 6-7 Accumlation entire nucleus Accumlation in subset nuclei Subset blastoderm nuclei Intranuclear accumulation Subcellular localization patterns Blastoderm nuclei Expressed Localized vent blastoderm nuclei Nuclei-associated localization post blastoderm nuclei Zygotic |
| stage8-9 | 
 | Local terms for zyg transcripts Accumlation in subset nuclei Accumlation entire nucleus Subcellular localization patterns Intranuclear accumulation Subset blastoderm nuclei Segmented pattern Blastoderm nuclei Localized Expressed Nuclei-associated localization Zygotic Stage 8-9 |
| stage10- | 
 | Zygotic Head Stage 10- Expressed Localized Blastoderm nuclei Sensory sys Subcellular localization patterns Brain CNS vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | faint ubiquitous gap list_4-6:specific vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap list_7-8:specific vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||