Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | enrichment_ubiquitous oocyte ant follicle cells post follicle cells interfollicular stalk cells somatic cells |
| stage8 |  s
 s
 s
 s
 s | somatic cells post follicle cells ant follicle cells oocyte germline cells_ubiquitous cytoplasmic foci |
| stage9 |  s
 s
 s
 s
 s | germline cells_ubiquitous follicle cells somatic cells follicle cells_ubiquitous |
| stage10 |  s
 s
 s
 s
 s
 s | somatic cells follicle cells_ubiquitous germline cells_ubiquitous follicle cells |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Annotated by Eric Yolk cortex exclusion Embryonic localization patterns Expressed Medium expression (21-40ms exp) Stage 1-3 Exclusionary patterns Localized Maternal |
| stage4-5 | 
 | post blastoderm nuclei Blastoderm nuclei Stage 4-5 Degraded partially stage 4 Subset blastoderm nuclei Nuclei-associated localization Local terms for zyg transcripts Accumlation in subset nuclei Accumlation entire nucleus Embryonic localization patterns Degraded Intranuclear accumulation Degradation maternal transcripts Exclusionary patterns Localized Subcellular localization patterns vent blastoderm nuclei Apical exclusion Zygotic Perinuclear localization Degraded completely stage 5 Perinuclear subset of nuclei Perinuclear around blastoderm nuclei Expressed Pole cell exclusion Maternal |
| stage6-7 | 
 | vent blastoderm nuclei Stage 6-7 Subset blastoderm nuclei Subcellular localization patterns Localized Blastoderm nuclei Intranuclear accumulation post blastoderm nuclei Expressed Accumlation entire nucleus Accumlation in subset nuclei Local terms for zyg transcripts Nuclei-associated localization Zygotic |
| stage8-9 | 
 | Stage 8-9 Intranuclear accumulation Segmented pattern Blastoderm nuclei Localized Subcellular localization patterns Subset blastoderm nuclei Accumlation in subset nuclei Local terms for zyg transcripts Nuclei-associated localization Zygotic Accumlation entire nucleus Expressed |
| stage10- | 
 | Blastoderm nuclei Localized Subcellular localization patterns Brain Stage 10- CNS Expressed Sensory sys Zygotic Head vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | list_4-6:specific gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap list_7-8:specific vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | faint ubiquitous gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||