Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | post follicle cells interfollicular stalk cells somatic cells ant follicle cells oocyte enrichment_ubiquitous |
| stage8 |  s
 s
 s
 s
 s | ant follicle cells cytoplasmic foci somatic cells post follicle cells germline cells_ubiquitous oocyte |
| stage9 |  s
 s
 s
 s
 s | follicle cells follicle cells_ubiquitous somatic cells germline cells_ubiquitous |
| stage10 |  s
 s
 s
 s
 s
 s | germline cells_ubiquitous somatic cells follicle cells follicle cells_ubiquitous |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Embryonic localization patterns Expressed Exclusionary patterns Annotated by Eric Medium expression (21-40ms exp) Yolk cortex exclusion Localized Stage 1-3 Maternal |
| stage4-5 | 
 | Exclusionary patterns Degraded partially stage 4 Intranuclear accumulation vent blastoderm nuclei Stage 4-5 Subcellular localization patterns Perinuclear localization Perinuclear subset of nuclei Accumlation in subset nuclei post blastoderm nuclei Blastoderm nuclei Pole cell exclusion Perinuclear around blastoderm nuclei Expressed Embryonic localization patterns Apical exclusion Nuclei-associated localization Accumlation entire nucleus Subset blastoderm nuclei Degraded Localized Zygotic Degradation maternal transcripts Degraded completely stage 5 Local terms for zyg transcripts Maternal |
| stage6-7 | 
 | post blastoderm nuclei Accumlation in subset nuclei Expressed Blastoderm nuclei Intranuclear accumulation Nuclei-associated localization Accumlation entire nucleus vent blastoderm nuclei Subset blastoderm nuclei Subcellular localization patterns Localized Zygotic Stage 6-7 Local terms for zyg transcripts |
| stage8-9 | 
 | Local terms for zyg transcripts Localized Zygotic Subcellular localization patterns Intranuclear accumulation Nuclei-associated localization Accumlation entire nucleus Segmented pattern Subset blastoderm nuclei Stage 8-9 Accumlation in subset nuclei Blastoderm nuclei Expressed |
| stage10- | 
 | Brain Head Subcellular localization patterns CNS Zygotic Localized Stage 10- Blastoderm nuclei Expressed Sensory sys vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | faint ubiquitous list_4-6:specific gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | list_7-8:specific vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||