Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | oocyte ant follicle cells interfollicular stalk cells post follicle cells enrichment_ubiquitous somatic cells |
| stage8 |  s
 s
 s
 s
 s | oocyte post follicle cells somatic cells ant follicle cells cytoplasmic foci germline cells_ubiquitous |
| stage9 |  s
 s
 s
 s
 s | follicle cells follicle cells_ubiquitous germline cells_ubiquitous somatic cells |
| stage10 |  s
 s
 s
 s
 s
 s | germline cells_ubiquitous follicle cells_ubiquitous follicle cells somatic cells |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Embryonic localization patterns Localized Expressed Stage 1-3 Medium expression (21-40ms exp) Exclusionary patterns Annotated by Eric Yolk cortex exclusion Maternal |
| stage4-5 | 
 | Perinuclear around blastoderm nuclei Degraded partially stage 4 Subset blastoderm nuclei Perinuclear localization Degradation maternal transcripts Apical exclusion Expressed Blastoderm nuclei Accumlation in subset nuclei Localized Intranuclear accumulation Degraded completely stage 5 Accumlation entire nucleus Embryonic localization patterns Exclusionary patterns Stage 4-5 Perinuclear subset of nuclei vent blastoderm nuclei post blastoderm nuclei Pole cell exclusion Zygotic Subcellular localization patterns Nuclei-associated localization Local terms for zyg transcripts Degraded Maternal |
| stage6-7 | 
 | Localized Blastoderm nuclei Accumlation in subset nuclei Expressed Zygotic Intranuclear accumulation Subcellular localization patterns Nuclei-associated localization Accumlation entire nucleus Local terms for zyg transcripts Stage 6-7 Subset blastoderm nuclei vent blastoderm nuclei post blastoderm nuclei |
| stage8-9 | 
 | Subset blastoderm nuclei Stage 8-9 Segmented pattern Accumlation in subset nuclei Expressed Zygotic Blastoderm nuclei Localized Intranuclear accumulation Nuclei-associated localization Subcellular localization patterns Local terms for zyg transcripts Accumlation entire nucleus |
| stage10- | 
 | Blastoderm nuclei Expressed Zygotic Localized Head Brain Sensory sys Subcellular localization patterns Stage 10- CNS vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | faint ubiquitous list_4-6:specific gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap list_7-8:specific vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | faint ubiquitous gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||