Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | post follicle cells ant follicle cells oocyte somatic cells enrichment_ubiquitous interfollicular stalk cells |
| stage8 |  s
 s
 s
 s
 s | oocyte somatic cells germline cells_ubiquitous cytoplasmic foci post follicle cells ant follicle cells |
| stage9 |  s
 s
 s
 s
 s | follicle cells_ubiquitous follicle cells germline cells_ubiquitous somatic cells |
| stage10 |  s
 s
 s
 s
 s
 s | follicle cells germline cells_ubiquitous somatic cells follicle cells_ubiquitous |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Exclusionary patterns Stage 1-3 Annotated by Eric Expressed Localized Embryonic localization patterns Medium expression (21-40ms exp) Yolk cortex exclusion Maternal |
| stage4-5 | 
 | Degraded partially stage 4 Perinuclear localization Exclusionary patterns Nuclei-associated localization Expressed Stage 4-5 Perinuclear subset of nuclei Blastoderm nuclei Pole cell exclusion vent blastoderm nuclei Subcellular localization patterns Accumlation entire nucleus post blastoderm nuclei Degradation maternal transcripts Accumlation in subset nuclei Local terms for zyg transcripts Apical exclusion Zygotic Intranuclear accumulation Embryonic localization patterns Localized Perinuclear around blastoderm nuclei Degraded Degraded completely stage 5 Subset blastoderm nuclei Maternal |
| stage6-7 | 
 | Stage 6-7 Accumlation in subset nuclei Local terms for zyg transcripts Nuclei-associated localization Expressed Zygotic Intranuclear accumulation Localized Blastoderm nuclei Subcellular localization patterns vent blastoderm nuclei Accumlation entire nucleus post blastoderm nuclei Subset blastoderm nuclei |
| stage8-9 | 
 | Segmented pattern Intranuclear accumulation Localized Accumlation entire nucleus Subset blastoderm nuclei Blastoderm nuclei Subcellular localization patterns Stage 8-9 Accumlation in subset nuclei Nuclei-associated localization Expressed Zygotic Local terms for zyg transcripts |
| stage10- | 
 | Stage 10- Head Expressed Zygotic CNS Subcellular localization patterns Blastoderm nuclei Localized Sensory sys Brain vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | gap faint ubiquitous list_4-6:specific vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | list_7-8:specific vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | faint ubiquitous gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||