Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | ant follicle cells post follicle cells enrichment_ubiquitous somatic cells oocyte interfollicular stalk cells |
| stage8 |  s
 s
 s
 s
 s | somatic cells germline cells_ubiquitous oocyte ant follicle cells cytoplasmic foci post follicle cells |
| stage9 |  s
 s
 s
 s
 s | follicle cells follicle cells_ubiquitous germline cells_ubiquitous somatic cells |
| stage10 |  s
 s
 s
 s
 s
 s | somatic cells germline cells_ubiquitous follicle cells_ubiquitous follicle cells |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Localized Exclusionary patterns Medium expression (21-40ms exp) Yolk cortex exclusion Embryonic localization patterns Expressed Annotated by Eric Stage 1-3 Maternal |
| stage4-5 | 
 | Apical exclusion Degraded Degraded completely stage 5 Perinuclear around blastoderm nuclei Accumlation entire nucleus Accumlation in subset nuclei Perinuclear subset of nuclei Pole cell exclusion Degraded partially stage 4 Stage 4-5 post blastoderm nuclei Nuclei-associated localization Subcellular localization patterns Expressed Zygotic Blastoderm nuclei Degradation maternal transcripts Intranuclear accumulation Perinuclear localization Embryonic localization patterns vent blastoderm nuclei Localized Local terms for zyg transcripts Exclusionary patterns Subset blastoderm nuclei Maternal |
| stage6-7 | 
 | Stage 6-7 vent blastoderm nuclei Localized Local terms for zyg transcripts Subset blastoderm nuclei post blastoderm nuclei Expressed Subcellular localization patterns Nuclei-associated localization Blastoderm nuclei Zygotic Accumlation entire nucleus Accumlation in subset nuclei Intranuclear accumulation |
| stage8-9 | 
 | Stage 8-9 Nuclei-associated localization Expressed Subcellular localization patterns Zygotic Blastoderm nuclei Accumlation entire nucleus Intranuclear accumulation Accumlation in subset nuclei Localized Segmented pattern Local terms for zyg transcripts Subset blastoderm nuclei |
| stage10- | 
 | Blastoderm nuclei Zygotic Brain Subcellular localization patterns Expressed Stage 10- Head Sensory sys Localized CNS vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | gap faint ubiquitous list_4-6:specific vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap list_7-8:specific vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||