Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | enrichment_ubiquitous oocyte interfollicular stalk cells somatic cells ant follicle cells post follicle cells |
| stage8 |  s
 s
 s
 s
 s | oocyte somatic cells ant follicle cells post follicle cells cytoplasmic foci germline cells_ubiquitous |
| stage9 |  s
 s
 s
 s
 s | germline cells_ubiquitous follicle cells follicle cells_ubiquitous somatic cells |
| stage10 |  s
 s
 s
 s
 s
 s | somatic cells follicle cells_ubiquitous follicle cells germline cells_ubiquitous |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Annotated by Eric Exclusionary patterns Medium expression (21-40ms exp) Localized Expressed Stage 1-3 Yolk cortex exclusion Embryonic localization patterns Maternal |
| stage4-5 | 
 | Zygotic Embryonic localization patterns Perinuclear around blastoderm nuclei Accumlation in subset nuclei Nuclei-associated localization Exclusionary patterns Pole cell exclusion Subset blastoderm nuclei Apical exclusion Blastoderm nuclei post blastoderm nuclei Intranuclear accumulation Localized Stage 4-5 Subcellular localization patterns Local terms for zyg transcripts vent blastoderm nuclei Perinuclear subset of nuclei Perinuclear localization Degradation maternal transcripts Degraded Accumlation entire nucleus Expressed Degraded completely stage 5 Degraded partially stage 4 Maternal |
| stage6-7 | 
 | Zygotic Local terms for zyg transcripts Accumlation in subset nuclei vent blastoderm nuclei Nuclei-associated localization Accumlation entire nucleus Subset blastoderm nuclei Expressed Blastoderm nuclei Localized post blastoderm nuclei Intranuclear accumulation Stage 6-7 Subcellular localization patterns |
| stage8-9 | 
 | Zygotic Accumlation in subset nuclei Local terms for zyg transcripts Nuclei-associated localization Accumlation entire nucleus Segmented pattern Intranuclear accumulation Localized Expressed Blastoderm nuclei Subset blastoderm nuclei Subcellular localization patterns Stage 8-9 |
| stage10- | 
 | Zygotic Sensory sys Brain CNS Stage 10- Head Subcellular localization patterns Expressed Blastoderm nuclei Localized vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | gap list_4-6:specific faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | list_7-8:specific vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | faint ubiquitous gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||