Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | post follicle cells interfollicular stalk cells enrichment_ubiquitous oocyte ant follicle cells somatic cells |
| stage8 |  s
 s
 s
 s
 s | cytoplasmic foci post follicle cells somatic cells ant follicle cells oocyte germline cells_ubiquitous |
| stage9 |  s
 s
 s
 s
 s | germline cells_ubiquitous follicle cells follicle cells_ubiquitous somatic cells |
| stage10 |  s
 s
 s
 s
 s
 s | germline cells_ubiquitous follicle cells somatic cells follicle cells_ubiquitous |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Medium expression (21-40ms exp) Stage 1-3 Localized Expressed Annotated by Eric Embryonic localization patterns Exclusionary patterns Yolk cortex exclusion Maternal |
| stage4-5 | 
 | Stage 4-5 Subcellular localization patterns Exclusionary patterns Degradation maternal transcripts Subset blastoderm nuclei Perinuclear localization Localized vent blastoderm nuclei Expressed Degraded partially stage 4 Perinuclear around blastoderm nuclei Perinuclear subset of nuclei Nuclei-associated localization Degraded completely stage 5 Zygotic Intranuclear accumulation Local terms for zyg transcripts Embryonic localization patterns Pole cell exclusion post blastoderm nuclei Degraded Blastoderm nuclei Apical exclusion Accumlation in subset nuclei Accumlation entire nucleus Maternal |
| stage6-7 | 
 | post blastoderm nuclei Local terms for zyg transcripts Intranuclear accumulation Subcellular localization patterns Zygotic Nuclei-associated localization Stage 6-7 Accumlation entire nucleus vent blastoderm nuclei Localized Expressed Subset blastoderm nuclei Accumlation in subset nuclei Blastoderm nuclei |
| stage8-9 | 
 | Subcellular localization patterns Local terms for zyg transcripts Intranuclear accumulation Stage 8-9 Nuclei-associated localization Zygotic Expressed Localized Accumlation entire nucleus Segmented pattern Blastoderm nuclei Accumlation in subset nuclei Subset blastoderm nuclei |
| stage10- | 
 | Head Zygotic Brain Subcellular localization patterns Sensory sys Blastoderm nuclei Stage 10- Expressed Localized CNS vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | list_4-6:specific gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap vent nerve cord A list_7-8:specific vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||