Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | interfollicular stalk cells somatic cells post follicle cells ant follicle cells oocyte enrichment_ubiquitous |
| stage8 |  s
 s
 s
 s
 s | ant follicle cells cytoplasmic foci germline cells_ubiquitous somatic cells post follicle cells oocyte |
| stage9 |  s
 s
 s
 s
 s | follicle cells follicle cells_ubiquitous somatic cells germline cells_ubiquitous |
| stage10 |  s
 s
 s
 s
 s
 s | follicle cells germline cells_ubiquitous follicle cells_ubiquitous somatic cells |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Yolk cortex exclusion Embryonic localization patterns Exclusionary patterns Annotated by Eric Stage 1-3 Expressed Localized Medium expression (21-40ms exp) Maternal |
| stage4-5 | 
 | Localized Accumlation entire nucleus Local terms for zyg transcripts Degraded partially stage 4 Pole cell exclusion Degraded Accumlation in subset nuclei Perinuclear subset of nuclei Subcellular localization patterns Stage 4-5 post blastoderm nuclei Perinuclear localization Intranuclear accumulation Blastoderm nuclei Degradation maternal transcripts vent blastoderm nuclei Embryonic localization patterns Subset blastoderm nuclei Exclusionary patterns Zygotic Nuclei-associated localization Degraded completely stage 5 Expressed Apical exclusion Perinuclear around blastoderm nuclei Maternal |
| stage6-7 | 
 | Intranuclear accumulation Blastoderm nuclei Local terms for zyg transcripts post blastoderm nuclei Localized Accumlation entire nucleus Zygotic Nuclei-associated localization Expressed Stage 6-7 Accumlation in subset nuclei Subset blastoderm nuclei Subcellular localization patterns vent blastoderm nuclei |
| stage8-9 | 
 | Accumlation entire nucleus Segmented pattern Localized Local terms for zyg transcripts Intranuclear accumulation Blastoderm nuclei Stage 8-9 Accumlation in subset nuclei Subset blastoderm nuclei Subcellular localization patterns Nuclei-associated localization Zygotic Expressed |
| stage10- | 
 | Blastoderm nuclei Sensory sys Localized Stage 10- Zygotic Head Brain Expressed CNS Subcellular localization patterns vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | faint ubiquitous list_4-6:specific gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | list_7-8:specific vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||