Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | post follicle cells interfollicular stalk cells ant follicle cells oocyte enrichment_ubiquitous somatic cells |
| stage8 |  s
 s
 s
 s
 s | cytoplasmic foci post follicle cells germline cells_ubiquitous ant follicle cells oocyte somatic cells |
| stage9 |  s
 s
 s
 s
 s | somatic cells follicle cells germline cells_ubiquitous follicle cells_ubiquitous |
| stage10 |  s
 s
 s
 s
 s
 s | follicle cells_ubiquitous germline cells_ubiquitous follicle cells somatic cells |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Expressed Exclusionary patterns Medium expression (21-40ms exp) Annotated by Eric Yolk cortex exclusion Localized Stage 1-3 Embryonic localization patterns Maternal |
| stage4-5 | 
 | Degraded Stage 4-5 Nuclei-associated localization Subset blastoderm nuclei Degraded completely stage 5 Accumlation in subset nuclei Apical exclusion vent blastoderm nuclei Embryonic localization patterns Localized Degraded partially stage 4 Blastoderm nuclei Zygotic Exclusionary patterns Perinuclear subset of nuclei Perinuclear around blastoderm nuclei Expressed Perinuclear localization Degradation maternal transcripts Local terms for zyg transcripts Intranuclear accumulation Subcellular localization patterns post blastoderm nuclei Accumlation entire nucleus Pole cell exclusion Maternal |
| stage6-7 | 
 | Nuclei-associated localization Stage 6-7 Expressed Subset blastoderm nuclei Localized Local terms for zyg transcripts Intranuclear accumulation Subcellular localization patterns Accumlation in subset nuclei vent blastoderm nuclei Blastoderm nuclei Zygotic post blastoderm nuclei Accumlation entire nucleus |
| stage8-9 | 
 | Zygotic Blastoderm nuclei Accumlation entire nucleus Intranuclear accumulation Subcellular localization patterns Segmented pattern Local terms for zyg transcripts Localized Accumlation in subset nuclei Subset blastoderm nuclei Expressed Nuclei-associated localization Stage 8-9 |
| stage10- | 
 | Blastoderm nuclei Zygotic Localized Subcellular localization patterns Brain Sensory sys Head CNS Expressed Stage 10- vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | gap list_4-6:specific faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | list_7-8:specific vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||