Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | somatic cells ant follicle cells enrichment_ubiquitous interfollicular stalk cells oocyte post follicle cells |
| stage8 |  s
 s
 s
 s
 s | oocyte germline cells_ubiquitous post follicle cells cytoplasmic foci somatic cells ant follicle cells |
| stage9 |  s
 s
 s
 s
 s | germline cells_ubiquitous follicle cells somatic cells follicle cells_ubiquitous |
| stage10 |  s
 s
 s
 s
 s
 s | somatic cells follicle cells_ubiquitous germline cells_ubiquitous follicle cells |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Embryonic localization patterns Yolk cortex exclusion Stage 1-3 Localized Expressed Exclusionary patterns Medium expression (21-40ms exp) Annotated by Eric Maternal |
| stage4-5 | 
 | Subcellular localization patterns Embryonic localization patterns Zygotic Apical exclusion Localized Degraded Degraded partially stage 4 Stage 4-5 Subset blastoderm nuclei Expressed Accumlation entire nucleus Intranuclear accumulation post blastoderm nuclei Pole cell exclusion Degradation maternal transcripts Exclusionary patterns Perinuclear around blastoderm nuclei Nuclei-associated localization Degraded completely stage 5 vent blastoderm nuclei Blastoderm nuclei Accumlation in subset nuclei Perinuclear subset of nuclei Local terms for zyg transcripts Perinuclear localization Maternal |
| stage6-7 | 
 | Local terms for zyg transcripts Accumlation in subset nuclei Blastoderm nuclei vent blastoderm nuclei Stage 6-7 Nuclei-associated localization Localized post blastoderm nuclei Zygotic Intranuclear accumulation Accumlation entire nucleus Subcellular localization patterns Expressed Subset blastoderm nuclei |
| stage8-9 | 
 | Blastoderm nuclei Accumlation in subset nuclei Local terms for zyg transcripts Stage 8-9 Segmented pattern Nuclei-associated localization Zygotic Intranuclear accumulation Localized Subset blastoderm nuclei Expressed Subcellular localization patterns Accumlation entire nucleus |
| stage10- | 
 | Expressed Subcellular localization patterns Brain Head Stage 10- Localized CNS Zygotic Sensory sys Blastoderm nuclei vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | list_4-6:specific gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap list_7-8:specific vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||