Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | interfollicular stalk cells somatic cells ant follicle cells enrichment_ubiquitous oocyte post follicle cells |
| stage8 |  s
 s
 s
 s
 s | cytoplasmic foci somatic cells germline cells_ubiquitous ant follicle cells post follicle cells oocyte |
| stage9 |  s
 s
 s
 s
 s | somatic cells follicle cells_ubiquitous germline cells_ubiquitous follicle cells |
| stage10 |  s
 s
 s
 s
 s
 s | follicle cells_ubiquitous somatic cells follicle cells germline cells_ubiquitous |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Yolk cortex exclusion Stage 1-3 Exclusionary patterns Medium expression (21-40ms exp) Expressed Embryonic localization patterns Annotated by Eric Localized Maternal |
| stage4-5 | 
 | vent blastoderm nuclei Degraded partially stage 4 Accumlation in subset nuclei Local terms for zyg transcripts Localized Subset blastoderm nuclei Accumlation entire nucleus Perinuclear around blastoderm nuclei Stage 4-5 Degradation maternal transcripts Embryonic localization patterns Apical exclusion Pole cell exclusion Degraded Nuclei-associated localization Zygotic Intranuclear accumulation Perinuclear localization Exclusionary patterns post blastoderm nuclei Blastoderm nuclei Subcellular localization patterns Expressed Degraded completely stage 5 Perinuclear subset of nuclei Maternal |
| stage6-7 | 
 | Intranuclear accumulation Accumlation entire nucleus Zygotic Subcellular localization patterns Blastoderm nuclei Expressed Stage 6-7 post blastoderm nuclei vent blastoderm nuclei Nuclei-associated localization Subset blastoderm nuclei Localized Local terms for zyg transcripts Accumlation in subset nuclei |
| stage8-9 | 
 | Subset blastoderm nuclei Localized Nuclei-associated localization Local terms for zyg transcripts Accumlation in subset nuclei Intranuclear accumulation Zygotic Stage 8-9 Accumlation entire nucleus Segmented pattern Expressed Blastoderm nuclei Subcellular localization patterns |
| stage10- | 
 | Blastoderm nuclei Expressed Subcellular localization patterns Sensory sys Head Zygotic Localized Stage 10- CNS Brain vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | faint ubiquitous list_4-6:specific gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | list_7-8:specific vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||