Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | somatic cells oocyte enrichment_ubiquitous interfollicular stalk cells post follicle cells ant follicle cells |
| stage8 |  s
 s
 s
 s
 s | post follicle cells ant follicle cells oocyte somatic cells germline cells_ubiquitous cytoplasmic foci |
| stage9 |  s
 s
 s
 s
 s | germline cells_ubiquitous somatic cells follicle cells_ubiquitous follicle cells |
| stage10 |  s
 s
 s
 s
 s
 s | somatic cells germline cells_ubiquitous follicle cells follicle cells_ubiquitous |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Exclusionary patterns Embryonic localization patterns Medium expression (21-40ms exp) Annotated by Eric Expressed Stage 1-3 Localized Yolk cortex exclusion Maternal |
| stage4-5 | 
 | Blastoderm nuclei Perinuclear localization Exclusionary patterns Accumlation entire nucleus Degraded partially stage 4 Zygotic vent blastoderm nuclei Pole cell exclusion Local terms for zyg transcripts Degraded Expressed Degradation maternal transcripts Localized Stage 4-5 Embryonic localization patterns Accumlation in subset nuclei Subcellular localization patterns post blastoderm nuclei Perinuclear subset of nuclei Perinuclear around blastoderm nuclei Degraded completely stage 5 Nuclei-associated localization Subset blastoderm nuclei Apical exclusion Intranuclear accumulation Maternal |
| stage6-7 | 
 | Local terms for zyg transcripts Nuclei-associated localization Expressed Subset blastoderm nuclei Localized Intranuclear accumulation Stage 6-7 Blastoderm nuclei Accumlation in subset nuclei Accumlation entire nucleus post blastoderm nuclei Zygotic Subcellular localization patterns vent blastoderm nuclei |
| stage8-9 | 
 | Accumlation entire nucleus Accumlation in subset nuclei Blastoderm nuclei Stage 8-9 Segmented pattern Subcellular localization patterns Zygotic Expressed Nuclei-associated localization Local terms for zyg transcripts Localized Intranuclear accumulation Subset blastoderm nuclei |
| stage10- | 
 | CNS Stage 10- Zygotic Subcellular localization patterns Head Blastoderm nuclei Brain Localized Sensory sys Expressed vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | faint ubiquitous gap list_4-6:specific vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap list_7-8:specific vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | faint ubiquitous gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||