Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | enrichment_ubiquitous post follicle cells ant follicle cells somatic cells oocyte interfollicular stalk cells |
| stage8 |  s
 s
 s
 s
 s | post follicle cells ant follicle cells cytoplasmic foci oocyte somatic cells germline cells_ubiquitous |
| stage9 |  s
 s
 s
 s
 s | somatic cells follicle cells follicle cells_ubiquitous germline cells_ubiquitous |
| stage10 |  s
 s
 s
 s
 s
 s | somatic cells follicle cells_ubiquitous germline cells_ubiquitous follicle cells |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Stage 1-3 Annotated by Eric Yolk cortex exclusion Exclusionary patterns Localized Expressed Embryonic localization patterns Medium expression (21-40ms exp) Maternal |
| stage4-5 | 
 | Embryonic localization patterns Degraded completely stage 5 Expressed Pole cell exclusion Local terms for zyg transcripts Subcellular localization patterns Degradation maternal transcripts Blastoderm nuclei Perinuclear localization Intranuclear accumulation Accumlation entire nucleus Localized Perinuclear around blastoderm nuclei Exclusionary patterns Nuclei-associated localization Perinuclear subset of nuclei Degraded Accumlation in subset nuclei post blastoderm nuclei vent blastoderm nuclei Stage 4-5 Zygotic Degraded partially stage 4 Apical exclusion Subset blastoderm nuclei Maternal |
| stage6-7 | 
 | Nuclei-associated localization Subset blastoderm nuclei Stage 6-7 Zygotic Localized vent blastoderm nuclei Intranuclear accumulation Accumlation entire nucleus post blastoderm nuclei Blastoderm nuclei Subcellular localization patterns Local terms for zyg transcripts Accumlation in subset nuclei Expressed |
| stage8-9 | 
 | Local terms for zyg transcripts Accumlation in subset nuclei Stage 8-9 Subcellular localization patterns Blastoderm nuclei Segmented pattern Expressed Zygotic Subset blastoderm nuclei Nuclei-associated localization Intranuclear accumulation Accumlation entire nucleus Localized |
| stage10- | 
 | Zygotic Localized Head Blastoderm nuclei Subcellular localization patterns Brain CNS Expressed Stage 10- Sensory sys vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | faint ubiquitous list_4-6:specific gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A list_7-8:specific gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||