Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | enrichment_ubiquitous post follicle cells interfollicular stalk cells ant follicle cells somatic cells oocyte |
| stage8 |  s
 s
 s
 s
 s | somatic cells oocyte cytoplasmic foci germline cells_ubiquitous ant follicle cells post follicle cells |
| stage9 |  s
 s
 s
 s
 s | follicle cells germline cells_ubiquitous follicle cells_ubiquitous somatic cells |
| stage10 |  s
 s
 s
 s
 s
 s | follicle cells germline cells_ubiquitous somatic cells follicle cells_ubiquitous |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Annotated by Eric Expressed Stage 1-3 Exclusionary patterns Localized Medium expression (21-40ms exp) Embryonic localization patterns Yolk cortex exclusion Maternal |
| stage4-5 | 
 | Intranuclear accumulation Expressed Apical exclusion Pole cell exclusion Subcellular localization patterns Blastoderm nuclei Degradation maternal transcripts Embryonic localization patterns Accumlation in subset nuclei Perinuclear localization Stage 4-5 Perinuclear subset of nuclei Subset blastoderm nuclei post blastoderm nuclei Nuclei-associated localization Accumlation entire nucleus Zygotic Degraded vent blastoderm nuclei Degraded partially stage 4 Perinuclear around blastoderm nuclei Exclusionary patterns Localized Degraded completely stage 5 Local terms for zyg transcripts Maternal |
| stage6-7 | 
 | vent blastoderm nuclei Accumlation entire nucleus Subcellular localization patterns Zygotic Nuclei-associated localization Expressed Intranuclear accumulation post blastoderm nuclei Subset blastoderm nuclei Local terms for zyg transcripts Localized Stage 6-7 Accumlation in subset nuclei Blastoderm nuclei |
| stage8-9 | 
 | Expressed Subset blastoderm nuclei Intranuclear accumulation Nuclei-associated localization Accumlation entire nucleus Subcellular localization patterns Zygotic Blastoderm nuclei Accumlation in subset nuclei Segmented pattern Localized Stage 8-9 Local terms for zyg transcripts |
| stage10- | 
 | Blastoderm nuclei Head Stage 10- Brain Localized Sensory sys CNS Expressed Zygotic Subcellular localization patterns vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | gap list_4-6:specific faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A list_7-8:specific gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||