Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | oocyte ant follicle cells somatic cells enrichment_ubiquitous interfollicular stalk cells post follicle cells |
| stage8 |  s
 s
 s
 s
 s | oocyte ant follicle cells cytoplasmic foci somatic cells post follicle cells germline cells_ubiquitous |
| stage9 |  s
 s
 s
 s
 s | follicle cells_ubiquitous germline cells_ubiquitous follicle cells somatic cells |
| stage10 |  s
 s
 s
 s
 s
 s | follicle cells_ubiquitous germline cells_ubiquitous somatic cells follicle cells |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Stage 1-3 Expressed Exclusionary patterns Annotated by Eric Embryonic localization patterns Medium expression (21-40ms exp) Yolk cortex exclusion Localized Maternal |
| stage4-5 | 
 | Nuclei-associated localization vent blastoderm nuclei Apical exclusion Blastoderm nuclei Accumlation in subset nuclei Pole cell exclusion Degradation maternal transcripts Degraded Subset blastoderm nuclei Perinuclear localization post blastoderm nuclei Exclusionary patterns Intranuclear accumulation Localized Degraded partially stage 4 Zygotic Degraded completely stage 5 Embryonic localization patterns Local terms for zyg transcripts Accumlation entire nucleus Stage 4-5 Perinuclear subset of nuclei Subcellular localization patterns Expressed Perinuclear around blastoderm nuclei Maternal |
| stage6-7 | 
 | Expressed post blastoderm nuclei Intranuclear accumulation Subset blastoderm nuclei Stage 6-7 Subcellular localization patterns Blastoderm nuclei Accumlation in subset nuclei Accumlation entire nucleus Local terms for zyg transcripts Localized Nuclei-associated localization vent blastoderm nuclei Zygotic |
| stage8-9 | 
 | Segmented pattern Expressed Intranuclear accumulation Subset blastoderm nuclei Stage 8-9 Subcellular localization patterns Blastoderm nuclei Accumlation in subset nuclei Local terms for zyg transcripts Accumlation entire nucleus Nuclei-associated localization Localized Zygotic |
| stage10- | 
 | Zygotic Localized CNS Blastoderm nuclei Head Stage 10- Sensory sys Subcellular localization patterns Brain Expressed vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | list_4-6:specific gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap list_7-8:specific vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||