Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | oocyte interfollicular stalk cells ant follicle cells post follicle cells enrichment_ubiquitous somatic cells |
| stage8 |  s
 s
 s
 s
 s | cytoplasmic foci somatic cells post follicle cells ant follicle cells oocyte germline cells_ubiquitous |
| stage9 |  s
 s
 s
 s
 s | germline cells_ubiquitous follicle cells_ubiquitous somatic cells follicle cells |
| stage10 |  s
 s
 s
 s
 s
 s | follicle cells_ubiquitous germline cells_ubiquitous follicle cells somatic cells |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Annotated by Eric Embryonic localization patterns Stage 1-3 Yolk cortex exclusion Localized Medium expression (21-40ms exp) Expressed Exclusionary patterns Maternal |
| stage4-5 | 
 | Perinuclear around blastoderm nuclei Embryonic localization patterns Accumlation entire nucleus Nuclei-associated localization Degraded completely stage 5 Subcellular localization patterns Perinuclear subset of nuclei Subset blastoderm nuclei post blastoderm nuclei Degraded Stage 4-5 Zygotic Pole cell exclusion Perinuclear localization Local terms for zyg transcripts Intranuclear accumulation Degradation maternal transcripts Accumlation in subset nuclei Exclusionary patterns Apical exclusion Blastoderm nuclei vent blastoderm nuclei Expressed Degraded partially stage 4 Localized Maternal |
| stage6-7 | 
 | Zygotic Localized Blastoderm nuclei vent blastoderm nuclei Expressed Subset blastoderm nuclei Accumlation in subset nuclei post blastoderm nuclei Intranuclear accumulation Stage 6-7 Subcellular localization patterns Nuclei-associated localization Accumlation entire nucleus Local terms for zyg transcripts |
| stage8-9 | 
 | Localized Zygotic Accumlation in subset nuclei Subset blastoderm nuclei Blastoderm nuclei Stage 8-9 Expressed Subcellular localization patterns Intranuclear accumulation Segmented pattern Nuclei-associated localization Accumlation entire nucleus Local terms for zyg transcripts |
| stage10- | 
 | Subcellular localization patterns Stage 10- Head Expressed Brain Blastoderm nuclei Sensory sys CNS Zygotic Localized vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | gap list_4-6:specific faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A list_7-8:specific gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | faint ubiquitous gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||