Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | interfollicular stalk cells ant follicle cells enrichment_ubiquitous oocyte post follicle cells somatic cells |
| stage8 |  s
 s
 s
 s
 s | ant follicle cells somatic cells cytoplasmic foci germline cells_ubiquitous post follicle cells oocyte |
| stage9 |  s
 s
 s
 s
 s | follicle cells germline cells_ubiquitous somatic cells follicle cells_ubiquitous |
| stage10 |  s
 s
 s
 s
 s
 s | follicle cells follicle cells_ubiquitous germline cells_ubiquitous somatic cells |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Embryonic localization patterns Stage 1-3 Annotated by Eric Yolk cortex exclusion Expressed Exclusionary patterns Medium expression (21-40ms exp) Localized Maternal |
| stage4-5 | 
 | Accumlation in subset nuclei Perinuclear around blastoderm nuclei Perinuclear subset of nuclei Degraded Localized Apical exclusion Zygotic vent blastoderm nuclei Intranuclear accumulation Embryonic localization patterns Pole cell exclusion Blastoderm nuclei Degraded partially stage 4 Local terms for zyg transcripts Accumlation entire nucleus Degradation maternal transcripts Expressed Perinuclear localization Exclusionary patterns post blastoderm nuclei Nuclei-associated localization Degraded completely stage 5 Subset blastoderm nuclei Stage 4-5 Subcellular localization patterns Maternal |
| stage6-7 | 
 | Intranuclear accumulation Blastoderm nuclei Subset blastoderm nuclei Zygotic vent blastoderm nuclei Local terms for zyg transcripts Accumlation entire nucleus Subcellular localization patterns Expressed Accumlation in subset nuclei Stage 6-7 Nuclei-associated localization Localized post blastoderm nuclei |
| stage8-9 | 
 | Expressed Accumlation in subset nuclei Stage 8-9 Nuclei-associated localization Localized Subset blastoderm nuclei Zygotic Intranuclear accumulation Blastoderm nuclei Local terms for zyg transcripts Segmented pattern Accumlation entire nucleus Subcellular localization patterns |
| stage10- | 
 | Sensory sys Localized Brain Stage 10- Expressed Subcellular localization patterns CNS Blastoderm nuclei Head Zygotic vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | faint ubiquitous list_4-6:specific gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A list_7-8:specific gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | faint ubiquitous gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||