Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | ant follicle cells interfollicular stalk cells post follicle cells somatic cells oocyte enrichment_ubiquitous |
| stage8 |  s
 s
 s
 s
 s | ant follicle cells germline cells_ubiquitous post follicle cells cytoplasmic foci somatic cells oocyte |
| stage9 |  s
 s
 s
 s
 s | germline cells_ubiquitous follicle cells follicle cells_ubiquitous somatic cells |
| stage10 |  s
 s
 s
 s
 s
 s | follicle cells_ubiquitous somatic cells germline cells_ubiquitous follicle cells |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Embryonic localization patterns Yolk cortex exclusion Localized Expressed Exclusionary patterns Annotated by Eric Stage 1-3 Medium expression (21-40ms exp) Maternal |
| stage4-5 | 
 | post blastoderm nuclei Degraded Accumlation in subset nuclei Embryonic localization patterns Localized Perinuclear localization Perinuclear around blastoderm nuclei Exclusionary patterns Local terms for zyg transcripts Perinuclear subset of nuclei Pole cell exclusion Degradation maternal transcripts Blastoderm nuclei Accumlation entire nucleus Degraded partially stage 4 Intranuclear accumulation Zygotic Degraded completely stage 5 Stage 4-5 Apical exclusion Subset blastoderm nuclei Expressed Subcellular localization patterns vent blastoderm nuclei Nuclei-associated localization Maternal |
| stage6-7 | 
 | Subcellular localization patterns vent blastoderm nuclei Nuclei-associated localization Local terms for zyg transcripts Subset blastoderm nuclei Expressed Localized Intranuclear accumulation Zygotic Stage 6-7 post blastoderm nuclei Accumlation in subset nuclei Blastoderm nuclei Accumlation entire nucleus |
| stage8-9 | 
 | Accumlation in subset nuclei Blastoderm nuclei Accumlation entire nucleus Stage 8-9 Zygotic Intranuclear accumulation Localized Segmented pattern Subset blastoderm nuclei Local terms for zyg transcripts Expressed Nuclei-associated localization Subcellular localization patterns |
| stage10- | 
 | Expressed Stage 10- Brain Sensory sys Head Subcellular localization patterns Blastoderm nuclei CNS Zygotic Localized vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | faint ubiquitous list_4-6:specific gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | list_7-8:specific vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||