Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | ant follicle cells enrichment_ubiquitous oocyte interfollicular stalk cells somatic cells post follicle cells |
| stage8 |  s
 s
 s
 s
 s | oocyte ant follicle cells somatic cells germline cells_ubiquitous cytoplasmic foci post follicle cells |
| stage9 |  s
 s
 s
 s
 s | follicle cells germline cells_ubiquitous somatic cells follicle cells_ubiquitous |
| stage10 |  s
 s
 s
 s
 s
 s | follicle cells_ubiquitous germline cells_ubiquitous follicle cells somatic cells |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Medium expression (21-40ms exp) Stage 1-3 Exclusionary patterns Annotated by Eric Localized Embryonic localization patterns Expressed Yolk cortex exclusion Maternal |
| stage4-5 | 
 | Nuclei-associated localization Degradation maternal transcripts Degraded vent blastoderm nuclei Subset blastoderm nuclei Subcellular localization patterns Degraded partially stage 4 Blastoderm nuclei Intranuclear accumulation Pole cell exclusion Perinuclear around blastoderm nuclei Perinuclear subset of nuclei Stage 4-5 Local terms for zyg transcripts Accumlation entire nucleus Embryonic localization patterns Apical exclusion Accumlation in subset nuclei Degraded completely stage 5 Localized Zygotic Exclusionary patterns post blastoderm nuclei Perinuclear localization Expressed Maternal |
| stage6-7 | 
 | Nuclei-associated localization Zygotic Subset blastoderm nuclei vent blastoderm nuclei Subcellular localization patterns Blastoderm nuclei post blastoderm nuclei Intranuclear accumulation Stage 6-7 Local terms for zyg transcripts Accumlation entire nucleus Expressed Accumlation in subset nuclei Localized |
| stage8-9 | 
 | Nuclei-associated localization Zygotic Subset blastoderm nuclei Stage 8-9 Subcellular localization patterns Blastoderm nuclei Intranuclear accumulation Local terms for zyg transcripts Expressed Accumlation entire nucleus Accumlation in subset nuclei Segmented pattern Localized |
| stage10- | 
 | Expressed Brain Sensory sys Localized Subcellular localization patterns Zygotic Stage 10- CNS Head Blastoderm nuclei vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | faint ubiquitous list_4-6:specific gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | list_7-8:specific vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | faint ubiquitous gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||