Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | ant follicle cells interfollicular stalk cells enrichment_ubiquitous post follicle cells somatic cells oocyte |
| stage8 |  s
 s
 s
 s
 s | oocyte germline cells_ubiquitous post follicle cells somatic cells cytoplasmic foci ant follicle cells |
| stage9 |  s
 s
 s
 s
 s | follicle cells somatic cells germline cells_ubiquitous follicle cells_ubiquitous |
| stage10 |  s
 s
 s
 s
 s
 s | somatic cells germline cells_ubiquitous follicle cells_ubiquitous follicle cells |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Embryonic localization patterns Medium expression (21-40ms exp) Yolk cortex exclusion Annotated by Eric Localized Exclusionary patterns Expressed Stage 1-3 Maternal |
| stage4-5 | 
 | Accumlation in subset nuclei Perinuclear around blastoderm nuclei Degradation maternal transcripts Pole cell exclusion Stage 4-5 Embryonic localization patterns Accumlation entire nucleus post blastoderm nuclei Zygotic Blastoderm nuclei Subset blastoderm nuclei Local terms for zyg transcripts Subcellular localization patterns Degraded partially stage 4 Apical exclusion Expressed Degraded completely stage 5 Perinuclear subset of nuclei Localized Degraded Perinuclear localization Intranuclear accumulation Nuclei-associated localization vent blastoderm nuclei Exclusionary patterns Maternal |
| stage6-7 | 
 | Accumlation in subset nuclei Stage 6-7 Localized Intranuclear accumulation post blastoderm nuclei Accumlation entire nucleus Nuclei-associated localization Zygotic Blastoderm nuclei Local terms for zyg transcripts vent blastoderm nuclei Subset blastoderm nuclei Subcellular localization patterns Expressed |
| stage8-9 | 
 | Nuclei-associated localization Accumlation entire nucleus Segmented pattern Intranuclear accumulation Localized Accumlation in subset nuclei Expressed Subcellular localization patterns Stage 8-9 Local terms for zyg transcripts Subset blastoderm nuclei Blastoderm nuclei Zygotic |
| stage10- | 
 | Zygotic Blastoderm nuclei Head Subcellular localization patterns Stage 10- Sensory sys Expressed Brain Localized CNS vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | list_4-6:specific faint ubiquitous gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap list_7-8:specific vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | faint ubiquitous gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||