Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | enrichment_ubiquitous somatic cells ant follicle cells post follicle cells oocyte interfollicular stalk cells |
| stage8 |  s
 s
 s
 s
 s | germline cells_ubiquitous oocyte cytoplasmic foci post follicle cells ant follicle cells somatic cells |
| stage9 |  s
 s
 s
 s
 s | somatic cells germline cells_ubiquitous follicle cells_ubiquitous follicle cells |
| stage10 |  s
 s
 s
 s
 s
 s | somatic cells germline cells_ubiquitous follicle cells_ubiquitous follicle cells |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Medium expression (21-40ms exp) Exclusionary patterns Annotated by Eric Localized Embryonic localization patterns Yolk cortex exclusion Expressed Stage 1-3 Maternal |
| stage4-5 | 
 | Apical exclusion Perinuclear subset of nuclei post blastoderm nuclei Intranuclear accumulation Perinuclear localization Zygotic Subcellular localization patterns Subset blastoderm nuclei Local terms for zyg transcripts Localized Degradation maternal transcripts Perinuclear around blastoderm nuclei Embryonic localization patterns vent blastoderm nuclei Stage 4-5 Accumlation in subset nuclei Degraded Degraded partially stage 4 Expressed Nuclei-associated localization Degraded completely stage 5 Exclusionary patterns Pole cell exclusion Accumlation entire nucleus Blastoderm nuclei Maternal |
| stage6-7 | 
 | Accumlation entire nucleus Localized Stage 6-7 Local terms for zyg transcripts Blastoderm nuclei vent blastoderm nuclei Intranuclear accumulation Accumlation in subset nuclei post blastoderm nuclei Subcellular localization patterns Subset blastoderm nuclei Zygotic Expressed Nuclei-associated localization |
| stage8-9 | 
 | Blastoderm nuclei Local terms for zyg transcripts Accumlation entire nucleus Localized Nuclei-associated localization Expressed Subset blastoderm nuclei Subcellular localization patterns Zygotic Segmented pattern Stage 8-9 Accumlation in subset nuclei Intranuclear accumulation |
| stage10- | 
 | Subcellular localization patterns Zygotic Stage 10- Expressed CNS Blastoderm nuclei Head Brain Localized Sensory sys vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | gap list_4-6:specific faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap list_7-8:specific vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | faint ubiquitous gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||