Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | somatic cells interfollicular stalk cells enrichment_ubiquitous post follicle cells oocyte ant follicle cells |
| stage8 |  s
 s
 s
 s
 s | cytoplasmic foci oocyte ant follicle cells germline cells_ubiquitous somatic cells post follicle cells |
| stage9 |  s
 s
 s
 s
 s | follicle cells follicle cells_ubiquitous germline cells_ubiquitous somatic cells |
| stage10 |  s
 s
 s
 s
 s
 s | follicle cells follicle cells_ubiquitous germline cells_ubiquitous somatic cells |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Embryonic localization patterns Annotated by Eric Medium expression (21-40ms exp) Exclusionary patterns Localized Stage 1-3 Expressed Yolk cortex exclusion Maternal |
| stage4-5 | 
 | Stage 4-5 Pole cell exclusion Local terms for zyg transcripts Expressed Degraded partially stage 4 Perinuclear localization Intranuclear accumulation post blastoderm nuclei Exclusionary patterns Degraded Perinuclear around blastoderm nuclei Localized Subcellular localization patterns Degradation maternal transcripts Embryonic localization patterns Subset blastoderm nuclei Degraded completely stage 5 Zygotic Apical exclusion Nuclei-associated localization Accumlation entire nucleus Blastoderm nuclei Accumlation in subset nuclei vent blastoderm nuclei Perinuclear subset of nuclei Maternal |
| stage6-7 | 
 | vent blastoderm nuclei Accumlation in subset nuclei Blastoderm nuclei post blastoderm nuclei Nuclei-associated localization Accumlation entire nucleus Localized Subcellular localization patterns Subset blastoderm nuclei Stage 6-7 Local terms for zyg transcripts Expressed Zygotic Intranuclear accumulation |
| stage8-9 | 
 | Segmented pattern Accumlation in subset nuclei Blastoderm nuclei Localized Accumlation entire nucleus Subcellular localization patterns Nuclei-associated localization Zygotic Intranuclear accumulation Expressed Local terms for zyg transcripts Stage 8-9 Subset blastoderm nuclei |
| stage10- | 
 | Sensory sys Zygotic Head Expressed CNS Subcellular localization patterns Localized Blastoderm nuclei Brain Stage 10- vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | faint ubiquitous gap list_4-6:specific vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A list_7-8:specific gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||