Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | interfollicular stalk cells ant follicle cells enrichment_ubiquitous somatic cells oocyte post follicle cells |
| stage8 |  s
 s
 s
 s
 s | oocyte somatic cells post follicle cells cytoplasmic foci germline cells_ubiquitous ant follicle cells |
| stage9 |  s
 s
 s
 s
 s | germline cells_ubiquitous follicle cells somatic cells follicle cells_ubiquitous |
| stage10 |  s
 s
 s
 s
 s
 s | follicle cells germline cells_ubiquitous follicle cells_ubiquitous somatic cells |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Embryonic localization patterns Medium expression (21-40ms exp) Annotated by Eric Localized Yolk cortex exclusion Exclusionary patterns Stage 1-3 Expressed Maternal |
| stage4-5 | 
 | Pole cell exclusion Perinuclear subset of nuclei post blastoderm nuclei vent blastoderm nuclei Perinuclear around blastoderm nuclei Exclusionary patterns Subcellular localization patterns Degraded Subset blastoderm nuclei Degraded completely stage 5 Expressed Stage 4-5 Local terms for zyg transcripts Blastoderm nuclei Embryonic localization patterns Accumlation in subset nuclei Accumlation entire nucleus Zygotic Perinuclear localization Apical exclusion Intranuclear accumulation Degradation maternal transcripts Localized Degraded partially stage 4 Nuclei-associated localization Maternal |
| stage6-7 | 
 | Subset blastoderm nuclei Stage 6-7 Zygotic Subcellular localization patterns Expressed Intranuclear accumulation Localized Local terms for zyg transcripts Nuclei-associated localization post blastoderm nuclei vent blastoderm nuclei Accumlation in subset nuclei Accumlation entire nucleus Blastoderm nuclei |
| stage8-9 | 
 | Accumlation entire nucleus Accumlation in subset nuclei Blastoderm nuclei Stage 8-9 Intranuclear accumulation Expressed Subset blastoderm nuclei Segmented pattern Zygotic Subcellular localization patterns Nuclei-associated localization Localized Local terms for zyg transcripts |
| stage10- | 
 | Brain Blastoderm nuclei Sensory sys Stage 10- Localized Head CNS Subcellular localization patterns Zygotic Expressed vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | faint ubiquitous list_4-6:specific gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap list_7-8:specific vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||