Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | post follicle cells oocyte enrichment_ubiquitous somatic cells interfollicular stalk cells ant follicle cells |
| stage8 |  s
 s
 s
 s
 s | somatic cells germline cells_ubiquitous ant follicle cells post follicle cells oocyte cytoplasmic foci |
| stage9 |  s
 s
 s
 s
 s | follicle cells_ubiquitous germline cells_ubiquitous follicle cells somatic cells |
| stage10 |  s
 s
 s
 s
 s
 s | germline cells_ubiquitous somatic cells follicle cells follicle cells_ubiquitous |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Localized Exclusionary patterns Annotated by Eric Yolk cortex exclusion Medium expression (21-40ms exp) Embryonic localization patterns Expressed Stage 1-3 Maternal |
| stage4-5 | 
 | Apical exclusion Embryonic localization patterns Degraded vent blastoderm nuclei Perinuclear subset of nuclei Degradation maternal transcripts Perinuclear localization Accumlation in subset nuclei Blastoderm nuclei Intranuclear accumulation Pole cell exclusion Expressed post blastoderm nuclei Degraded partially stage 4 Perinuclear around blastoderm nuclei Subcellular localization patterns Localized Accumlation entire nucleus Nuclei-associated localization Stage 4-5 Degraded completely stage 5 Zygotic Local terms for zyg transcripts Exclusionary patterns Subset blastoderm nuclei Maternal |
| stage6-7 | 
 | Subset blastoderm nuclei Zygotic Local terms for zyg transcripts Stage 6-7 Nuclei-associated localization vent blastoderm nuclei Accumlation entire nucleus Localized Subcellular localization patterns Expressed post blastoderm nuclei Blastoderm nuclei Intranuclear accumulation Accumlation in subset nuclei |
| stage8-9 | 
 | Local terms for zyg transcripts Zygotic Subset blastoderm nuclei Segmented pattern Localized Accumlation entire nucleus Nuclei-associated localization Expressed Subcellular localization patterns Accumlation in subset nuclei Stage 8-9 Intranuclear accumulation Blastoderm nuclei |
| stage10- | 
 | Zygotic Localized CNS Expressed Sensory sys Stage 10- Subcellular localization patterns Brain Blastoderm nuclei Head vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | list_4-6:specific gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | list_7-8:specific vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||