Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | ant follicle cells oocyte interfollicular stalk cells enrichment_ubiquitous somatic cells post follicle cells |
| stage8 |  s
 s
 s
 s
 s | germline cells_ubiquitous post follicle cells somatic cells cytoplasmic foci ant follicle cells oocyte |
| stage9 |  s
 s
 s
 s
 s | germline cells_ubiquitous follicle cells_ubiquitous follicle cells somatic cells |
| stage10 |  s
 s
 s
 s
 s
 s | somatic cells follicle cells germline cells_ubiquitous follicle cells_ubiquitous |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Annotated by Eric Stage 1-3 Localized Embryonic localization patterns Expressed Medium expression (21-40ms exp) Exclusionary patterns Yolk cortex exclusion Maternal |
| stage4-5 | 
 | Zygotic Pole cell exclusion Subset blastoderm nuclei Perinuclear localization Exclusionary patterns Degraded partially stage 4 Degraded completely stage 5 Accumlation in subset nuclei Perinuclear subset of nuclei Localized Embryonic localization patterns Blastoderm nuclei Degradation maternal transcripts Stage 4-5 Nuclei-associated localization Expressed post blastoderm nuclei Local terms for zyg transcripts Intranuclear accumulation Apical exclusion Perinuclear around blastoderm nuclei vent blastoderm nuclei Degraded Subcellular localization patterns Accumlation entire nucleus Maternal |
| stage6-7 | 
 | Accumlation in subset nuclei Localized vent blastoderm nuclei Accumlation entire nucleus Subcellular localization patterns Blastoderm nuclei Zygotic Stage 6-7 Expressed Subset blastoderm nuclei Nuclei-associated localization Intranuclear accumulation post blastoderm nuclei Local terms for zyg transcripts |
| stage8-9 | 
 | Localized Blastoderm nuclei Subcellular localization patterns Accumlation entire nucleus Accumlation in subset nuclei Local terms for zyg transcripts Segmented pattern Intranuclear accumulation Stage 8-9 Zygotic Subset blastoderm nuclei Nuclei-associated localization Expressed |
| stage10- | 
 | Brain Stage 10- Expressed Head CNS Zygotic Subcellular localization patterns Blastoderm nuclei Localized Sensory sys vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | gap faint ubiquitous list_4-6:specific vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A list_7-8:specific gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | faint ubiquitous gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||