Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | somatic cells enrichment_ubiquitous oocyte ant follicle cells post follicle cells interfollicular stalk cells |
| stage8 |  s
 s
 s
 s
 s | oocyte germline cells_ubiquitous somatic cells cytoplasmic foci post follicle cells ant follicle cells |
| stage9 |  s
 s
 s
 s
 s | germline cells_ubiquitous follicle cells follicle cells_ubiquitous somatic cells |
| stage10 |  s
 s
 s
 s
 s
 s | follicle cells_ubiquitous somatic cells germline cells_ubiquitous follicle cells |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Expressed Annotated by Eric Medium expression (21-40ms exp) Exclusionary patterns Embryonic localization patterns Localized Yolk cortex exclusion Stage 1-3 Maternal |
| stage4-5 | 
 | Apical exclusion Blastoderm nuclei Perinuclear around blastoderm nuclei Intranuclear accumulation Subcellular localization patterns Accumlation in subset nuclei Pole cell exclusion Nuclei-associated localization Exclusionary patterns Local terms for zyg transcripts Subset blastoderm nuclei Perinuclear localization Degraded post blastoderm nuclei vent blastoderm nuclei Accumlation entire nucleus Localized Embryonic localization patterns Perinuclear subset of nuclei Degraded completely stage 5 Degradation maternal transcripts Degraded partially stage 4 Stage 4-5 Expressed Zygotic Maternal |
| stage6-7 | 
 | post blastoderm nuclei Accumlation entire nucleus Localized Subcellular localization patterns Intranuclear accumulation vent blastoderm nuclei Blastoderm nuclei Nuclei-associated localization Local terms for zyg transcripts Accumlation in subset nuclei Expressed Zygotic Stage 6-7 Subset blastoderm nuclei |
| stage8-9 | 
 | Stage 8-9 Accumlation entire nucleus Localized Intranuclear accumulation Subcellular localization patterns Blastoderm nuclei Segmented pattern Expressed Zygotic Subset blastoderm nuclei Nuclei-associated localization Local terms for zyg transcripts Accumlation in subset nuclei |
| stage10- | 
 | Zygotic Expressed CNS Blastoderm nuclei Sensory sys Localized Subcellular localization patterns Head Stage 10- Brain vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | faint ubiquitous gap list_4-6:specific vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap vent nerve cord A list_7-8:specific vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||