Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | oocyte enrichment_ubiquitous somatic cells ant follicle cells interfollicular stalk cells post follicle cells |
| stage8 |  s
 s
 s
 s
 s | germline cells_ubiquitous cytoplasmic foci post follicle cells ant follicle cells oocyte somatic cells |
| stage9 |  s
 s
 s
 s
 s | somatic cells follicle cells_ubiquitous follicle cells germline cells_ubiquitous |
| stage10 |  s
 s
 s
 s
 s
 s | somatic cells follicle cells_ubiquitous germline cells_ubiquitous follicle cells |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Medium expression (21-40ms exp) Stage 1-3 Exclusionary patterns Expressed Embryonic localization patterns Annotated by Eric Localized Yolk cortex exclusion Maternal |
| stage4-5 | 
 | post blastoderm nuclei Degradation maternal transcripts Nuclei-associated localization Subcellular localization patterns Local terms for zyg transcripts Accumlation entire nucleus Perinuclear subset of nuclei Perinuclear around blastoderm nuclei Apical exclusion Exclusionary patterns Pole cell exclusion Perinuclear localization Degraded partially stage 4 Blastoderm nuclei Expressed Degraded completely stage 5 Embryonic localization patterns Localized Subset blastoderm nuclei Zygotic Stage 4-5 Intranuclear accumulation Degraded Accumlation in subset nuclei vent blastoderm nuclei Maternal |
| stage6-7 | 
 | Localized Expressed vent blastoderm nuclei Blastoderm nuclei Accumlation in subset nuclei Intranuclear accumulation Accumlation entire nucleus Local terms for zyg transcripts Subcellular localization patterns Nuclei-associated localization Zygotic Stage 6-7 post blastoderm nuclei Subset blastoderm nuclei |
| stage8-9 | 
 | Expressed Localized Segmented pattern Stage 8-9 Blastoderm nuclei Accumlation in subset nuclei Intranuclear accumulation Subcellular localization patterns Local terms for zyg transcripts Accumlation entire nucleus Zygotic Nuclei-associated localization Subset blastoderm nuclei |
| stage10- | 
 | Stage 10- Head CNS Brain Sensory sys Zygotic Subcellular localization patterns Blastoderm nuclei Localized Expressed vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | list_4-6:specific faint ubiquitous gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A list_7-8:specific gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | faint ubiquitous gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||