Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | enrichment_ubiquitous somatic cells interfollicular stalk cells oocyte ant follicle cells post follicle cells |
| stage8 |  s
 s
 s
 s
 s | somatic cells oocyte ant follicle cells cytoplasmic foci germline cells_ubiquitous post follicle cells |
| stage9 |  s
 s
 s
 s
 s | germline cells_ubiquitous follicle cells_ubiquitous somatic cells follicle cells |
| stage10 |  s
 s
 s
 s
 s
 s | somatic cells follicle cells follicle cells_ubiquitous germline cells_ubiquitous |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Exclusionary patterns Expressed Annotated by Eric Localized Stage 1-3 Yolk cortex exclusion Medium expression (21-40ms exp) Embryonic localization patterns Maternal |
| stage4-5 | 
 | Degraded completely stage 5 Intranuclear accumulation Nuclei-associated localization vent blastoderm nuclei Subset blastoderm nuclei Localized Accumlation entire nucleus Pole cell exclusion Zygotic Embryonic localization patterns Local terms for zyg transcripts Perinuclear localization Accumlation in subset nuclei Subcellular localization patterns Degraded partially stage 4 Blastoderm nuclei Exclusionary patterns Degradation maternal transcripts Expressed Degraded Apical exclusion Perinuclear subset of nuclei post blastoderm nuclei Stage 4-5 Perinuclear around blastoderm nuclei Maternal |
| stage6-7 | 
 | Subset blastoderm nuclei vent blastoderm nuclei Expressed Blastoderm nuclei Localized post blastoderm nuclei Zygotic Stage 6-7 Accumlation entire nucleus Subcellular localization patterns Nuclei-associated localization Intranuclear accumulation Local terms for zyg transcripts Accumlation in subset nuclei |
| stage8-9 | 
 | Subset blastoderm nuclei Expressed Blastoderm nuclei Localized Stage 8-9 Zygotic Accumlation entire nucleus Segmented pattern Subcellular localization patterns Nuclei-associated localization Local terms for zyg transcripts Accumlation in subset nuclei Intranuclear accumulation |
| stage10- | 
 | Zygotic Brain Sensory sys Stage 10- Subcellular localization patterns Blastoderm nuclei Expressed CNS Head Localized vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | faint ubiquitous list_4-6:specific gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap vent nerve cord A list_7-8:specific vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | faint ubiquitous gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||