Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | enrichment_ubiquitous somatic cells post follicle cells interfollicular stalk cells oocyte ant follicle cells |
| stage8 |  s
 s
 s
 s
 s | cytoplasmic foci germline cells_ubiquitous somatic cells post follicle cells oocyte ant follicle cells |
| stage9 |  s
 s
 s
 s
 s | follicle cells somatic cells germline cells_ubiquitous follicle cells_ubiquitous |
| stage10 |  s
 s
 s
 s
 s
 s | follicle cells_ubiquitous follicle cells somatic cells germline cells_ubiquitous |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Stage 1-3 Annotated by Eric Localized Exclusionary patterns Embryonic localization patterns Expressed Yolk cortex exclusion Medium expression (21-40ms exp) Maternal |
| stage4-5 | 
 | Subcellular localization patterns Apical exclusion Localized Accumlation entire nucleus Degraded Local terms for zyg transcripts Zygotic post blastoderm nuclei Blastoderm nuclei Expressed Perinuclear localization Intranuclear accumulation Accumlation in subset nuclei Stage 4-5 Degraded completely stage 5 vent blastoderm nuclei Perinuclear around blastoderm nuclei Perinuclear subset of nuclei Degradation maternal transcripts Nuclei-associated localization Pole cell exclusion Exclusionary patterns Degraded partially stage 4 Embryonic localization patterns Subset blastoderm nuclei Maternal |
| stage6-7 | 
 | vent blastoderm nuclei Local terms for zyg transcripts Localized Accumlation entire nucleus Accumlation in subset nuclei Stage 6-7 Subcellular localization patterns Intranuclear accumulation Subset blastoderm nuclei Nuclei-associated localization Blastoderm nuclei Expressed post blastoderm nuclei Zygotic |
| stage8-9 | 
 | Segmented pattern Local terms for zyg transcripts Intranuclear accumulation Stage 8-9 Localized Accumlation entire nucleus Subcellular localization patterns Accumlation in subset nuclei Subset blastoderm nuclei Nuclei-associated localization Zygotic Blastoderm nuclei Expressed |
| stage10- | 
 | Head Localized Subcellular localization patterns Sensory sys CNS Brain Stage 10- Zygotic Expressed Blastoderm nuclei vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | faint ubiquitous gap list_4-6:specific vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | list_7-8:specific vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||