Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | enrichment_ubiquitous ant follicle cells oocyte interfollicular stalk cells post follicle cells somatic cells |
| stage8 |  s
 s
 s
 s
 s | germline cells_ubiquitous ant follicle cells oocyte cytoplasmic foci somatic cells post follicle cells |
| stage9 |  s
 s
 s
 s
 s | follicle cells_ubiquitous follicle cells germline cells_ubiquitous somatic cells |
| stage10 |  s
 s
 s
 s
 s
 s | somatic cells follicle cells_ubiquitous follicle cells germline cells_ubiquitous |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Yolk cortex exclusion Expressed Stage 1-3 Localized Exclusionary patterns Embryonic localization patterns Annotated by Eric Medium expression (21-40ms exp) Maternal |
| stage4-5 | 
 | Subcellular localization patterns Degradation maternal transcripts Zygotic Degraded Apical exclusion Intranuclear accumulation Perinuclear localization Nuclei-associated localization Pole cell exclusion Localized Degraded completely stage 5 Perinuclear around blastoderm nuclei Local terms for zyg transcripts post blastoderm nuclei Embryonic localization patterns Stage 4-5 Accumlation in subset nuclei Perinuclear subset of nuclei Expressed Accumlation entire nucleus Subset blastoderm nuclei Exclusionary patterns Degraded partially stage 4 Blastoderm nuclei vent blastoderm nuclei Maternal |
| stage6-7 | 
 | Local terms for zyg transcripts post blastoderm nuclei Stage 6-7 Zygotic Accumlation in subset nuclei Subcellular localization patterns Intranuclear accumulation Expressed Nuclei-associated localization Localized Accumlation entire nucleus Subset blastoderm nuclei Blastoderm nuclei vent blastoderm nuclei |
| stage8-9 | 
 | Local terms for zyg transcripts Stage 8-9 Subcellular localization patterns Accumlation in subset nuclei Zygotic Intranuclear accumulation Segmented pattern Expressed Nuclei-associated localization Accumlation entire nucleus Localized Subset blastoderm nuclei Blastoderm nuclei |
| stage10- | 
 | Brain Sensory sys Zygotic Subcellular localization patterns Head Stage 10- Expressed Blastoderm nuclei Localized CNS vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | list_4-6:specific faint ubiquitous gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap list_7-8:specific vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | faint ubiquitous gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||