Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | enrichment_ubiquitous somatic cells post follicle cells oocyte ant follicle cells interfollicular stalk cells |
| stage8 |  s
 s
 s
 s
 s | post follicle cells germline cells_ubiquitous oocyte cytoplasmic foci somatic cells ant follicle cells |
| stage9 |  s
 s
 s
 s
 s | follicle cells germline cells_ubiquitous somatic cells follicle cells_ubiquitous |
| stage10 |  s
 s
 s
 s
 s
 s | somatic cells follicle cells germline cells_ubiquitous follicle cells_ubiquitous |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Expressed Annotated by Eric Yolk cortex exclusion Exclusionary patterns Embryonic localization patterns Stage 1-3 Medium expression (21-40ms exp) Localized Maternal |
| stage4-5 | 
 | Blastoderm nuclei Pole cell exclusion Perinuclear localization Perinuclear subset of nuclei vent blastoderm nuclei Perinuclear around blastoderm nuclei Apical exclusion Embryonic localization patterns Exclusionary patterns Accumlation in subset nuclei Subset blastoderm nuclei Intranuclear accumulation post blastoderm nuclei Subcellular localization patterns Localized Degraded completely stage 5 Degraded Degradation maternal transcripts Local terms for zyg transcripts Accumlation entire nucleus Stage 4-5 Nuclei-associated localization Degraded partially stage 4 Zygotic Expressed Maternal |
| stage6-7 | 
 | Stage 6-7 Local terms for zyg transcripts vent blastoderm nuclei Accumlation entire nucleus Localized post blastoderm nuclei Subcellular localization patterns Blastoderm nuclei Subset blastoderm nuclei Intranuclear accumulation Expressed Zygotic Nuclei-associated localization Accumlation in subset nuclei |
| stage8-9 | 
 | Segmented pattern Accumlation in subset nuclei Intranuclear accumulation Subset blastoderm nuclei Stage 8-9 Expressed Zygotic Nuclei-associated localization Localized Subcellular localization patterns Blastoderm nuclei Local terms for zyg transcripts Accumlation entire nucleus |
| stage10- | 
 | Subcellular localization patterns Localized Blastoderm nuclei Sensory sys CNS Head Brain Stage 10- Zygotic Expressed vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | faint ubiquitous gap list_4-6:specific vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | list_7-8:specific vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||