Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | interfollicular stalk cells enrichment_ubiquitous oocyte post follicle cells somatic cells ant follicle cells |
| stage8 |  s
 s
 s
 s
 s | post follicle cells cytoplasmic foci somatic cells germline cells_ubiquitous ant follicle cells oocyte |
| stage9 |  s
 s
 s
 s
 s | follicle cells somatic cells germline cells_ubiquitous follicle cells_ubiquitous |
| stage10 |  s
 s
 s
 s
 s
 s | follicle cells follicle cells_ubiquitous germline cells_ubiquitous somatic cells |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Yolk cortex exclusion Localized Expressed Stage 1-3 Embryonic localization patterns Exclusionary patterns Annotated by Eric Medium expression (21-40ms exp) Maternal |
| stage4-5 | 
 | Degraded partially stage 4 Nuclei-associated localization Exclusionary patterns Degraded Degraded completely stage 5 Pole cell exclusion Accumlation in subset nuclei Zygotic vent blastoderm nuclei Perinuclear localization Localized Subcellular localization patterns Apical exclusion Subset blastoderm nuclei Stage 4-5 Perinuclear subset of nuclei Intranuclear accumulation Degradation maternal transcripts Embryonic localization patterns Local terms for zyg transcripts Accumlation entire nucleus post blastoderm nuclei Blastoderm nuclei Perinuclear around blastoderm nuclei Expressed Maternal |
| stage6-7 | 
 | Subcellular localization patterns Subset blastoderm nuclei Intranuclear accumulation Nuclei-associated localization vent blastoderm nuclei Accumlation entire nucleus Localized Local terms for zyg transcripts Zygotic Accumlation in subset nuclei Blastoderm nuclei Expressed Stage 6-7 post blastoderm nuclei |
| stage8-9 | 
 | Nuclei-associated localization Intranuclear accumulation Segmented pattern Subset blastoderm nuclei Subcellular localization patterns Stage 8-9 Expressed Blastoderm nuclei Localized Accumlation entire nucleus Zygotic Accumlation in subset nuclei Local terms for zyg transcripts |
| stage10- | 
 | Subcellular localization patterns Stage 10- Localized Zygotic CNS Brain Expressed Blastoderm nuclei Sensory sys Head vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | faint ubiquitous gap list_4-6:specific vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | list_7-8:specific vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | faint ubiquitous gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||