Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | oocyte post follicle cells interfollicular stalk cells enrichment_ubiquitous ant follicle cells somatic cells |
| stage8 |  s
 s
 s
 s
 s | post follicle cells oocyte cytoplasmic foci somatic cells germline cells_ubiquitous ant follicle cells |
| stage9 |  s
 s
 s
 s
 s | follicle cells somatic cells germline cells_ubiquitous follicle cells_ubiquitous |
| stage10 |  s
 s
 s
 s
 s
 s | somatic cells follicle cells_ubiquitous germline cells_ubiquitous follicle cells |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Localized Exclusionary patterns Yolk cortex exclusion Medium expression (21-40ms exp) Embryonic localization patterns Stage 1-3 Expressed Annotated by Eric Maternal |
| stage4-5 | 
 | Degradation maternal transcripts Zygotic Embryonic localization patterns Accumlation entire nucleus Expressed Subset blastoderm nuclei Degraded completely stage 5 Degraded vent blastoderm nuclei Apical exclusion Localized Pole cell exclusion Perinuclear around blastoderm nuclei Perinuclear subset of nuclei Perinuclear localization Exclusionary patterns Blastoderm nuclei Stage 4-5 Nuclei-associated localization Degraded partially stage 4 Local terms for zyg transcripts post blastoderm nuclei Accumlation in subset nuclei Subcellular localization patterns Intranuclear accumulation Maternal |
| stage6-7 | 
 | vent blastoderm nuclei Nuclei-associated localization Local terms for zyg transcripts post blastoderm nuclei Accumlation in subset nuclei Localized Intranuclear accumulation Subcellular localization patterns Stage 6-7 Blastoderm nuclei Zygotic Expressed Subset blastoderm nuclei Accumlation entire nucleus |
| stage8-9 | 
 | Intranuclear accumulation Subcellular localization patterns Accumlation in subset nuclei Localized Local terms for zyg transcripts Nuclei-associated localization Segmented pattern Expressed Subset blastoderm nuclei Accumlation entire nucleus Zygotic Blastoderm nuclei Stage 8-9 |
| stage10- | 
 | Subcellular localization patterns Brain Localized Head Sensory sys Expressed Zygotic Blastoderm nuclei Stage 10- CNS vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | faint ubiquitous list_4-6:specific gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A list_7-8:specific gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||