Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | post follicle cells ant follicle cells oocyte enrichment_ubiquitous somatic cells interfollicular stalk cells |
| stage8 |  s
 s
 s
 s
 s | cytoplasmic foci somatic cells germline cells_ubiquitous post follicle cells oocyte ant follicle cells |
| stage9 |  s
 s
 s
 s
 s | follicle cells_ubiquitous somatic cells germline cells_ubiquitous follicle cells |
| stage10 |  s
 s
 s
 s
 s
 s | somatic cells follicle cells_ubiquitous germline cells_ubiquitous follicle cells |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Stage 1-3 Embryonic localization patterns Medium expression (21-40ms exp) Exclusionary patterns Expressed Localized Annotated by Eric Yolk cortex exclusion Maternal |
| stage4-5 | 
 | Apical exclusion vent blastoderm nuclei Perinuclear localization Blastoderm nuclei Degraded Exclusionary patterns Accumlation entire nucleus Degradation maternal transcripts Nuclei-associated localization Perinuclear subset of nuclei Degraded partially stage 4 Perinuclear around blastoderm nuclei Subset blastoderm nuclei Subcellular localization patterns post blastoderm nuclei Zygotic Local terms for zyg transcripts Localized Stage 4-5 Expressed Degraded completely stage 5 Pole cell exclusion Intranuclear accumulation Embryonic localization patterns Accumlation in subset nuclei Maternal |
| stage6-7 | 
 | Subcellular localization patterns post blastoderm nuclei Zygotic Local terms for zyg transcripts Stage 6-7 Localized Expressed vent blastoderm nuclei Blastoderm nuclei Accumlation entire nucleus Nuclei-associated localization Intranuclear accumulation Subset blastoderm nuclei Accumlation in subset nuclei |
| stage8-9 | 
 | Local terms for zyg transcripts Localized Subcellular localization patterns Zygotic Blastoderm nuclei Expressed Intranuclear accumulation Stage 8-9 Accumlation entire nucleus Nuclei-associated localization Subset blastoderm nuclei Accumlation in subset nuclei Segmented pattern |
| stage10- | 
 | Sensory sys CNS Head Brain Expressed Blastoderm nuclei Stage 10- Zygotic Subcellular localization patterns Localized vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | faint ubiquitous gap list_4-6:specific vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A list_7-8:specific gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | faint ubiquitous gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||