Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | oocyte ant follicle cells somatic cells enrichment_ubiquitous interfollicular stalk cells post follicle cells |
| stage8 |  s
 s
 s
 s
 s | post follicle cells germline cells_ubiquitous cytoplasmic foci somatic cells ant follicle cells oocyte |
| stage9 |  s
 s
 s
 s
 s | germline cells_ubiquitous somatic cells follicle cells follicle cells_ubiquitous |
| stage10 |  s
 s
 s
 s
 s
 s | follicle cells_ubiquitous germline cells_ubiquitous somatic cells follicle cells |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Stage 1-3 Expressed Medium expression (21-40ms exp) Embryonic localization patterns Exclusionary patterns Annotated by Eric Localized Yolk cortex exclusion Maternal |
| stage4-5 | 
 | Blastoderm nuclei Accumlation entire nucleus Degraded Embryonic localization patterns Intranuclear accumulation Apical exclusion Degraded completely stage 5 Nuclei-associated localization Pole cell exclusion Accumlation in subset nuclei Degraded partially stage 4 Expressed Perinuclear localization Perinuclear around blastoderm nuclei Zygotic vent blastoderm nuclei Exclusionary patterns Degradation maternal transcripts Perinuclear subset of nuclei Stage 4-5 Subcellular localization patterns post blastoderm nuclei Subset blastoderm nuclei Localized Local terms for zyg transcripts Maternal |
| stage6-7 | 
 | post blastoderm nuclei Nuclei-associated localization Subcellular localization patterns Intranuclear accumulation Local terms for zyg transcripts Accumlation in subset nuclei Localized Subset blastoderm nuclei Stage 6-7 Accumlation entire nucleus Blastoderm nuclei Expressed Zygotic vent blastoderm nuclei |
| stage8-9 | 
 | Local terms for zyg transcripts Accumlation in subset nuclei Subset blastoderm nuclei Localized Segmented pattern Subcellular localization patterns Nuclei-associated localization Intranuclear accumulation Zygotic Stage 8-9 Accumlation entire nucleus Blastoderm nuclei Expressed |
| stage10- | 
 | Brain CNS Zygotic Blastoderm nuclei Expressed Stage 10- Localized Sensory sys Subcellular localization patterns Head vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | list_4-6:specific gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | list_7-8:specific gap vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||