Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | enrichment_ubiquitous ant follicle cells oocyte somatic cells interfollicular stalk cells post follicle cells |
| stage8 |  s
 s
 s
 s
 s | germline cells_ubiquitous ant follicle cells oocyte somatic cells cytoplasmic foci post follicle cells |
| stage9 |  s
 s
 s
 s
 s | follicle cells somatic cells follicle cells_ubiquitous germline cells_ubiquitous |
| stage10 |  s
 s
 s
 s
 s
 s | germline cells_ubiquitous follicle cells_ubiquitous somatic cells follicle cells |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Stage 1-3 Expressed Medium expression (21-40ms exp) Embryonic localization patterns Annotated by Eric Yolk cortex exclusion Exclusionary patterns Localized Maternal |
| stage4-5 | 
 | Local terms for zyg transcripts Degradation maternal transcripts Embryonic localization patterns Apical exclusion Subcellular localization patterns Blastoderm nuclei post blastoderm nuclei Perinuclear subset of nuclei Pole cell exclusion Intranuclear accumulation vent blastoderm nuclei Accumlation in subset nuclei Accumlation entire nucleus Perinuclear around blastoderm nuclei Stage 4-5 Nuclei-associated localization Perinuclear localization Exclusionary patterns Localized Subset blastoderm nuclei Expressed Zygotic Degraded partially stage 4 Degraded Degraded completely stage 5 Maternal |
| stage6-7 | 
 | Subcellular localization patterns Nuclei-associated localization Local terms for zyg transcripts Localized post blastoderm nuclei Blastoderm nuclei Zygotic Accumlation in subset nuclei Intranuclear accumulation vent blastoderm nuclei Expressed Subset blastoderm nuclei Stage 6-7 Accumlation entire nucleus |
| stage8-9 | 
 | Local terms for zyg transcripts Stage 8-9 Nuclei-associated localization Subcellular localization patterns Blastoderm nuclei Localized Segmented pattern Subset blastoderm nuclei Intranuclear accumulation Expressed Accumlation in subset nuclei Zygotic Accumlation entire nucleus |
| stage10- | 
 | Sensory sys CNS Brain Zygotic Expressed Localized Blastoderm nuclei Subcellular localization patterns Stage 10- Head vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | list_4-6:specific faint ubiquitous gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap vent nerve cord A list_7-8:specific vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | faint ubiquitous gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||