Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | post follicle cells ant follicle cells oocyte interfollicular stalk cells somatic cells enrichment_ubiquitous |
| stage8 |  s
 s
 s
 s
 s | cytoplasmic foci somatic cells germline cells_ubiquitous oocyte ant follicle cells post follicle cells |
| stage9 |  s
 s
 s
 s
 s | follicle cells_ubiquitous germline cells_ubiquitous somatic cells follicle cells |
| stage10 |  s
 s
 s
 s
 s
 s | germline cells_ubiquitous somatic cells follicle cells follicle cells_ubiquitous |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Stage 1-3 Exclusionary patterns Annotated by Eric Embryonic localization patterns Medium expression (21-40ms exp) Localized Expressed Yolk cortex exclusion Maternal |
| stage4-5 | 
 | Apical exclusion Degraded Accumlation entire nucleus Intranuclear accumulation Subcellular localization patterns Expressed Localized Perinuclear around blastoderm nuclei Blastoderm nuclei Exclusionary patterns Degraded completely stage 5 Degraded partially stage 4 Perinuclear subset of nuclei Degradation maternal transcripts Accumlation in subset nuclei Nuclei-associated localization Pole cell exclusion Zygotic post blastoderm nuclei Stage 4-5 Subset blastoderm nuclei Perinuclear localization Local terms for zyg transcripts vent blastoderm nuclei Embryonic localization patterns Maternal |
| stage6-7 | 
 | Localized Local terms for zyg transcripts Subcellular localization patterns Intranuclear accumulation post blastoderm nuclei Subset blastoderm nuclei Expressed Blastoderm nuclei vent blastoderm nuclei Nuclei-associated localization Stage 6-7 Accumlation entire nucleus Zygotic Accumlation in subset nuclei |
| stage8-9 | 
 | Expressed Intranuclear accumulation Subset blastoderm nuclei Subcellular localization patterns Localized Local terms for zyg transcripts Stage 8-9 Blastoderm nuclei Accumlation in subset nuclei Nuclei-associated localization Zygotic Accumlation entire nucleus Segmented pattern |
| stage10- | 
 | Sensory sys CNS Blastoderm nuclei Subcellular localization patterns Expressed Stage 10- Localized Zygotic Head Brain vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | gap list_4-6:specific faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap list_7-8:specific vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||