Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | interfollicular stalk cells enrichment_ubiquitous oocyte somatic cells post follicle cells ant follicle cells |
| stage8 |  s
 s
 s
 s
 s | oocyte somatic cells cytoplasmic foci post follicle cells ant follicle cells germline cells_ubiquitous |
| stage9 |  s
 s
 s
 s
 s | somatic cells follicle cells germline cells_ubiquitous follicle cells_ubiquitous |
| stage10 |  s
 s
 s
 s
 s
 s | germline cells_ubiquitous follicle cells_ubiquitous follicle cells somatic cells |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Exclusionary patterns Medium expression (21-40ms exp) Annotated by Eric Yolk cortex exclusion Expressed Localized Stage 1-3 Embryonic localization patterns Maternal |
| stage4-5 | 
 | Exclusionary patterns Intranuclear accumulation Zygotic Pole cell exclusion Local terms for zyg transcripts Degradation maternal transcripts Perinuclear subset of nuclei Stage 4-5 Perinuclear localization Localized Nuclei-associated localization Apical exclusion Blastoderm nuclei Subcellular localization patterns post blastoderm nuclei Accumlation entire nucleus Perinuclear around blastoderm nuclei Accumlation in subset nuclei Subset blastoderm nuclei vent blastoderm nuclei Degraded Degraded completely stage 5 Expressed Embryonic localization patterns Degraded partially stage 4 Maternal |
| stage6-7 | 
 | vent blastoderm nuclei Local terms for zyg transcripts Subset blastoderm nuclei Accumlation in subset nuclei post blastoderm nuclei Accumlation entire nucleus Zygotic Intranuclear accumulation Subcellular localization patterns Stage 6-7 Blastoderm nuclei Nuclei-associated localization Localized Expressed |
| stage8-9 | 
 | Subset blastoderm nuclei Local terms for zyg transcripts Accumlation in subset nuclei Segmented pattern Zygotic Intranuclear accumulation Subcellular localization patterns Accumlation entire nucleus Blastoderm nuclei Stage 8-9 Nuclei-associated localization Localized Expressed |
| stage10- | 
 | Stage 10- Subcellular localization patterns Zygotic Brain Sensory sys Expressed CNS Localized Head Blastoderm nuclei vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | faint ubiquitous list_4-6:specific gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap list_7-8:specific vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||