Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | oocyte interfollicular stalk cells ant follicle cells enrichment_ubiquitous post follicle cells somatic cells |
| stage8 |  s
 s
 s
 s
 s | ant follicle cells post follicle cells somatic cells germline cells_ubiquitous cytoplasmic foci oocyte |
| stage9 |  s
 s
 s
 s
 s | follicle cells germline cells_ubiquitous somatic cells follicle cells_ubiquitous |
| stage10 |  s
 s
 s
 s
 s
 s | somatic cells germline cells_ubiquitous follicle cells_ubiquitous follicle cells |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Stage 1-3 Expressed Annotated by Eric Embryonic localization patterns Yolk cortex exclusion Exclusionary patterns Medium expression (21-40ms exp) Localized Maternal |
| stage4-5 | 
 | Stage 4-5 Exclusionary patterns Pole cell exclusion Zygotic Degraded partially stage 4 Subset blastoderm nuclei Expressed Accumlation entire nucleus Degraded Degraded completely stage 5 Degradation maternal transcripts Subcellular localization patterns Embryonic localization patterns Perinuclear subset of nuclei Perinuclear localization Nuclei-associated localization Localized Accumlation in subset nuclei Blastoderm nuclei Local terms for zyg transcripts post blastoderm nuclei Perinuclear around blastoderm nuclei Apical exclusion vent blastoderm nuclei Intranuclear accumulation Maternal |
| stage6-7 | 
 | Subcellular localization patterns Stage 6-7 Blastoderm nuclei Subset blastoderm nuclei Zygotic Nuclei-associated localization Localized Accumlation in subset nuclei Accumlation entire nucleus post blastoderm nuclei Local terms for zyg transcripts Expressed Intranuclear accumulation vent blastoderm nuclei |
| stage8-9 | 
 | Subcellular localization patterns Accumlation in subset nuclei Nuclei-associated localization Localized Blastoderm nuclei Subset blastoderm nuclei Zygotic Local terms for zyg transcripts Stage 8-9 Expressed Accumlation entire nucleus Segmented pattern Intranuclear accumulation |
| stage10- | 
 | Stage 10- Sensory sys Expressed Zygotic Blastoderm nuclei Localized CNS Subcellular localization patterns Head Brain vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | gap list_4-6:specific faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap list_7-8:specific vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||