Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | enrichment_ubiquitous post follicle cells ant follicle cells somatic cells oocyte interfollicular stalk cells |
| stage8 |  s
 s
 s
 s
 s | post follicle cells somatic cells ant follicle cells cytoplasmic foci oocyte germline cells_ubiquitous |
| stage9 |  s
 s
 s
 s
 s | follicle cells follicle cells_ubiquitous somatic cells germline cells_ubiquitous |
| stage10 |  s
 s
 s
 s
 s
 s | follicle cells somatic cells germline cells_ubiquitous follicle cells_ubiquitous |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Medium expression (21-40ms exp) Exclusionary patterns Embryonic localization patterns Yolk cortex exclusion Localized Annotated by Eric Stage 1-3 Expressed Maternal |
| stage4-5 | 
 | Blastoderm nuclei Degraded completely stage 5 Accumlation in subset nuclei Nuclei-associated localization Degraded partially stage 4 Stage 4-5 post blastoderm nuclei Intranuclear accumulation Expressed Zygotic vent blastoderm nuclei Local terms for zyg transcripts Accumlation entire nucleus Exclusionary patterns Degraded Perinuclear localization Perinuclear around blastoderm nuclei Apical exclusion Subcellular localization patterns Subset blastoderm nuclei Pole cell exclusion Localized Embryonic localization patterns Degradation maternal transcripts Perinuclear subset of nuclei Maternal |
| stage6-7 | 
 | Stage 6-7 Accumlation in subset nuclei Blastoderm nuclei Subcellular localization patterns Subset blastoderm nuclei Nuclei-associated localization Localized post blastoderm nuclei Local terms for zyg transcripts Accumlation entire nucleus Intranuclear accumulation Expressed vent blastoderm nuclei Zygotic |
| stage8-9 | 
 | Local terms for zyg transcripts Accumlation entire nucleus Zygotic Expressed Intranuclear accumulation Localized Stage 8-9 Subset blastoderm nuclei Subcellular localization patterns Nuclei-associated localization Accumlation in subset nuclei Blastoderm nuclei Segmented pattern |
| stage10- | 
 | Subcellular localization patterns CNS Brain Sensory sys Blastoderm nuclei Head Zygotic Expressed Localized Stage 10- vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | list_4-6:specific gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A list_7-8:specific gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | faint ubiquitous gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||