Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | post follicle cells enrichment_ubiquitous interfollicular stalk cells oocyte somatic cells ant follicle cells |
| stage8 |  s
 s
 s
 s
 s | germline cells_ubiquitous oocyte post follicle cells ant follicle cells somatic cells cytoplasmic foci |
| stage9 |  s
 s
 s
 s
 s | germline cells_ubiquitous follicle cells_ubiquitous follicle cells somatic cells |
| stage10 |  s
 s
 s
 s
 s
 s | germline cells_ubiquitous follicle cells_ubiquitous follicle cells somatic cells |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Yolk cortex exclusion Exclusionary patterns Embryonic localization patterns Medium expression (21-40ms exp) Expressed Stage 1-3 Annotated by Eric Localized Maternal |
| stage4-5 | 
 | Perinuclear localization Blastoderm nuclei Pole cell exclusion Degradation maternal transcripts Intranuclear accumulation Localized post blastoderm nuclei Nuclei-associated localization Accumlation entire nucleus Subset blastoderm nuclei Degraded Degraded completely stage 5 Stage 4-5 vent blastoderm nuclei Expressed Subcellular localization patterns Degraded partially stage 4 Perinuclear subset of nuclei Exclusionary patterns Apical exclusion Local terms for zyg transcripts Zygotic Embryonic localization patterns Accumlation in subset nuclei Perinuclear around blastoderm nuclei Maternal |
| stage6-7 | 
 | Blastoderm nuclei Expressed Subcellular localization patterns vent blastoderm nuclei Intranuclear accumulation Localized Nuclei-associated localization Local terms for zyg transcripts Stage 6-7 post blastoderm nuclei Accumlation in subset nuclei Zygotic Subset blastoderm nuclei Accumlation entire nucleus |
| stage8-9 | 
 | Accumlation entire nucleus Subset blastoderm nuclei Segmented pattern Accumlation in subset nuclei Zygotic Local terms for zyg transcripts Nuclei-associated localization Stage 8-9 Intranuclear accumulation Localized Expressed Subcellular localization patterns Blastoderm nuclei |
| stage10- | 
 | Expressed Stage 10- Subcellular localization patterns Brain Blastoderm nuclei Localized Sensory sys Zygotic CNS Head vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | faint ubiquitous list_4-6:specific gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap vent nerve cord A list_7-8:specific vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||