Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | ant follicle cells post follicle cells somatic cells oocyte interfollicular stalk cells enrichment_ubiquitous |
| stage8 |  s
 s
 s
 s
 s | ant follicle cells cytoplasmic foci post follicle cells germline cells_ubiquitous oocyte somatic cells |
| stage9 |  s
 s
 s
 s
 s | follicle cells_ubiquitous germline cells_ubiquitous follicle cells somatic cells |
| stage10 |  s
 s
 s
 s
 s
 s | follicle cells_ubiquitous germline cells_ubiquitous follicle cells somatic cells |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Exclusionary patterns Annotated by Eric Expressed Embryonic localization patterns Localized Medium expression (21-40ms exp) Yolk cortex exclusion Stage 1-3 Maternal |
| stage4-5 | 
 | post blastoderm nuclei Subcellular localization patterns Accumlation in subset nuclei Perinuclear around blastoderm nuclei Degradation maternal transcripts Perinuclear subset of nuclei Subset blastoderm nuclei Apical exclusion Perinuclear localization Zygotic Pole cell exclusion Degraded completely stage 5 Local terms for zyg transcripts Degraded partially stage 4 Degraded Nuclei-associated localization Localized Embryonic localization patterns Accumlation entire nucleus Stage 4-5 Intranuclear accumulation Expressed Exclusionary patterns vent blastoderm nuclei Blastoderm nuclei Maternal |
| stage6-7 | 
 | Local terms for zyg transcripts Subcellular localization patterns post blastoderm nuclei Accumlation entire nucleus Accumlation in subset nuclei Localized Nuclei-associated localization Zygotic Subset blastoderm nuclei Expressed Intranuclear accumulation Blastoderm nuclei vent blastoderm nuclei Stage 6-7 |
| stage8-9 | 
 | Intranuclear accumulation Expressed Stage 8-9 Subset blastoderm nuclei Zygotic Segmented pattern Blastoderm nuclei Local terms for zyg transcripts Subcellular localization patterns Localized Accumlation in subset nuclei Nuclei-associated localization Accumlation entire nucleus |
| stage10- | 
 | Sensory sys Blastoderm nuclei Stage 10- Expressed Zygotic Head Localized Subcellular localization patterns Brain CNS vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | faint ubiquitous gap list_4-6:specific vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap vent nerve cord A list_7-8:specific vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||