Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | somatic cells interfollicular stalk cells post follicle cells ant follicle cells oocyte enrichment_ubiquitous |
| stage8 |  s
 s
 s
 s
 s | germline cells_ubiquitous cytoplasmic foci somatic cells post follicle cells oocyte ant follicle cells |
| stage9 |  s
 s
 s
 s
 s | follicle cells_ubiquitous follicle cells germline cells_ubiquitous somatic cells |
| stage10 |  s
 s
 s
 s
 s
 s | follicle cells_ubiquitous germline cells_ubiquitous somatic cells follicle cells |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Exclusionary patterns Expressed Embryonic localization patterns Annotated by Eric Stage 1-3 Medium expression (21-40ms exp) Yolk cortex exclusion Localized Maternal |
| stage4-5 | 
 | Subcellular localization patterns Perinuclear subset of nuclei vent blastoderm nuclei Degraded completely stage 5 Accumlation entire nucleus Expressed Subset blastoderm nuclei Perinuclear around blastoderm nuclei Localized Degraded partially stage 4 Local terms for zyg transcripts Zygotic Perinuclear localization Embryonic localization patterns Apical exclusion Degradation maternal transcripts Exclusionary patterns post blastoderm nuclei Stage 4-5 Pole cell exclusion Blastoderm nuclei Accumlation in subset nuclei Intranuclear accumulation Nuclei-associated localization Degraded Maternal |
| stage6-7 | 
 | post blastoderm nuclei Localized Nuclei-associated localization Local terms for zyg transcripts Accumlation in subset nuclei Blastoderm nuclei Intranuclear accumulation Stage 6-7 vent blastoderm nuclei Subcellular localization patterns Zygotic Expressed Subset blastoderm nuclei Accumlation entire nucleus |
| stage8-9 | 
 | Stage 8-9 Localized Intranuclear accumulation Segmented pattern Blastoderm nuclei Local terms for zyg transcripts Accumlation in subset nuclei Nuclei-associated localization Zygotic Subcellular localization patterns Accumlation entire nucleus Subset blastoderm nuclei Expressed |
| stage10- | 
 | Subcellular localization patterns Zygotic Stage 10- Expressed Sensory sys Localized Blastoderm nuclei Brain Head CNS vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | list_4-6:specific faint ubiquitous gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap list_7-8:specific vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | faint ubiquitous gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||