Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | ant follicle cells interfollicular stalk cells enrichment_ubiquitous somatic cells post follicle cells oocyte |
| stage8 |  s
 s
 s
 s
 s | oocyte post follicle cells cytoplasmic foci somatic cells germline cells_ubiquitous ant follicle cells |
| stage9 |  s
 s
 s
 s
 s | germline cells_ubiquitous follicle cells somatic cells follicle cells_ubiquitous |
| stage10 |  s
 s
 s
 s
 s
 s | follicle cells_ubiquitous somatic cells follicle cells germline cells_ubiquitous |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Yolk cortex exclusion Medium expression (21-40ms exp) Exclusionary patterns Expressed Localized Annotated by Eric Embryonic localization patterns Stage 1-3 Maternal |
| stage4-5 | 
 | post blastoderm nuclei Perinuclear subset of nuclei Degraded completely stage 5 Degraded partially stage 4 Apical exclusion Zygotic Nuclei-associated localization Localized Intranuclear accumulation Exclusionary patterns Expressed Local terms for zyg transcripts Embryonic localization patterns Perinuclear around blastoderm nuclei Subcellular localization patterns Accumlation entire nucleus Accumlation in subset nuclei Blastoderm nuclei Perinuclear localization Degradation maternal transcripts Pole cell exclusion Stage 4-5 Degraded Subset blastoderm nuclei vent blastoderm nuclei Maternal |
| stage6-7 | 
 | Local terms for zyg transcripts Subcellular localization patterns Stage 6-7 Accumlation entire nucleus Accumlation in subset nuclei vent blastoderm nuclei Subset blastoderm nuclei Blastoderm nuclei post blastoderm nuclei Zygotic Localized Nuclei-associated localization Intranuclear accumulation Expressed |
| stage8-9 | 
 | Stage 8-9 Local terms for zyg transcripts Subcellular localization patterns Accumlation entire nucleus Accumlation in subset nuclei Subset blastoderm nuclei Blastoderm nuclei Zygotic Localized Nuclei-associated localization Intranuclear accumulation Segmented pattern Expressed |
| stage10- | 
 | Blastoderm nuclei Zygotic Head Stage 10- CNS Localized Expressed Sensory sys Brain Subcellular localization patterns vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | gap list_4-6:specific faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap vent nerve cord A list_7-8:specific vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | faint ubiquitous gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||