Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | interfollicular stalk cells post follicle cells somatic cells ant follicle cells enrichment_ubiquitous oocyte |
| stage8 |  s
 s
 s
 s
 s | germline cells_ubiquitous ant follicle cells oocyte post follicle cells cytoplasmic foci somatic cells |
| stage9 |  s
 s
 s
 s
 s | follicle cells_ubiquitous germline cells_ubiquitous somatic cells follicle cells |
| stage10 |  s
 s
 s
 s
 s
 s | follicle cells somatic cells germline cells_ubiquitous follicle cells_ubiquitous |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Exclusionary patterns Yolk cortex exclusion Stage 1-3 Medium expression (21-40ms exp) Embryonic localization patterns Annotated by Eric Expressed Localized Maternal |
| stage4-5 | 
 | Degraded partially stage 4 Apical exclusion Embryonic localization patterns Intranuclear accumulation Degraded Perinuclear localization Stage 4-5 Pole cell exclusion Zygotic Local terms for zyg transcripts Perinuclear subset of nuclei Nuclei-associated localization Exclusionary patterns Accumlation entire nucleus Perinuclear around blastoderm nuclei post blastoderm nuclei Subset blastoderm nuclei Accumlation in subset nuclei Subcellular localization patterns Degradation maternal transcripts Expressed Blastoderm nuclei vent blastoderm nuclei Degraded completely stage 5 Localized Maternal |
| stage6-7 | 
 | vent blastoderm nuclei Localized Local terms for zyg transcripts Stage 6-7 Zygotic Intranuclear accumulation Blastoderm nuclei Expressed Accumlation entire nucleus Subcellular localization patterns post blastoderm nuclei Accumlation in subset nuclei Subset blastoderm nuclei Nuclei-associated localization |
| stage8-9 | 
 | Segmented pattern Accumlation entire nucleus Subcellular localization patterns Subset blastoderm nuclei Accumlation in subset nuclei Stage 8-9 Nuclei-associated localization Localized Local terms for zyg transcripts Zygotic Intranuclear accumulation Blastoderm nuclei Expressed |
| stage10- | 
 | Subcellular localization patterns Head CNS Zygotic Localized Stage 10- Brain Expressed Sensory sys Blastoderm nuclei vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | gap faint ubiquitous list_4-6:specific vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap list_7-8:specific vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||