Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | interfollicular stalk cells enrichment_ubiquitous oocyte post follicle cells ant follicle cells somatic cells |
| stage8 |  s
 s
 s
 s
 s | somatic cells cytoplasmic foci germline cells_ubiquitous ant follicle cells oocyte post follicle cells |
| stage9 |  s
 s
 s
 s
 s | follicle cells_ubiquitous somatic cells germline cells_ubiquitous follicle cells |
| stage10 |  s
 s
 s
 s
 s
 s | follicle cells germline cells_ubiquitous somatic cells follicle cells_ubiquitous |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Localized Medium expression (21-40ms exp) Annotated by Eric Exclusionary patterns Yolk cortex exclusion Embryonic localization patterns Stage 1-3 Expressed Maternal |
| stage4-5 | 
 | Blastoderm nuclei Degradation maternal transcripts Degraded partially stage 4 Accumlation in subset nuclei Stage 4-5 Perinuclear subset of nuclei Embryonic localization patterns Expressed vent blastoderm nuclei Perinuclear around blastoderm nuclei Subset blastoderm nuclei Intranuclear accumulation Nuclei-associated localization Perinuclear localization Apical exclusion Zygotic Degraded completely stage 5 Localized Local terms for zyg transcripts post blastoderm nuclei Subcellular localization patterns Exclusionary patterns Degraded Pole cell exclusion Accumlation entire nucleus Maternal |
| stage6-7 | 
 | Accumlation in subset nuclei Subcellular localization patterns Blastoderm nuclei Accumlation entire nucleus Localized Local terms for zyg transcripts post blastoderm nuclei Intranuclear accumulation Nuclei-associated localization Zygotic Stage 6-7 Expressed Subset blastoderm nuclei vent blastoderm nuclei |
| stage8-9 | 
 | Expressed Subset blastoderm nuclei Intranuclear accumulation Segmented pattern Nuclei-associated localization Stage 8-9 Zygotic Localized Local terms for zyg transcripts Accumlation in subset nuclei Blastoderm nuclei Subcellular localization patterns Accumlation entire nucleus |
| stage10- | 
 | Zygotic Stage 10- CNS Expressed Brain Head Blastoderm nuclei Subcellular localization patterns Sensory sys Localized vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | faint ubiquitous list_4-6:specific gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap vent nerve cord A list_7-8:specific vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | faint ubiquitous gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||