Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | ant follicle cells interfollicular stalk cells somatic cells oocyte enrichment_ubiquitous post follicle cells |
| stage8 |  s
 s
 s
 s
 s | post follicle cells oocyte somatic cells germline cells_ubiquitous cytoplasmic foci ant follicle cells |
| stage9 |  s
 s
 s
 s
 s | germline cells_ubiquitous somatic cells follicle cells_ubiquitous follicle cells |
| stage10 |  s
 s
 s
 s
 s
 s | follicle cells_ubiquitous follicle cells germline cells_ubiquitous somatic cells |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Annotated by Eric Expressed Exclusionary patterns Embryonic localization patterns Medium expression (21-40ms exp) Localized Yolk cortex exclusion Stage 1-3 Maternal |
| stage4-5 | 
 | vent blastoderm nuclei Localized Stage 4-5 Blastoderm nuclei Degraded Embryonic localization patterns Local terms for zyg transcripts Intranuclear accumulation Perinuclear localization Perinuclear around blastoderm nuclei Nuclei-associated localization Subcellular localization patterns Expressed Degradation maternal transcripts Zygotic Apical exclusion Exclusionary patterns Perinuclear subset of nuclei post blastoderm nuclei Accumlation entire nucleus Pole cell exclusion Subset blastoderm nuclei Accumlation in subset nuclei Degraded partially stage 4 Degraded completely stage 5 Maternal |
| stage6-7 | 
 | Intranuclear accumulation Nuclei-associated localization Local terms for zyg transcripts Blastoderm nuclei vent blastoderm nuclei Localized Stage 6-7 Zygotic Subset blastoderm nuclei Accumlation in subset nuclei Subcellular localization patterns Expressed post blastoderm nuclei Accumlation entire nucleus |
| stage8-9 | 
 | Segmented pattern Subcellular localization patterns Expressed Accumlation entire nucleus Zygotic Subset blastoderm nuclei Accumlation in subset nuclei Blastoderm nuclei Stage 8-9 Localized Intranuclear accumulation Nuclei-associated localization Local terms for zyg transcripts |
| stage10- | 
 | Zygotic Stage 10- Expressed Subcellular localization patterns Sensory sys Brain CNS Head Blastoderm nuclei Localized vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | gap faint ubiquitous list_4-6:specific vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap list_7-8:specific vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||