Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | somatic cells interfollicular stalk cells enrichment_ubiquitous oocyte ant follicle cells post follicle cells |
| stage8 |  s
 s
 s
 s
 s | germline cells_ubiquitous post follicle cells cytoplasmic foci oocyte ant follicle cells somatic cells |
| stage9 |  s
 s
 s
 s
 s | follicle cells_ubiquitous germline cells_ubiquitous somatic cells follicle cells |
| stage10 |  s
 s
 s
 s
 s
 s | follicle cells_ubiquitous germline cells_ubiquitous somatic cells follicle cells |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Expressed Annotated by Eric Yolk cortex exclusion Medium expression (21-40ms exp) Embryonic localization patterns Localized Stage 1-3 Exclusionary patterns Maternal |
| stage4-5 | 
 | Perinuclear localization Apical exclusion Stage 4-5 Localized Degraded partially stage 4 Perinuclear around blastoderm nuclei Accumlation in subset nuclei Local terms for zyg transcripts Zygotic Pole cell exclusion Accumlation entire nucleus post blastoderm nuclei vent blastoderm nuclei Degraded completely stage 5 Embryonic localization patterns Perinuclear subset of nuclei Subset blastoderm nuclei Exclusionary patterns Subcellular localization patterns Expressed Degradation maternal transcripts Blastoderm nuclei Degraded Nuclei-associated localization Intranuclear accumulation Maternal |
| stage6-7 | 
 | Accumlation in subset nuclei Local terms for zyg transcripts Subcellular localization patterns Expressed Zygotic Blastoderm nuclei Accumlation entire nucleus Nuclei-associated localization Intranuclear accumulation post blastoderm nuclei vent blastoderm nuclei Stage 6-7 Localized Subset blastoderm nuclei |
| stage8-9 | 
 | Subcellular localization patterns Zygotic Expressed Accumlation in subset nuclei Local terms for zyg transcripts Stage 8-9 Accumlation entire nucleus Intranuclear accumulation Nuclei-associated localization Blastoderm nuclei Localized Subset blastoderm nuclei Segmented pattern |
| stage10- | 
 | Blastoderm nuclei CNS Stage 10- Zygotic Expressed Subcellular localization patterns Brain Head Sensory sys Localized vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | gap list_4-6:specific faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A list_7-8:specific gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||