Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | ant follicle cells somatic cells enrichment_ubiquitous post follicle cells interfollicular stalk cells oocyte |
| stage8 |  s
 s
 s
 s
 s | germline cells_ubiquitous oocyte post follicle cells ant follicle cells somatic cells cytoplasmic foci |
| stage9 |  s
 s
 s
 s
 s | follicle cells_ubiquitous germline cells_ubiquitous follicle cells somatic cells |
| stage10 |  s
 s
 s
 s
 s
 s | follicle cells_ubiquitous germline cells_ubiquitous somatic cells follicle cells |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Annotated by Eric Exclusionary patterns Medium expression (21-40ms exp) Embryonic localization patterns Expressed Localized Yolk cortex exclusion Stage 1-3 Maternal |
| stage4-5 | 
 | Stage 4-5 Zygotic Nuclei-associated localization Blastoderm nuclei post blastoderm nuclei Perinuclear around blastoderm nuclei Exclusionary patterns Pole cell exclusion Degraded partially stage 4 Perinuclear localization Degradation maternal transcripts Subset blastoderm nuclei Accumlation in subset nuclei Embryonic localization patterns Degraded completely stage 5 Perinuclear subset of nuclei Apical exclusion Subcellular localization patterns Intranuclear accumulation Expressed Degraded Local terms for zyg transcripts vent blastoderm nuclei Accumlation entire nucleus Localized Maternal |
| stage6-7 | 
 | Accumlation in subset nuclei Localized Subset blastoderm nuclei Accumlation entire nucleus Local terms for zyg transcripts vent blastoderm nuclei Blastoderm nuclei post blastoderm nuclei Stage 6-7 Subcellular localization patterns Intranuclear accumulation Expressed Nuclei-associated localization Zygotic |
| stage8-9 | 
 | Accumlation in subset nuclei Localized Subset blastoderm nuclei Accumlation entire nucleus Stage 8-9 Local terms for zyg transcripts Segmented pattern Blastoderm nuclei Subcellular localization patterns Nuclei-associated localization Intranuclear accumulation Expressed Zygotic |
| stage10- | 
 | Blastoderm nuclei Expressed Subcellular localization patterns CNS Zygotic Brain Sensory sys Head Localized Stage 10- vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | faint ubiquitous gap list_4-6:specific vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | list_7-8:specific vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||