Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | post follicle cells ant follicle cells somatic cells oocyte enrichment_ubiquitous interfollicular stalk cells |
| stage8 |  s
 s
 s
 s
 s | post follicle cells germline cells_ubiquitous ant follicle cells somatic cells oocyte cytoplasmic foci |
| stage9 |  s
 s
 s
 s
 s | somatic cells follicle cells_ubiquitous follicle cells germline cells_ubiquitous |
| stage10 |  s
 s
 s
 s
 s
 s | germline cells_ubiquitous follicle cells somatic cells follicle cells_ubiquitous |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Embryonic localization patterns Exclusionary patterns Medium expression (21-40ms exp) Stage 1-3 Annotated by Eric Expressed Localized Yolk cortex exclusion Maternal |
| stage4-5 | 
 | Pole cell exclusion Blastoderm nuclei Degradation maternal transcripts Degraded completely stage 5 Zygotic Perinuclear localization Degraded Exclusionary patterns post blastoderm nuclei Intranuclear accumulation Degraded partially stage 4 Apical exclusion Perinuclear around blastoderm nuclei Localized Accumlation in subset nuclei vent blastoderm nuclei Stage 4-5 Subcellular localization patterns Subset blastoderm nuclei Accumlation entire nucleus Embryonic localization patterns Expressed Perinuclear subset of nuclei Nuclei-associated localization Local terms for zyg transcripts Maternal |
| stage6-7 | 
 | post blastoderm nuclei Intranuclear accumulation Expressed Nuclei-associated localization Local terms for zyg transcripts Blastoderm nuclei Localized Zygotic Stage 6-7 Accumlation in subset nuclei vent blastoderm nuclei Subcellular localization patterns Accumlation entire nucleus Subset blastoderm nuclei |
| stage8-9 | 
 | Local terms for zyg transcripts Nuclei-associated localization Expressed Stage 8-9 Intranuclear accumulation Subcellular localization patterns Subset blastoderm nuclei Accumlation entire nucleus Accumlation in subset nuclei Segmented pattern Localized Zygotic Blastoderm nuclei |
| stage10- | 
 | Zygotic Localized Blastoderm nuclei Brain CNS Subcellular localization patterns Head Sensory sys Stage 10- Expressed vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | list_4-6:specific gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap list_7-8:specific vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | faint ubiquitous gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||