Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | interfollicular stalk cells somatic cells oocyte enrichment_ubiquitous post follicle cells ant follicle cells |
| stage8 |  s
 s
 s
 s
 s | germline cells_ubiquitous post follicle cells ant follicle cells somatic cells cytoplasmic foci oocyte |
| stage9 |  s
 s
 s
 s
 s | germline cells_ubiquitous follicle cells_ubiquitous somatic cells follicle cells |
| stage10 |  s
 s
 s
 s
 s
 s | follicle cells_ubiquitous somatic cells follicle cells germline cells_ubiquitous |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Embryonic localization patterns Annotated by Eric Yolk cortex exclusion Expressed Medium expression (21-40ms exp) Exclusionary patterns Localized Stage 1-3 Maternal |
| stage4-5 | 
 | Nuclei-associated localization Apical exclusion Subcellular localization patterns Degraded completely stage 5 Perinuclear subset of nuclei Expressed vent blastoderm nuclei Intranuclear accumulation post blastoderm nuclei Perinuclear around blastoderm nuclei Accumlation entire nucleus Degraded Zygotic Embryonic localization patterns Degraded partially stage 4 Blastoderm nuclei Exclusionary patterns Subset blastoderm nuclei Stage 4-5 Accumlation in subset nuclei Perinuclear localization Local terms for zyg transcripts Localized Degradation maternal transcripts Pole cell exclusion Maternal |
| stage6-7 | 
 | post blastoderm nuclei Nuclei-associated localization Stage 6-7 Accumlation entire nucleus Zygotic Subcellular localization patterns Expressed Blastoderm nuclei vent blastoderm nuclei Intranuclear accumulation Subset blastoderm nuclei Accumlation in subset nuclei Local terms for zyg transcripts Localized |
| stage8-9 | 
 | Nuclei-associated localization Accumlation entire nucleus Subcellular localization patterns Zygotic Blastoderm nuclei Expressed Accumlation in subset nuclei Subset blastoderm nuclei Intranuclear accumulation Local terms for zyg transcripts Segmented pattern Stage 8-9 Localized |
| stage10- | 
 | Zygotic Subcellular localization patterns Stage 10- Expressed Blastoderm nuclei Sensory sys Head Localized CNS Brain vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | faint ubiquitous list_4-6:specific gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A list_7-8:specific gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||