Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | enrichment_ubiquitous somatic cells post follicle cells ant follicle cells interfollicular stalk cells oocyte |
| stage8 |  s
 s
 s
 s
 s | germline cells_ubiquitous oocyte cytoplasmic foci somatic cells ant follicle cells post follicle cells |
| stage9 |  s
 s
 s
 s
 s | germline cells_ubiquitous follicle cells follicle cells_ubiquitous somatic cells |
| stage10 |  s
 s
 s
 s
 s
 s | follicle cells follicle cells_ubiquitous somatic cells germline cells_ubiquitous |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Medium expression (21-40ms exp) Localized Annotated by Eric Expressed Stage 1-3 Embryonic localization patterns Exclusionary patterns Yolk cortex exclusion Maternal |
| stage4-5 | 
 | post blastoderm nuclei Accumlation in subset nuclei Intranuclear accumulation Blastoderm nuclei Exclusionary patterns Degraded completely stage 5 Perinuclear localization Pole cell exclusion Apical exclusion Subcellular localization patterns Accumlation entire nucleus Degraded partially stage 4 Degradation maternal transcripts Localized Expressed Zygotic Perinuclear around blastoderm nuclei vent blastoderm nuclei Nuclei-associated localization Embryonic localization patterns Degraded Stage 4-5 Subset blastoderm nuclei Perinuclear subset of nuclei Local terms for zyg transcripts Maternal |
| stage6-7 | 
 | vent blastoderm nuclei post blastoderm nuclei Accumlation in subset nuclei Expressed Intranuclear accumulation Zygotic Blastoderm nuclei Nuclei-associated localization Accumlation entire nucleus Stage 6-7 Subcellular localization patterns Local terms for zyg transcripts Localized Subset blastoderm nuclei |
| stage8-9 | 
 | Subcellular localization patterns Accumlation entire nucleus Subset blastoderm nuclei Stage 8-9 Localized Local terms for zyg transcripts Segmented pattern Zygotic Intranuclear accumulation Blastoderm nuclei Expressed Accumlation in subset nuclei Nuclei-associated localization |
| stage10- | 
 | Head Subcellular localization patterns Brain Localized Sensory sys Zygotic Blastoderm nuclei CNS Expressed Stage 10- vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | list_4-6:specific faint ubiquitous gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A list_7-8:specific gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||