Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | enrichment_ubiquitous ant follicle cells oocyte interfollicular stalk cells somatic cells post follicle cells |
| stage8 |  s
 s
 s
 s
 s | somatic cells germline cells_ubiquitous oocyte cytoplasmic foci ant follicle cells post follicle cells |
| stage9 |  s
 s
 s
 s
 s | germline cells_ubiquitous somatic cells follicle cells follicle cells_ubiquitous |
| stage10 |  s
 s
 s
 s
 s
 s | somatic cells germline cells_ubiquitous follicle cells_ubiquitous follicle cells |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Stage 1-3 Localized Yolk cortex exclusion Annotated by Eric Expressed Exclusionary patterns Medium expression (21-40ms exp) Embryonic localization patterns Maternal |
| stage4-5 | 
 | Degraded completely stage 5 Stage 4-5 Local terms for zyg transcripts Accumlation entire nucleus Perinuclear around blastoderm nuclei Nuclei-associated localization Perinuclear subset of nuclei Expressed vent blastoderm nuclei Intranuclear accumulation Accumlation in subset nuclei Zygotic Apical exclusion Pole cell exclusion Perinuclear localization Blastoderm nuclei Degraded post blastoderm nuclei Subset blastoderm nuclei Localized Degraded partially stage 4 Subcellular localization patterns Embryonic localization patterns Degradation maternal transcripts Exclusionary patterns Maternal |
| stage6-7 | 
 | Subcellular localization patterns Zygotic Intranuclear accumulation Expressed vent blastoderm nuclei Accumlation in subset nuclei Local terms for zyg transcripts post blastoderm nuclei Localized Subset blastoderm nuclei Nuclei-associated localization Accumlation entire nucleus Blastoderm nuclei Stage 6-7 |
| stage8-9 | 
 | Subcellular localization patterns Zygotic Expressed Intranuclear accumulation Stage 8-9 Accumlation in subset nuclei Local terms for zyg transcripts Localized Subset blastoderm nuclei Nuclei-associated localization Accumlation entire nucleus Segmented pattern Blastoderm nuclei |
| stage10- | 
 | CNS Localized Stage 10- Blastoderm nuclei Sensory sys Zygotic Subcellular localization patterns Brain Head Expressed vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | list_4-6:specific faint ubiquitous gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | list_7-8:specific gap vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | faint ubiquitous gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||