Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | ant follicle cells interfollicular stalk cells somatic cells oocyte enrichment_ubiquitous post follicle cells |
| stage8 |  s
 s
 s
 s
 s | ant follicle cells somatic cells germline cells_ubiquitous cytoplasmic foci oocyte post follicle cells |
| stage9 |  s
 s
 s
 s
 s | somatic cells follicle cells_ubiquitous follicle cells germline cells_ubiquitous |
| stage10 |  s
 s
 s
 s
 s
 s | follicle cells_ubiquitous somatic cells follicle cells germline cells_ubiquitous |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Exclusionary patterns Stage 1-3 Medium expression (21-40ms exp) Localized Annotated by Eric Expressed Embryonic localization patterns Yolk cortex exclusion Maternal |
| stage4-5 | 
 | Blastoderm nuclei Degraded partially stage 4 post blastoderm nuclei Degradation maternal transcripts Degraded completely stage 5 Exclusionary patterns Perinuclear localization Apical exclusion Perinuclear around blastoderm nuclei Nuclei-associated localization Embryonic localization patterns Perinuclear subset of nuclei Pole cell exclusion Local terms for zyg transcripts Stage 4-5 Subcellular localization patterns Degraded vent blastoderm nuclei Subset blastoderm nuclei Localized Intranuclear accumulation Accumlation entire nucleus Expressed Zygotic Accumlation in subset nuclei Maternal |
| stage6-7 | 
 | Intranuclear accumulation Accumlation entire nucleus Zygotic Nuclei-associated localization Expressed Accumlation in subset nuclei Local terms for zyg transcripts Stage 6-7 Blastoderm nuclei Subcellular localization patterns Subset blastoderm nuclei vent blastoderm nuclei post blastoderm nuclei Localized |
| stage8-9 | 
 | Nuclei-associated localization Segmented pattern Expressed Zygotic Accumlation in subset nuclei Accumlation entire nucleus Intranuclear accumulation Stage 8-9 Subcellular localization patterns Subset blastoderm nuclei Blastoderm nuclei Local terms for zyg transcripts Localized |
| stage10- | 
 | Expressed Zygotic Stage 10- CNS Sensory sys Subcellular localization patterns Blastoderm nuclei Head Brain Localized vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | faint ubiquitous gap list_4-6:specific vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap list_7-8:specific vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | faint ubiquitous gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||