Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | oocyte interfollicular stalk cells ant follicle cells enrichment_ubiquitous somatic cells post follicle cells |
| stage8 |  s
 s
 s
 s
 s | oocyte cytoplasmic foci ant follicle cells germline cells_ubiquitous post follicle cells somatic cells |
| stage9 |  s
 s
 s
 s
 s | somatic cells follicle cells follicle cells_ubiquitous germline cells_ubiquitous |
| stage10 |  s
 s
 s
 s
 s
 s | follicle cells_ubiquitous germline cells_ubiquitous follicle cells somatic cells |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Localized Expressed Yolk cortex exclusion Annotated by Eric Embryonic localization patterns Stage 1-3 Exclusionary patterns Medium expression (21-40ms exp) Maternal |
| stage4-5 | 
 | Blastoderm nuclei Degraded partially stage 4 Degraded Local terms for zyg transcripts Exclusionary patterns Pole cell exclusion Accumlation in subset nuclei Degradation maternal transcripts vent blastoderm nuclei Subset blastoderm nuclei Accumlation entire nucleus Subcellular localization patterns Apical exclusion Nuclei-associated localization Expressed Intranuclear accumulation Stage 4-5 Embryonic localization patterns Perinuclear localization Perinuclear subset of nuclei Localized Zygotic post blastoderm nuclei Degraded completely stage 5 Perinuclear around blastoderm nuclei Maternal |
| stage6-7 | 
 | Accumlation in subset nuclei Blastoderm nuclei Intranuclear accumulation Local terms for zyg transcripts Subcellular localization patterns Nuclei-associated localization Expressed Subset blastoderm nuclei Localized vent blastoderm nuclei Zygotic Accumlation entire nucleus Stage 6-7 post blastoderm nuclei |
| stage8-9 | 
 | Localized Subset blastoderm nuclei Accumlation entire nucleus Zygotic Nuclei-associated localization Subcellular localization patterns Expressed Blastoderm nuclei Intranuclear accumulation Local terms for zyg transcripts Stage 8-9 Segmented pattern Accumlation in subset nuclei |
| stage10- | 
 | Sensory sys Head Blastoderm nuclei Stage 10- Subcellular localization patterns Expressed CNS Localized Zygotic Brain vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | faint ubiquitous gap list_4-6:specific vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A list_7-8:specific gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | faint ubiquitous gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||