Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | enrichment_ubiquitous post follicle cells oocyte ant follicle cells interfollicular stalk cells somatic cells |
| stage8 |  s
 s
 s
 s
 s | somatic cells germline cells_ubiquitous ant follicle cells oocyte cytoplasmic foci post follicle cells |
| stage9 |  s
 s
 s
 s
 s | somatic cells germline cells_ubiquitous follicle cells_ubiquitous follicle cells |
| stage10 |  s
 s
 s
 s
 s
 s | germline cells_ubiquitous somatic cells follicle cells_ubiquitous follicle cells |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Yolk cortex exclusion Medium expression (21-40ms exp) Embryonic localization patterns Exclusionary patterns Expressed Localized Stage 1-3 Annotated by Eric Maternal |
| stage4-5 | 
 | Localized Accumlation in subset nuclei Exclusionary patterns Degraded completely stage 5 Pole cell exclusion Apical exclusion Perinuclear around blastoderm nuclei Subcellular localization patterns Degradation maternal transcripts Accumlation entire nucleus post blastoderm nuclei Embryonic localization patterns Perinuclear subset of nuclei Stage 4-5 vent blastoderm nuclei Subset blastoderm nuclei Expressed Zygotic Degraded Nuclei-associated localization Blastoderm nuclei Degraded partially stage 4 Local terms for zyg transcripts Intranuclear accumulation Perinuclear localization Maternal |
| stage6-7 | 
 | Blastoderm nuclei Nuclei-associated localization Accumlation entire nucleus post blastoderm nuclei Local terms for zyg transcripts Intranuclear accumulation Localized Accumlation in subset nuclei Stage 6-7 vent blastoderm nuclei Subset blastoderm nuclei Expressed Zygotic Subcellular localization patterns |
| stage8-9 | 
 | Intranuclear accumulation Accumlation entire nucleus Nuclei-associated localization Blastoderm nuclei Local terms for zyg transcripts Zygotic Segmented pattern Stage 8-9 Subcellular localization patterns Accumlation in subset nuclei Localized Expressed Subset blastoderm nuclei |
| stage10- | 
 | Head Stage 10- Sensory sys Brain Blastoderm nuclei Zygotic Subcellular localization patterns Localized Expressed CNS vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | list_4-6:specific faint ubiquitous gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | list_7-8:specific vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||