Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | enrichment_ubiquitous post follicle cells oocyte ant follicle cells somatic cells interfollicular stalk cells |
| stage8 |  s
 s
 s
 s
 s | somatic cells post follicle cells oocyte germline cells_ubiquitous cytoplasmic foci ant follicle cells |
| stage9 |  s
 s
 s
 s
 s | follicle cells_ubiquitous somatic cells follicle cells germline cells_ubiquitous |
| stage10 |  s
 s
 s
 s
 s
 s | germline cells_ubiquitous follicle cells somatic cells follicle cells_ubiquitous |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Expressed Exclusionary patterns Stage 1-3 Yolk cortex exclusion Localized Embryonic localization patterns Annotated by Eric Medium expression (21-40ms exp) Maternal |
| stage4-5 | 
 | Local terms for zyg transcripts Apical exclusion Blastoderm nuclei Perinuclear subset of nuclei Localized Perinuclear around blastoderm nuclei Expressed Zygotic Degraded Stage 4-5 Subcellular localization patterns Perinuclear localization Accumlation in subset nuclei Degradation maternal transcripts post blastoderm nuclei Embryonic localization patterns Intranuclear accumulation Pole cell exclusion Degraded partially stage 4 Degraded completely stage 5 vent blastoderm nuclei Nuclei-associated localization Subset blastoderm nuclei Accumlation entire nucleus Exclusionary patterns Maternal |
| stage6-7 | 
 | post blastoderm nuclei Localized Intranuclear accumulation Subcellular localization patterns Local terms for zyg transcripts Blastoderm nuclei Accumlation in subset nuclei Nuclei-associated localization Expressed vent blastoderm nuclei Accumlation entire nucleus Subset blastoderm nuclei Stage 6-7 Zygotic |
| stage8-9 | 
 | Localized Intranuclear accumulation Segmented pattern Accumlation in subset nuclei Blastoderm nuclei Local terms for zyg transcripts Subcellular localization patterns Stage 8-9 Subset blastoderm nuclei Accumlation entire nucleus Zygotic Nuclei-associated localization Expressed |
| stage10- | 
 | CNS Sensory sys Stage 10- Localized Subcellular localization patterns Blastoderm nuclei Head Expressed Zygotic Brain vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | list_4-6:specific faint ubiquitous gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap vent nerve cord A list_7-8:specific vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | faint ubiquitous gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||