Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | oocyte post follicle cells somatic cells interfollicular stalk cells ant follicle cells enrichment_ubiquitous |
| stage8 |  s
 s
 s
 s
 s | germline cells_ubiquitous ant follicle cells oocyte somatic cells post follicle cells cytoplasmic foci |
| stage9 |  s
 s
 s
 s
 s | follicle cells_ubiquitous somatic cells follicle cells germline cells_ubiquitous |
| stage10 |  s
 s
 s
 s
 s
 s | germline cells_ubiquitous follicle cells follicle cells_ubiquitous somatic cells |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Medium expression (21-40ms exp) Yolk cortex exclusion Exclusionary patterns Expressed Localized Stage 1-3 Embryonic localization patterns Annotated by Eric Maternal |
| stage4-5 | 
 | Localized Degraded Exclusionary patterns Subset blastoderm nuclei Local terms for zyg transcripts Stage 4-5 Intranuclear accumulation Perinuclear subset of nuclei Blastoderm nuclei Degradation maternal transcripts Perinuclear around blastoderm nuclei Expressed Apical exclusion Accumlation entire nucleus vent blastoderm nuclei Subcellular localization patterns Pole cell exclusion post blastoderm nuclei Degraded completely stage 5 Embryonic localization patterns Nuclei-associated localization Perinuclear localization Zygotic Degraded partially stage 4 Accumlation in subset nuclei Maternal |
| stage6-7 | 
 | Accumlation in subset nuclei Zygotic Nuclei-associated localization Blastoderm nuclei post blastoderm nuclei Subcellular localization patterns Intranuclear accumulation vent blastoderm nuclei Subset blastoderm nuclei Local terms for zyg transcripts Accumlation entire nucleus Stage 6-7 Expressed Localized |
| stage8-9 | 
 | Zygotic Nuclei-associated localization Blastoderm nuclei Accumlation in subset nuclei Intranuclear accumulation Segmented pattern Subcellular localization patterns Accumlation entire nucleus Local terms for zyg transcripts Subset blastoderm nuclei Stage 8-9 Expressed Localized |
| stage10- | 
 | Expressed Head Localized Brain Subcellular localization patterns Sensory sys Stage 10- Zygotic Blastoderm nuclei CNS vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | faint ubiquitous list_4-6:specific gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap list_7-8:specific vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | faint ubiquitous gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||