Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | oocyte somatic cells post follicle cells enrichment_ubiquitous ant follicle cells interfollicular stalk cells |
| stage8 |  s
 s
 s
 s
 s | post follicle cells cytoplasmic foci germline cells_ubiquitous somatic cells oocyte ant follicle cells |
| stage9 |  s
 s
 s
 s
 s | germline cells_ubiquitous somatic cells follicle cells follicle cells_ubiquitous |
| stage10 |  s
 s
 s
 s
 s
 s | follicle cells follicle cells_ubiquitous somatic cells germline cells_ubiquitous |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Embryonic localization patterns Localized Stage 1-3 Medium expression (21-40ms exp) Yolk cortex exclusion Annotated by Eric Expressed Exclusionary patterns Maternal |
| stage4-5 | 
 | Perinuclear subset of nuclei vent blastoderm nuclei Expressed Degraded partially stage 4 Accumlation entire nucleus Degraded Degraded completely stage 5 Subset blastoderm nuclei Nuclei-associated localization Intranuclear accumulation Subcellular localization patterns Perinuclear around blastoderm nuclei Apical exclusion Stage 4-5 Zygotic Local terms for zyg transcripts Exclusionary patterns Blastoderm nuclei Accumlation in subset nuclei Perinuclear localization post blastoderm nuclei Localized Pole cell exclusion Degradation maternal transcripts Embryonic localization patterns Maternal |
| stage6-7 | 
 | Accumlation in subset nuclei Blastoderm nuclei Accumlation entire nucleus Local terms for zyg transcripts Expressed vent blastoderm nuclei Zygotic Localized post blastoderm nuclei Subcellular localization patterns Intranuclear accumulation Nuclei-associated localization Stage 6-7 Subset blastoderm nuclei |
| stage8-9 | 
 | Accumlation entire nucleus Local terms for zyg transcripts Expressed Segmented pattern Zygotic Accumlation in subset nuclei Blastoderm nuclei Subcellular localization patterns Intranuclear accumulation Nuclei-associated localization Subset blastoderm nuclei Localized Stage 8-9 |
| stage10- | 
 | Blastoderm nuclei Sensory sys Zygotic Head Expressed Brain Localized Stage 10- CNS Subcellular localization patterns vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | faint ubiquitous list_4-6:specific gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | list_7-8:specific vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | faint ubiquitous gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||