Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | somatic cells interfollicular stalk cells enrichment_ubiquitous oocyte post follicle cells ant follicle cells |
| stage8 |  s
 s
 s
 s
 s | somatic cells cytoplasmic foci germline cells_ubiquitous oocyte post follicle cells ant follicle cells |
| stage9 |  s
 s
 s
 s
 s | follicle cells follicle cells_ubiquitous somatic cells germline cells_ubiquitous |
| stage10 |  s
 s
 s
 s
 s
 s | follicle cells somatic cells follicle cells_ubiquitous germline cells_ubiquitous |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Localized Exclusionary patterns Embryonic localization patterns Expressed Yolk cortex exclusion Annotated by Eric Medium expression (21-40ms exp) Stage 1-3 Maternal |
| stage4-5 | 
 | Localized Zygotic Subcellular localization patterns Degraded partially stage 4 Stage 4-5 Subset blastoderm nuclei Local terms for zyg transcripts Pole cell exclusion vent blastoderm nuclei Nuclei-associated localization Intranuclear accumulation Perinuclear subset of nuclei Exclusionary patterns Perinuclear around blastoderm nuclei Embryonic localization patterns Degraded completely stage 5 Degradation maternal transcripts Accumlation in subset nuclei Accumlation entire nucleus Blastoderm nuclei Expressed Perinuclear localization Apical exclusion Degraded post blastoderm nuclei Maternal |
| stage6-7 | 
 | post blastoderm nuclei Nuclei-associated localization vent blastoderm nuclei Subset blastoderm nuclei Accumlation entire nucleus Blastoderm nuclei Local terms for zyg transcripts Expressed Subcellular localization patterns Accumlation in subset nuclei Localized Intranuclear accumulation Stage 6-7 Zygotic |
| stage8-9 | 
 | Accumlation in subset nuclei Subcellular localization patterns Zygotic Localized Intranuclear accumulation Stage 8-9 Nuclei-associated localization Local terms for zyg transcripts Expressed Blastoderm nuclei Accumlation entire nucleus Subset blastoderm nuclei Segmented pattern |
| stage10- | 
 | Brain CNS Stage 10- Expressed Head Blastoderm nuclei Zygotic Localized Sensory sys Subcellular localization patterns vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | gap list_4-6:specific faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap list_7-8:specific vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||