Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | post follicle cells enrichment_ubiquitous interfollicular stalk cells oocyte somatic cells ant follicle cells |
| stage8 |  s
 s
 s
 s
 s | germline cells_ubiquitous cytoplasmic foci post follicle cells ant follicle cells somatic cells oocyte |
| stage9 |  s
 s
 s
 s
 s | germline cells_ubiquitous follicle cells_ubiquitous follicle cells somatic cells |
| stage10 |  s
 s
 s
 s
 s
 s | germline cells_ubiquitous follicle cells_ubiquitous follicle cells somatic cells |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Expressed Yolk cortex exclusion Exclusionary patterns Embryonic localization patterns Medium expression (21-40ms exp) Localized Annotated by Eric Stage 1-3 Maternal |
| stage4-5 | 
 | Degraded partially stage 4 Pole cell exclusion Degraded Accumlation entire nucleus Perinuclear around blastoderm nuclei post blastoderm nuclei Expressed Subcellular localization patterns Apical exclusion Degraded completely stage 5 Zygotic Intranuclear accumulation Nuclei-associated localization Embryonic localization patterns Perinuclear localization Degradation maternal transcripts Local terms for zyg transcripts Accumlation in subset nuclei Blastoderm nuclei Subset blastoderm nuclei Localized Stage 4-5 Exclusionary patterns Perinuclear subset of nuclei vent blastoderm nuclei Maternal |
| stage6-7 | 
 | Zygotic vent blastoderm nuclei Expressed Subcellular localization patterns Localized Subset blastoderm nuclei Stage 6-7 post blastoderm nuclei Local terms for zyg transcripts Blastoderm nuclei Accumlation in subset nuclei Intranuclear accumulation Accumlation entire nucleus Nuclei-associated localization |
| stage8-9 | 
 | Subcellular localization patterns Expressed Zygotic Stage 8-9 Segmented pattern Accumlation entire nucleus Intranuclear accumulation Nuclei-associated localization Subset blastoderm nuclei Localized Accumlation in subset nuclei Local terms for zyg transcripts Blastoderm nuclei |
| stage10- | 
 | Sensory sys Blastoderm nuclei Localized Stage 10- CNS Subcellular localization patterns Expressed Brain Head Zygotic vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | gap list_4-6:specific faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap list_7-8:specific vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | faint ubiquitous gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||