Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | post follicle cells enrichment_ubiquitous interfollicular stalk cells oocyte somatic cells ant follicle cells |
| stage8 |  s
 s
 s
 s
 s | post follicle cells germline cells_ubiquitous cytoplasmic foci ant follicle cells oocyte somatic cells |
| stage9 |  s
 s
 s
 s
 s | somatic cells follicle cells follicle cells_ubiquitous germline cells_ubiquitous |
| stage10 |  s
 s
 s
 s
 s
 s | follicle cells somatic cells follicle cells_ubiquitous germline cells_ubiquitous |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Yolk cortex exclusion Embryonic localization patterns Expressed Stage 1-3 Annotated by Eric Localized Exclusionary patterns Medium expression (21-40ms exp) Maternal |
| stage4-5 | 
 | Pole cell exclusion Degraded partially stage 4 Subcellular localization patterns Accumlation in subset nuclei Intranuclear accumulation Local terms for zyg transcripts Apical exclusion Expressed Degradation maternal transcripts Perinuclear subset of nuclei Zygotic Subset blastoderm nuclei Degraded Localized Exclusionary patterns post blastoderm nuclei Degraded completely stage 5 Stage 4-5 Perinuclear localization Blastoderm nuclei Nuclei-associated localization Embryonic localization patterns Accumlation entire nucleus Perinuclear around blastoderm nuclei vent blastoderm nuclei Maternal |
| stage6-7 | 
 | Localized post blastoderm nuclei Subcellular localization patterns Nuclei-associated localization Stage 6-7 Subset blastoderm nuclei vent blastoderm nuclei Accumlation entire nucleus Zygotic Local terms for zyg transcripts Accumlation in subset nuclei Intranuclear accumulation Blastoderm nuclei Expressed |
| stage8-9 | 
 | Subcellular localization patterns Localized Segmented pattern Blastoderm nuclei Expressed Local terms for zyg transcripts Intranuclear accumulation Accumlation in subset nuclei Subset blastoderm nuclei Stage 8-9 Accumlation entire nucleus Zygotic Nuclei-associated localization |
| stage10- | 
 | CNS Head Brain Localized Subcellular localization patterns Zygotic Expressed Blastoderm nuclei Stage 10- Sensory sys vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | list_4-6:specific gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap vent nerve cord A list_7-8:specific vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||