Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | interfollicular stalk cells somatic cells ant follicle cells post follicle cells oocyte enrichment_ubiquitous |
| stage8 |  s
 s
 s
 s
 s | somatic cells ant follicle cells germline cells_ubiquitous oocyte post follicle cells cytoplasmic foci |
| stage9 |  s
 s
 s
 s
 s | follicle cells follicle cells_ubiquitous somatic cells germline cells_ubiquitous |
| stage10 |  s
 s
 s
 s
 s
 s | follicle cells_ubiquitous follicle cells germline cells_ubiquitous somatic cells |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Localized Medium expression (21-40ms exp) Annotated by Eric Stage 1-3 Embryonic localization patterns Yolk cortex exclusion Exclusionary patterns Expressed Maternal |
| stage4-5 | 
 | Embryonic localization patterns Intranuclear accumulation Local terms for zyg transcripts Perinuclear subset of nuclei Apical exclusion Perinuclear localization Degradation maternal transcripts Subcellular localization patterns Perinuclear around blastoderm nuclei Expressed Exclusionary patterns Accumlation in subset nuclei vent blastoderm nuclei Degraded Zygotic post blastoderm nuclei Blastoderm nuclei Accumlation entire nucleus Nuclei-associated localization Localized Degraded partially stage 4 Stage 4-5 Pole cell exclusion Degraded completely stage 5 Subset blastoderm nuclei Maternal |
| stage6-7 | 
 | post blastoderm nuclei Stage 6-7 Intranuclear accumulation Blastoderm nuclei Local terms for zyg transcripts Accumlation entire nucleus Nuclei-associated localization Localized Subcellular localization patterns Expressed Accumlation in subset nuclei vent blastoderm nuclei Zygotic Subset blastoderm nuclei |
| stage8-9 | 
 | Subset blastoderm nuclei Zygotic Accumlation in subset nuclei Segmented pattern Expressed Subcellular localization patterns Localized Nuclei-associated localization Accumlation entire nucleus Stage 8-9 Local terms for zyg transcripts Blastoderm nuclei Intranuclear accumulation |
| stage10- | 
 | Zygotic CNS Subcellular localization patterns Sensory sys Expressed Stage 10- Localized Brain Blastoderm nuclei Head vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | gap faint ubiquitous list_4-6:specific vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap list_7-8:specific vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | faint ubiquitous gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||