Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | enrichment_ubiquitous ant follicle cells oocyte post follicle cells somatic cells interfollicular stalk cells |
| stage8 |  s
 s
 s
 s
 s | post follicle cells germline cells_ubiquitous somatic cells ant follicle cells oocyte cytoplasmic foci |
| stage9 |  s
 s
 s
 s
 s | germline cells_ubiquitous somatic cells follicle cells_ubiquitous follicle cells |
| stage10 |  s
 s
 s
 s
 s
 s | follicle cells_ubiquitous follicle cells somatic cells germline cells_ubiquitous |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Expressed Exclusionary patterns Medium expression (21-40ms exp) Annotated by Eric Stage 1-3 Localized Yolk cortex exclusion Embryonic localization patterns Maternal |
| stage4-5 | 
 | Degraded Zygotic Expressed Embryonic localization patterns vent blastoderm nuclei Degradation maternal transcripts Stage 4-5 Apical exclusion Subcellular localization patterns Exclusionary patterns Blastoderm nuclei Perinuclear subset of nuclei Degraded completely stage 5 Accumlation in subset nuclei Subset blastoderm nuclei Nuclei-associated localization Pole cell exclusion Degraded partially stage 4 Intranuclear accumulation Accumlation entire nucleus Perinuclear around blastoderm nuclei Perinuclear localization Localized post blastoderm nuclei Local terms for zyg transcripts Maternal |
| stage6-7 | 
 | Accumlation in subset nuclei Zygotic Expressed Intranuclear accumulation Subset blastoderm nuclei Nuclei-associated localization Subcellular localization patterns Stage 6-7 vent blastoderm nuclei Accumlation entire nucleus Blastoderm nuclei Local terms for zyg transcripts Localized post blastoderm nuclei |
| stage8-9 | 
 | Intranuclear accumulation Segmented pattern Subset blastoderm nuclei Nuclei-associated localization Accumlation in subset nuclei Expressed Zygotic Blastoderm nuclei Local terms for zyg transcripts Localized Subcellular localization patterns Stage 8-9 Accumlation entire nucleus |
| stage10- | 
 | Localized Brain Blastoderm nuclei Subcellular localization patterns CNS Sensory sys Stage 10- Head Zygotic Expressed vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | list_4-6:specific gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A list_7-8:specific gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||