Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | ant follicle cells post follicle cells somatic cells interfollicular stalk cells oocyte enrichment_ubiquitous |
| stage8 |  s
 s
 s
 s
 s | somatic cells post follicle cells ant follicle cells cytoplasmic foci germline cells_ubiquitous oocyte |
| stage9 |  s
 s
 s
 s
 s | follicle cells_ubiquitous somatic cells germline cells_ubiquitous follicle cells |
| stage10 |  s
 s
 s
 s
 s
 s | follicle cells_ubiquitous somatic cells follicle cells germline cells_ubiquitous |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Expressed Localized Stage 1-3 Annotated by Eric Exclusionary patterns Yolk cortex exclusion Medium expression (21-40ms exp) Embryonic localization patterns Maternal |
| stage4-5 | 
 | Subset blastoderm nuclei Zygotic Stage 4-5 Blastoderm nuclei Degraded partially stage 4 Accumlation in subset nuclei Degradation maternal transcripts Expressed Perinuclear around blastoderm nuclei Degraded completely stage 5 Nuclei-associated localization Exclusionary patterns Intranuclear accumulation Apical exclusion Pole cell exclusion Local terms for zyg transcripts Embryonic localization patterns Perinuclear localization vent blastoderm nuclei Accumlation entire nucleus Subcellular localization patterns Localized post blastoderm nuclei Degraded Perinuclear subset of nuclei Maternal |
| stage6-7 | 
 | Zygotic Blastoderm nuclei Local terms for zyg transcripts Accumlation in subset nuclei Intranuclear accumulation Subset blastoderm nuclei post blastoderm nuclei Stage 6-7 Expressed vent blastoderm nuclei Accumlation entire nucleus Subcellular localization patterns Nuclei-associated localization Localized |
| stage8-9 | 
 | Expressed Accumlation entire nucleus Segmented pattern Subcellular localization patterns Nuclei-associated localization Localized Intranuclear accumulation Subset blastoderm nuclei Zygotic Local terms for zyg transcripts Blastoderm nuclei Accumlation in subset nuclei Stage 8-9 |
| stage10- | 
 | CNS Sensory sys Subcellular localization patterns Localized Expressed Head Stage 10- Brain Zygotic Blastoderm nuclei vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | gap list_4-6:specific faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap list_7-8:specific vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||