Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | ant follicle cells interfollicular stalk cells post follicle cells somatic cells enrichment_ubiquitous oocyte |
| stage8 |  s
 s
 s
 s
 s | post follicle cells somatic cells germline cells_ubiquitous oocyte cytoplasmic foci ant follicle cells |
| stage9 |  s
 s
 s
 s
 s | follicle cells_ubiquitous follicle cells germline cells_ubiquitous somatic cells |
| stage10 |  s
 s
 s
 s
 s
 s | follicle cells_ubiquitous follicle cells germline cells_ubiquitous somatic cells |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Expressed Medium expression (21-40ms exp) Embryonic localization patterns Annotated by Eric Localized Stage 1-3 Yolk cortex exclusion Exclusionary patterns Maternal |
| stage4-5 | 
 | Zygotic Accumlation entire nucleus Embryonic localization patterns Intranuclear accumulation post blastoderm nuclei Expressed Degraded partially stage 4 Perinuclear around blastoderm nuclei Stage 4-5 Perinuclear subset of nuclei Blastoderm nuclei Degradation maternal transcripts Pole cell exclusion Local terms for zyg transcripts Subcellular localization patterns Localized vent blastoderm nuclei Perinuclear localization Exclusionary patterns Degraded Accumlation in subset nuclei Apical exclusion Subset blastoderm nuclei Degraded completely stage 5 Nuclei-associated localization Maternal |
| stage6-7 | 
 | Zygotic Blastoderm nuclei Local terms for zyg transcripts Localized Subcellular localization patterns Accumlation entire nucleus Intranuclear accumulation vent blastoderm nuclei post blastoderm nuclei Expressed Stage 6-7 Accumlation in subset nuclei Subset blastoderm nuclei Nuclei-associated localization |
| stage8-9 | 
 | Stage 8-9 Intranuclear accumulation Expressed Blastoderm nuclei Zygotic Local terms for zyg transcripts Subcellular localization patterns Accumlation entire nucleus Localized Accumlation in subset nuclei Segmented pattern Subset blastoderm nuclei Nuclei-associated localization |
| stage10- | 
 | Brain CNS Sensory sys Stage 10- Head Expressed Blastoderm nuclei Zygotic Subcellular localization patterns Localized vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | faint ubiquitous list_4-6:specific gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | list_7-8:specific gap vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||