Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | interfollicular stalk cells somatic cells post follicle cells ant follicle cells enrichment_ubiquitous oocyte |
| stage8 |  s
 s
 s
 s
 s | cytoplasmic foci oocyte germline cells_ubiquitous somatic cells ant follicle cells post follicle cells |
| stage9 |  s
 s
 s
 s
 s | follicle cells germline cells_ubiquitous follicle cells_ubiquitous somatic cells |
| stage10 |  s
 s
 s
 s
 s
 s | follicle cells germline cells_ubiquitous somatic cells follicle cells_ubiquitous |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Medium expression (21-40ms exp) Localized Stage 1-3 Expressed Embryonic localization patterns Annotated by Eric Exclusionary patterns Yolk cortex exclusion Maternal |
| stage4-5 | 
 | Apical exclusion Expressed Local terms for zyg transcripts Perinuclear subset of nuclei Blastoderm nuclei vent blastoderm nuclei Degraded partially stage 4 Accumlation entire nucleus Perinuclear localization Intranuclear accumulation Pole cell exclusion Exclusionary patterns Stage 4-5 Degradation maternal transcripts Zygotic Subcellular localization patterns Degraded completely stage 5 Degraded Accumlation in subset nuclei Nuclei-associated localization Localized Subset blastoderm nuclei post blastoderm nuclei Embryonic localization patterns Perinuclear around blastoderm nuclei Maternal |
| stage6-7 | 
 | Blastoderm nuclei Local terms for zyg transcripts Expressed Subcellular localization patterns Accumlation entire nucleus Localized Stage 6-7 Nuclei-associated localization Accumlation in subset nuclei vent blastoderm nuclei post blastoderm nuclei Intranuclear accumulation Subset blastoderm nuclei Zygotic |
| stage8-9 | 
 | Zygotic Segmented pattern Subset blastoderm nuclei Intranuclear accumulation Nuclei-associated localization Accumlation in subset nuclei Localized Stage 8-9 Accumlation entire nucleus Subcellular localization patterns Expressed Blastoderm nuclei Local terms for zyg transcripts |
| stage10- | 
 | Localized Sensory sys Subcellular localization patterns Brain Expressed Blastoderm nuclei Zygotic Stage 10- Head CNS vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | gap faint ubiquitous list_4-6:specific vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | list_7-8:specific vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||