Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | post follicle cells somatic cells enrichment_ubiquitous interfollicular stalk cells oocyte ant follicle cells |
| stage8 |  s
 s
 s
 s
 s | germline cells_ubiquitous somatic cells post follicle cells cytoplasmic foci ant follicle cells oocyte |
| stage9 |  s
 s
 s
 s
 s | follicle cells follicle cells_ubiquitous somatic cells germline cells_ubiquitous |
| stage10 |  s
 s
 s
 s
 s
 s | follicle cells_ubiquitous follicle cells germline cells_ubiquitous somatic cells |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Expressed Localized Embryonic localization patterns Exclusionary patterns Medium expression (21-40ms exp) Stage 1-3 Annotated by Eric Yolk cortex exclusion Maternal |
| stage4-5 | 
 | Subset blastoderm nuclei Apical exclusion Degraded completely stage 5 Perinuclear subset of nuclei Degraded Exclusionary patterns Intranuclear accumulation Accumlation in subset nuclei Localized Perinuclear localization Stage 4-5 Degraded partially stage 4 Accumlation entire nucleus vent blastoderm nuclei post blastoderm nuclei Embryonic localization patterns Degradation maternal transcripts Zygotic Perinuclear around blastoderm nuclei Pole cell exclusion Expressed Local terms for zyg transcripts Nuclei-associated localization Subcellular localization patterns Blastoderm nuclei Maternal |
| stage6-7 | 
 | Intranuclear accumulation Zygotic post blastoderm nuclei Blastoderm nuclei Local terms for zyg transcripts Nuclei-associated localization Localized Subcellular localization patterns Stage 6-7 Expressed Accumlation in subset nuclei Subset blastoderm nuclei vent blastoderm nuclei Accumlation entire nucleus |
| stage8-9 | 
 | Accumlation entire nucleus Segmented pattern Stage 8-9 Subset blastoderm nuclei Nuclei-associated localization Local terms for zyg transcripts Subcellular localization patterns Localized Blastoderm nuclei Accumlation in subset nuclei Expressed Zygotic Intranuclear accumulation |
| stage10- | 
 | Sensory sys Stage 10- Head Zygotic CNS Expressed Brain Localized Subcellular localization patterns Blastoderm nuclei vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | gap list_4-6:specific faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap list_7-8:specific vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||