Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | ant follicle cells post follicle cells somatic cells interfollicular stalk cells enrichment_ubiquitous oocyte |
| stage8 |  s
 s
 s
 s
 s | post follicle cells cytoplasmic foci ant follicle cells germline cells_ubiquitous oocyte somatic cells |
| stage9 |  s
 s
 s
 s
 s | germline cells_ubiquitous follicle cells_ubiquitous somatic cells follicle cells |
| stage10 |  s
 s
 s
 s
 s
 s | follicle cells_ubiquitous germline cells_ubiquitous follicle cells somatic cells |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Exclusionary patterns Expressed Annotated by Eric Medium expression (21-40ms exp) Embryonic localization patterns Localized Stage 1-3 Yolk cortex exclusion Maternal |
| stage4-5 | 
 | Intranuclear accumulation Accumlation in subset nuclei Zygotic post blastoderm nuclei Perinuclear around blastoderm nuclei Exclusionary patterns Apical exclusion Subcellular localization patterns Perinuclear localization Degraded Degradation maternal transcripts Blastoderm nuclei Embryonic localization patterns Subset blastoderm nuclei Nuclei-associated localization Expressed Degraded completely stage 5 Local terms for zyg transcripts Accumlation entire nucleus Degraded partially stage 4 Stage 4-5 Perinuclear subset of nuclei vent blastoderm nuclei Localized Pole cell exclusion Maternal |
| stage6-7 | 
 | Blastoderm nuclei Localized Stage 6-7 vent blastoderm nuclei Local terms for zyg transcripts Subcellular localization patterns Accumlation entire nucleus Accumlation in subset nuclei Zygotic Intranuclear accumulation Expressed Nuclei-associated localization post blastoderm nuclei Subset blastoderm nuclei |
| stage8-9 | 
 | Local terms for zyg transcripts Accumlation entire nucleus Stage 8-9 Subcellular localization patterns Intranuclear accumulation Zygotic Accumlation in subset nuclei Nuclei-associated localization Subset blastoderm nuclei Expressed Localized Blastoderm nuclei Segmented pattern |
| stage10- | 
 | Subcellular localization patterns Stage 10- Expressed Sensory sys Brain Zygotic Head Localized Blastoderm nuclei CNS vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | list_4-6:specific faint ubiquitous gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap vent nerve cord A list_7-8:specific vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | faint ubiquitous gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||