Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | enrichment_ubiquitous post follicle cells interfollicular stalk cells somatic cells ant follicle cells oocyte |
| stage8 |  s
 s
 s
 s
 s | somatic cells germline cells_ubiquitous oocyte ant follicle cells cytoplasmic foci post follicle cells |
| stage9 |  s
 s
 s
 s
 s | somatic cells germline cells_ubiquitous follicle cells_ubiquitous follicle cells |
| stage10 |  s
 s
 s
 s
 s
 s | somatic cells germline cells_ubiquitous follicle cells_ubiquitous follicle cells |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Medium expression (21-40ms exp) Embryonic localization patterns Yolk cortex exclusion Stage 1-3 Localized Annotated by Eric Expressed Exclusionary patterns Maternal |
| stage4-5 | 
 | Accumlation entire nucleus Subcellular localization patterns Degraded partially stage 4 Perinuclear localization Accumlation in subset nuclei Degraded completely stage 5 Degradation maternal transcripts Embryonic localization patterns Stage 4-5 Nuclei-associated localization Expressed Local terms for zyg transcripts Intranuclear accumulation Degraded Localized post blastoderm nuclei Apical exclusion Perinuclear around blastoderm nuclei Blastoderm nuclei Zygotic Subset blastoderm nuclei Exclusionary patterns vent blastoderm nuclei Perinuclear subset of nuclei Pole cell exclusion Maternal |
| stage6-7 | 
 | Local terms for zyg transcripts Expressed Intranuclear accumulation Subset blastoderm nuclei Stage 6-7 Nuclei-associated localization vent blastoderm nuclei Localized Accumlation in subset nuclei Accumlation entire nucleus post blastoderm nuclei Subcellular localization patterns Zygotic Blastoderm nuclei |
| stage8-9 | 
 | Segmented pattern Blastoderm nuclei Zygotic Accumlation entire nucleus Subcellular localization patterns Stage 8-9 Accumlation in subset nuclei Localized Nuclei-associated localization Expressed Local terms for zyg transcripts Subset blastoderm nuclei Intranuclear accumulation |
| stage10- | 
 | Expressed CNS Localized Brain Head Subcellular localization patterns Sensory sys Stage 10- Zygotic Blastoderm nuclei vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | list_4-6:specific faint ubiquitous gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | list_7-8:specific vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||