Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | post follicle cells somatic cells enrichment_ubiquitous oocyte ant follicle cells interfollicular stalk cells |
| stage8 |  s
 s
 s
 s
 s | oocyte cytoplasmic foci ant follicle cells post follicle cells somatic cells germline cells_ubiquitous |
| stage9 |  s
 s
 s
 s
 s | follicle cells germline cells_ubiquitous follicle cells_ubiquitous somatic cells |
| stage10 |  s
 s
 s
 s
 s
 s | follicle cells germline cells_ubiquitous somatic cells follicle cells_ubiquitous |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Annotated by Eric Localized Medium expression (21-40ms exp) Yolk cortex exclusion Exclusionary patterns Expressed Embryonic localization patterns Stage 1-3 Maternal |
| stage4-5 | 
 | post blastoderm nuclei Degraded completely stage 5 Degraded partially stage 4 vent blastoderm nuclei Nuclei-associated localization Blastoderm nuclei Pole cell exclusion Accumlation in subset nuclei Perinuclear localization Apical exclusion Subcellular localization patterns Localized Accumlation entire nucleus Degraded Local terms for zyg transcripts Subset blastoderm nuclei Intranuclear accumulation Embryonic localization patterns Perinuclear subset of nuclei Exclusionary patterns Perinuclear around blastoderm nuclei Expressed Degradation maternal transcripts Stage 4-5 Zygotic Maternal |
| stage6-7 | 
 | Expressed Localized Zygotic Subcellular localization patterns Intranuclear accumulation Local terms for zyg transcripts Subset blastoderm nuclei Stage 6-7 post blastoderm nuclei Accumlation entire nucleus Accumlation in subset nuclei Blastoderm nuclei vent blastoderm nuclei Nuclei-associated localization |
| stage8-9 | 
 | Localized Zygotic Stage 8-9 Subcellular localization patterns Expressed Accumlation in subset nuclei Blastoderm nuclei Nuclei-associated localization Local terms for zyg transcripts Subset blastoderm nuclei Intranuclear accumulation Segmented pattern Accumlation entire nucleus |
| stage10- | 
 | Sensory sys Blastoderm nuclei CNS Head Expressed Brain Zygotic Localized Stage 10- Subcellular localization patterns vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | faint ubiquitous list_4-6:specific gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap list_7-8:specific vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||