Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | oocyte post follicle cells interfollicular stalk cells enrichment_ubiquitous ant follicle cells somatic cells |
| stage8 |  s
 s
 s
 s
 s | oocyte post follicle cells germline cells_ubiquitous cytoplasmic foci somatic cells ant follicle cells |
| stage9 |  s
 s
 s
 s
 s | somatic cells germline cells_ubiquitous follicle cells follicle cells_ubiquitous |
| stage10 |  s
 s
 s
 s
 s
 s | germline cells_ubiquitous follicle cells_ubiquitous follicle cells somatic cells |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Localized Embryonic localization patterns Medium expression (21-40ms exp) Exclusionary patterns Annotated by Eric Expressed Yolk cortex exclusion Stage 1-3 Maternal |
| stage4-5 | 
 | Embryonic localization patterns Perinuclear subset of nuclei vent blastoderm nuclei Apical exclusion Accumlation in subset nuclei Local terms for zyg transcripts Degraded partially stage 4 Zygotic Stage 4-5 Expressed Blastoderm nuclei Perinuclear around blastoderm nuclei Subset blastoderm nuclei Degraded Localized Exclusionary patterns Pole cell exclusion Degradation maternal transcripts Subcellular localization patterns Degraded completely stage 5 post blastoderm nuclei Nuclei-associated localization Intranuclear accumulation Perinuclear localization Accumlation entire nucleus Maternal |
| stage6-7 | 
 | Intranuclear accumulation Accumlation entire nucleus Blastoderm nuclei Subset blastoderm nuclei post blastoderm nuclei Nuclei-associated localization Expressed Subcellular localization patterns Zygotic Local terms for zyg transcripts Accumlation in subset nuclei Localized Stage 6-7 vent blastoderm nuclei |
| stage8-9 | 
 | Subcellular localization patterns Zygotic Nuclei-associated localization Expressed Subset blastoderm nuclei Blastoderm nuclei Stage 8-9 Accumlation entire nucleus Intranuclear accumulation Segmented pattern Localized Accumlation in subset nuclei Local terms for zyg transcripts |
| stage10- | 
 | Localized CNS Sensory sys Expressed Head Stage 10- Subcellular localization patterns Zygotic Brain Blastoderm nuclei vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | list_4-6:specific faint ubiquitous gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A list_7-8:specific gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||