Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | oocyte interfollicular stalk cells enrichment_ubiquitous somatic cells post follicle cells ant follicle cells |
| stage8 |  s
 s
 s
 s
 s | germline cells_ubiquitous oocyte cytoplasmic foci somatic cells post follicle cells ant follicle cells |
| stage9 |  s
 s
 s
 s
 s | somatic cells follicle cells_ubiquitous germline cells_ubiquitous follicle cells |
| stage10 |  s
 s
 s
 s
 s
 s | somatic cells follicle cells_ubiquitous germline cells_ubiquitous follicle cells |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Localized Embryonic localization patterns Stage 1-3 Exclusionary patterns Expressed Annotated by Eric Yolk cortex exclusion Medium expression (21-40ms exp) Maternal |
| stage4-5 | 
 | Degraded completely stage 5 Local terms for zyg transcripts Subset blastoderm nuclei Perinuclear localization Stage 4-5 Perinuclear subset of nuclei Apical exclusion Accumlation in subset nuclei Degraded partially stage 4 Blastoderm nuclei Degradation maternal transcripts Perinuclear around blastoderm nuclei Localized Expressed Degraded Intranuclear accumulation Accumlation entire nucleus Zygotic Nuclei-associated localization Subcellular localization patterns post blastoderm nuclei vent blastoderm nuclei Embryonic localization patterns Exclusionary patterns Pole cell exclusion Maternal |
| stage6-7 | 
 | Intranuclear accumulation Accumlation entire nucleus Subset blastoderm nuclei Local terms for zyg transcripts Zygotic Nuclei-associated localization post blastoderm nuclei Accumlation in subset nuclei vent blastoderm nuclei Subcellular localization patterns Stage 6-7 Blastoderm nuclei Expressed Localized |
| stage8-9 | 
 | Segmented pattern Nuclei-associated localization Intranuclear accumulation Accumlation entire nucleus Local terms for zyg transcripts Subset blastoderm nuclei Stage 8-9 Zygotic Expressed Localized Accumlation in subset nuclei Subcellular localization patterns Blastoderm nuclei |
| stage10- | 
 | Sensory sys Brain Zygotic Localized Expressed Blastoderm nuclei Head CNS Subcellular localization patterns Stage 10- vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | list_4-6:specific gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap vent nerve cord A list_7-8:specific vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||