Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | oocyte somatic cells ant follicle cells post follicle cells enrichment_ubiquitous interfollicular stalk cells |
| stage8 |  s
 s
 s
 s
 s | post follicle cells ant follicle cells somatic cells cytoplasmic foci oocyte germline cells_ubiquitous |
| stage9 |  s
 s
 s
 s
 s | follicle cells follicle cells_ubiquitous somatic cells germline cells_ubiquitous |
| stage10 |  s
 s
 s
 s
 s
 s | follicle cells follicle cells_ubiquitous somatic cells germline cells_ubiquitous |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Yolk cortex exclusion Medium expression (21-40ms exp) Stage 1-3 Expressed Localized Embryonic localization patterns Exclusionary patterns Annotated by Eric Maternal |
| stage4-5 | 
 | Accumlation entire nucleus Embryonic localization patterns Degraded completely stage 5 vent blastoderm nuclei Subset blastoderm nuclei Degradation maternal transcripts Perinuclear subset of nuclei Perinuclear around blastoderm nuclei Accumlation in subset nuclei Nuclei-associated localization Local terms for zyg transcripts post blastoderm nuclei Subcellular localization patterns Degraded partially stage 4 Localized Zygotic Perinuclear localization Exclusionary patterns Degraded Intranuclear accumulation Stage 4-5 Blastoderm nuclei Apical exclusion Pole cell exclusion Expressed Maternal |
| stage6-7 | 
 | Zygotic Accumlation entire nucleus Localized vent blastoderm nuclei Subset blastoderm nuclei Stage 6-7 Accumlation in subset nuclei Local terms for zyg transcripts post blastoderm nuclei Nuclei-associated localization Intranuclear accumulation Blastoderm nuclei Expressed Subcellular localization patterns |
| stage8-9 | 
 | Localized Accumlation entire nucleus Segmented pattern Zygotic Subset blastoderm nuclei Stage 8-9 Accumlation in subset nuclei Nuclei-associated localization Intranuclear accumulation Local terms for zyg transcripts Blastoderm nuclei Subcellular localization patterns Expressed |
| stage10- | 
 | Zygotic CNS Localized Head Brain Stage 10- Blastoderm nuclei Sensory sys Subcellular localization patterns Expressed vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | faint ubiquitous gap list_4-6:specific vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap list_7-8:specific vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | faint ubiquitous gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||