Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | enrichment_ubiquitous oocyte post follicle cells interfollicular stalk cells somatic cells ant follicle cells |
| stage8 |  s
 s
 s
 s
 s | germline cells_ubiquitous ant follicle cells somatic cells cytoplasmic foci oocyte post follicle cells |
| stage9 |  s
 s
 s
 s
 s | follicle cells germline cells_ubiquitous follicle cells_ubiquitous somatic cells |
| stage10 |  s
 s
 s
 s
 s
 s | germline cells_ubiquitous follicle cells_ubiquitous somatic cells follicle cells |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Medium expression (21-40ms exp) Stage 1-3 Localized Annotated by Eric Embryonic localization patterns Yolk cortex exclusion Exclusionary patterns Expressed Maternal |
| stage4-5 | 
 | Blastoderm nuclei Degradation maternal transcripts Accumlation in subset nuclei Perinuclear localization Degraded Subcellular localization patterns Expressed Embryonic localization patterns Intranuclear accumulation Localized Zygotic Pole cell exclusion vent blastoderm nuclei post blastoderm nuclei Nuclei-associated localization Degraded partially stage 4 Perinuclear around blastoderm nuclei Perinuclear subset of nuclei Stage 4-5 Exclusionary patterns Local terms for zyg transcripts Degraded completely stage 5 Apical exclusion Accumlation entire nucleus Subset blastoderm nuclei Maternal |
| stage6-7 | 
 | Zygotic Localized Intranuclear accumulation Subset blastoderm nuclei Accumlation entire nucleus Nuclei-associated localization vent blastoderm nuclei post blastoderm nuclei Stage 6-7 Accumlation in subset nuclei Blastoderm nuclei Subcellular localization patterns Expressed Local terms for zyg transcripts |
| stage8-9 | 
 | Accumlation in subset nuclei Blastoderm nuclei Stage 8-9 Subcellular localization patterns Local terms for zyg transcripts Expressed Localized Zygotic Intranuclear accumulation Subset blastoderm nuclei Accumlation entire nucleus Nuclei-associated localization Segmented pattern |
| stage10- | 
 | Subcellular localization patterns Expressed Brain Sensory sys Blastoderm nuclei Head Stage 10- CNS Localized Zygotic vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | faint ubiquitous list_4-6:specific gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A list_7-8:specific gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||