Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | enrichment_ubiquitous oocyte ant follicle cells somatic cells post follicle cells interfollicular stalk cells |
| stage8 |  s
 s
 s
 s
 s | somatic cells germline cells_ubiquitous post follicle cells oocyte cytoplasmic foci ant follicle cells |
| stage9 |  s
 s
 s
 s
 s | follicle cells follicle cells_ubiquitous somatic cells germline cells_ubiquitous |
| stage10 |  s
 s
 s
 s
 s
 s | germline cells_ubiquitous somatic cells follicle cells_ubiquitous follicle cells |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Localized Embryonic localization patterns Yolk cortex exclusion Stage 1-3 Medium expression (21-40ms exp) Annotated by Eric Exclusionary patterns Expressed Maternal |
| stage4-5 | 
 | Intranuclear accumulation Localized Pole cell exclusion vent blastoderm nuclei Degraded partially stage 4 Embryonic localization patterns Subcellular localization patterns Subset blastoderm nuclei Degraded completely stage 5 Accumlation entire nucleus Exclusionary patterns Accumlation in subset nuclei Perinuclear localization Perinuclear subset of nuclei Apical exclusion Degraded Blastoderm nuclei post blastoderm nuclei Perinuclear around blastoderm nuclei Zygotic Stage 4-5 Degradation maternal transcripts Expressed Nuclei-associated localization Local terms for zyg transcripts Maternal |
| stage6-7 | 
 | Intranuclear accumulation Stage 6-7 Localized Blastoderm nuclei vent blastoderm nuclei post blastoderm nuclei Subcellular localization patterns Subset blastoderm nuclei Zygotic Accumlation entire nucleus Accumlation in subset nuclei Nuclei-associated localization Expressed Local terms for zyg transcripts |
| stage8-9 | 
 | Subset blastoderm nuclei Zygotic Accumlation entire nucleus Nuclei-associated localization Accumlation in subset nuclei Expressed Local terms for zyg transcripts Segmented pattern Intranuclear accumulation Stage 8-9 Localized Blastoderm nuclei Subcellular localization patterns |
| stage10- | 
 | Sensory sys Expressed Head Zygotic Stage 10- Blastoderm nuclei Subcellular localization patterns Brain Localized CNS vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | list_4-6:specific gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap vent nerve cord A list_7-8:specific vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||