Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | interfollicular stalk cells ant follicle cells enrichment_ubiquitous oocyte post follicle cells somatic cells |
| stage8 |  s
 s
 s
 s
 s | somatic cells cytoplasmic foci post follicle cells ant follicle cells germline cells_ubiquitous oocyte |
| stage9 |  s
 s
 s
 s
 s | somatic cells germline cells_ubiquitous follicle cells_ubiquitous follicle cells |
| stage10 |  s
 s
 s
 s
 s
 s | germline cells_ubiquitous somatic cells follicle cells_ubiquitous follicle cells |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Stage 1-3 Localized Expressed Yolk cortex exclusion Exclusionary patterns Medium expression (21-40ms exp) Embryonic localization patterns Annotated by Eric Maternal |
| stage4-5 | 
 | Perinuclear subset of nuclei Zygotic Nuclei-associated localization Local terms for zyg transcripts vent blastoderm nuclei Intranuclear accumulation Expressed Stage 4-5 Degraded completely stage 5 Localized Subcellular localization patterns Accumlation in subset nuclei Blastoderm nuclei Pole cell exclusion Embryonic localization patterns post blastoderm nuclei Perinuclear around blastoderm nuclei Degraded Accumlation entire nucleus Exclusionary patterns Apical exclusion Subset blastoderm nuclei Degraded partially stage 4 Perinuclear localization Degradation maternal transcripts Maternal |
| stage6-7 | 
 | Accumlation in subset nuclei Subcellular localization patterns Localized Stage 6-7 Subset blastoderm nuclei Accumlation entire nucleus Expressed Intranuclear accumulation vent blastoderm nuclei Nuclei-associated localization Local terms for zyg transcripts post blastoderm nuclei Zygotic Blastoderm nuclei |
| stage8-9 | 
 | Nuclei-associated localization Local terms for zyg transcripts Stage 8-9 Zygotic Blastoderm nuclei Intranuclear accumulation Segmented pattern Subset blastoderm nuclei Accumlation entire nucleus Expressed Accumlation in subset nuclei Subcellular localization patterns Localized |
| stage10- | 
 | CNS Brain Stage 10- Blastoderm nuclei Zygotic Head Localized Subcellular localization patterns Sensory sys Expressed vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | faint ubiquitous gap list_4-6:specific vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap list_7-8:specific vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||