Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | post follicle cells enrichment_ubiquitous interfollicular stalk cells somatic cells ant follicle cells oocyte |
| stage8 |  s
 s
 s
 s
 s | ant follicle cells oocyte germline cells_ubiquitous cytoplasmic foci somatic cells post follicle cells |
| stage9 |  s
 s
 s
 s
 s | germline cells_ubiquitous follicle cells somatic cells follicle cells_ubiquitous |
| stage10 |  s
 s
 s
 s
 s
 s | follicle cells_ubiquitous follicle cells somatic cells germline cells_ubiquitous |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Yolk cortex exclusion Stage 1-3 Embryonic localization patterns Annotated by Eric Localized Exclusionary patterns Expressed Medium expression (21-40ms exp) Maternal |
| stage4-5 | 
 | Intranuclear accumulation Perinuclear around blastoderm nuclei post blastoderm nuclei vent blastoderm nuclei Accumlation entire nucleus Localized Embryonic localization patterns Zygotic Expressed Apical exclusion Perinuclear localization Local terms for zyg transcripts Degraded Subset blastoderm nuclei Nuclei-associated localization Accumlation in subset nuclei Degraded partially stage 4 Degraded completely stage 5 Stage 4-5 Subcellular localization patterns Exclusionary patterns Blastoderm nuclei Perinuclear subset of nuclei Degradation maternal transcripts Pole cell exclusion Maternal |
| stage6-7 | 
 | Subset blastoderm nuclei Nuclei-associated localization Intranuclear accumulation Accumlation in subset nuclei post blastoderm nuclei vent blastoderm nuclei Accumlation entire nucleus Stage 6-7 Localized Subcellular localization patterns Blastoderm nuclei Expressed Zygotic Local terms for zyg transcripts |
| stage8-9 | 
 | Local terms for zyg transcripts Blastoderm nuclei Zygotic Expressed Subcellular localization patterns Localized Accumlation entire nucleus Segmented pattern Stage 8-9 Accumlation in subset nuclei Nuclei-associated localization Intranuclear accumulation Subset blastoderm nuclei |
| stage10- | 
 | Sensory sys Head Brain Localized Subcellular localization patterns Blastoderm nuclei Zygotic Expressed Stage 10- CNS vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | list_4-6:specific gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap list_7-8:specific vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | faint ubiquitous gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||