Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | oocyte somatic cells enrichment_ubiquitous post follicle cells interfollicular stalk cells ant follicle cells |
| stage8 |  s
 s
 s
 s
 s | somatic cells oocyte post follicle cells ant follicle cells cytoplasmic foci germline cells_ubiquitous |
| stage9 |  s
 s
 s
 s
 s | somatic cells germline cells_ubiquitous follicle cells follicle cells_ubiquitous |
| stage10 |  s
 s
 s
 s
 s
 s | germline cells_ubiquitous follicle cells follicle cells_ubiquitous somatic cells |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Stage 1-3 Medium expression (21-40ms exp) Localized Expressed Exclusionary patterns Yolk cortex exclusion Embryonic localization patterns Annotated by Eric Maternal |
| stage4-5 | 
 | Accumlation entire nucleus Subcellular localization patterns Zygotic Degraded vent blastoderm nuclei Blastoderm nuclei Expressed Embryonic localization patterns Accumlation in subset nuclei Perinuclear around blastoderm nuclei Degraded completely stage 5 Intranuclear accumulation Subset blastoderm nuclei Local terms for zyg transcripts Perinuclear subset of nuclei Apical exclusion Degradation maternal transcripts Degraded partially stage 4 Localized Exclusionary patterns post blastoderm nuclei Pole cell exclusion Nuclei-associated localization Stage 4-5 Perinuclear localization Maternal |
| stage6-7 | 
 | Localized vent blastoderm nuclei Zygotic Subcellular localization patterns Accumlation entire nucleus Local terms for zyg transcripts Subset blastoderm nuclei Nuclei-associated localization Intranuclear accumulation post blastoderm nuclei Accumlation in subset nuclei Stage 6-7 Expressed Blastoderm nuclei |
| stage8-9 | 
 | Segmented pattern Local terms for zyg transcripts Subset blastoderm nuclei Intranuclear accumulation Nuclei-associated localization Accumlation in subset nuclei Blastoderm nuclei Expressed Localized Stage 8-9 Zygotic Subcellular localization patterns Accumlation entire nucleus |
| stage10- | 
 | Subcellular localization patterns Sensory sys Zygotic CNS Localized Blastoderm nuclei Stage 10- Expressed Head Brain vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | faint ubiquitous gap list_4-6:specific vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap list_7-8:specific vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||