Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | oocyte somatic cells post follicle cells interfollicular stalk cells ant follicle cells enrichment_ubiquitous |
| stage8 |  s
 s
 s
 s
 s | somatic cells post follicle cells cytoplasmic foci oocyte germline cells_ubiquitous ant follicle cells |
| stage9 |  s
 s
 s
 s
 s | somatic cells germline cells_ubiquitous follicle cells follicle cells_ubiquitous |
| stage10 |  s
 s
 s
 s
 s
 s | follicle cells follicle cells_ubiquitous germline cells_ubiquitous somatic cells |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Medium expression (21-40ms exp) Stage 1-3 Annotated by Eric Embryonic localization patterns Expressed Exclusionary patterns Localized Yolk cortex exclusion Maternal |
| stage4-5 | 
 | Blastoderm nuclei Apical exclusion Perinuclear subset of nuclei post blastoderm nuclei Degraded completely stage 5 Exclusionary patterns Localized Local terms for zyg transcripts Stage 4-5 Degradation maternal transcripts Expressed Degraded partially stage 4 Pole cell exclusion Degraded Zygotic Subset blastoderm nuclei vent blastoderm nuclei Embryonic localization patterns Nuclei-associated localization Perinuclear around blastoderm nuclei Accumlation in subset nuclei Subcellular localization patterns Intranuclear accumulation Perinuclear localization Accumlation entire nucleus Maternal |
| stage6-7 | 
 | Nuclei-associated localization vent blastoderm nuclei Expressed Subset blastoderm nuclei Accumlation entire nucleus Subcellular localization patterns Accumlation in subset nuclei Intranuclear accumulation Stage 6-7 Blastoderm nuclei Local terms for zyg transcripts Localized post blastoderm nuclei Zygotic |
| stage8-9 | 
 | Blastoderm nuclei Local terms for zyg transcripts Stage 8-9 Localized Zygotic Nuclei-associated localization Subset blastoderm nuclei Expressed Segmented pattern Accumlation entire nucleus Subcellular localization patterns Accumlation in subset nuclei Intranuclear accumulation |
| stage10- | 
 | Localized Head Zygotic Stage 10- CNS Blastoderm nuclei Subcellular localization patterns Brain Sensory sys Expressed vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | gap faint ubiquitous list_4-6:specific vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap vent nerve cord A list_7-8:specific vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | faint ubiquitous gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||