Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | enrichment_ubiquitous somatic cells ant follicle cells interfollicular stalk cells oocyte post follicle cells |
| stage8 |  s
 s
 s
 s
 s | ant follicle cells somatic cells post follicle cells cytoplasmic foci germline cells_ubiquitous oocyte |
| stage9 |  s
 s
 s
 s
 s | follicle cells_ubiquitous germline cells_ubiquitous somatic cells follicle cells |
| stage10 |  s
 s
 s
 s
 s
 s | somatic cells follicle cells follicle cells_ubiquitous germline cells_ubiquitous |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Medium expression (21-40ms exp) Embryonic localization patterns Stage 1-3 Localized Yolk cortex exclusion Expressed Annotated by Eric Exclusionary patterns Maternal |
| stage4-5 | 
 | Pole cell exclusion Subcellular localization patterns Blastoderm nuclei Exclusionary patterns Perinuclear around blastoderm nuclei Apical exclusion Accumlation in subset nuclei post blastoderm nuclei Degraded completely stage 5 Expressed Intranuclear accumulation Stage 4-5 Perinuclear subset of nuclei Degraded Local terms for zyg transcripts Degraded partially stage 4 vent blastoderm nuclei Embryonic localization patterns Accumlation entire nucleus Zygotic Perinuclear localization Localized Degradation maternal transcripts Nuclei-associated localization Subset blastoderm nuclei Maternal |
| stage6-7 | 
 | Accumlation in subset nuclei Localized vent blastoderm nuclei Accumlation entire nucleus Zygotic Nuclei-associated localization Subset blastoderm nuclei post blastoderm nuclei Expressed Intranuclear accumulation Subcellular localization patterns Local terms for zyg transcripts Blastoderm nuclei Stage 6-7 |
| stage8-9 | 
 | Local terms for zyg transcripts Blastoderm nuclei Expressed Intranuclear accumulation Subcellular localization patterns Segmented pattern Nuclei-associated localization Subset blastoderm nuclei Accumlation in subset nuclei Stage 8-9 Localized Accumlation entire nucleus Zygotic |
| stage10- | 
 | Localized Zygotic CNS Stage 10- Brain Subcellular localization patterns Expressed Sensory sys Blastoderm nuclei Head vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | faint ubiquitous list_4-6:specific gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | list_7-8:specific vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | faint ubiquitous gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||