Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | oocyte ant follicle cells somatic cells enrichment_ubiquitous post follicle cells interfollicular stalk cells |
| stage8 |  s
 s
 s
 s
 s | post follicle cells cytoplasmic foci oocyte germline cells_ubiquitous ant follicle cells somatic cells |
| stage9 |  s
 s
 s
 s
 s | follicle cells_ubiquitous follicle cells germline cells_ubiquitous somatic cells |
| stage10 |  s
 s
 s
 s
 s
 s | follicle cells_ubiquitous somatic cells follicle cells germline cells_ubiquitous |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Medium expression (21-40ms exp) Exclusionary patterns Annotated by Eric Stage 1-3 Yolk cortex exclusion Localized Embryonic localization patterns Expressed Maternal |
| stage4-5 | 
 | Intranuclear accumulation Nuclei-associated localization Stage 4-5 Localized Embryonic localization patterns Perinuclear localization vent blastoderm nuclei Perinuclear subset of nuclei Degraded Pole cell exclusion Accumlation in subset nuclei Expressed Zygotic Subcellular localization patterns Degraded partially stage 4 Degraded completely stage 5 Degradation maternal transcripts Subset blastoderm nuclei Blastoderm nuclei Apical exclusion Local terms for zyg transcripts Exclusionary patterns Accumlation entire nucleus post blastoderm nuclei Perinuclear around blastoderm nuclei Maternal |
| stage6-7 | 
 | Local terms for zyg transcripts Blastoderm nuclei vent blastoderm nuclei post blastoderm nuclei Accumlation in subset nuclei Accumlation entire nucleus Intranuclear accumulation Zygotic Subcellular localization patterns Expressed Stage 6-7 Nuclei-associated localization Localized Subset blastoderm nuclei |
| stage8-9 | 
 | Accumlation in subset nuclei Accumlation entire nucleus Segmented pattern Stage 8-9 Local terms for zyg transcripts Blastoderm nuclei Localized Subset blastoderm nuclei Nuclei-associated localization Intranuclear accumulation Subcellular localization patterns Zygotic Expressed |
| stage10- | 
 | Brain CNS Blastoderm nuclei Head Localized Sensory sys Subcellular localization patterns Zygotic Expressed Stage 10- vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | gap list_4-6:specific faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A list_7-8:specific gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||