Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | enrichment_ubiquitous post follicle cells ant follicle cells interfollicular stalk cells oocyte somatic cells |
| stage8 |  s
 s
 s
 s
 s | ant follicle cells somatic cells oocyte germline cells_ubiquitous cytoplasmic foci post follicle cells |
| stage9 |  s
 s
 s
 s
 s | germline cells_ubiquitous follicle cells follicle cells_ubiquitous somatic cells |
| stage10 |  s
 s
 s
 s
 s
 s | somatic cells follicle cells_ubiquitous follicle cells germline cells_ubiquitous |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Localized Medium expression (21-40ms exp) Expressed Embryonic localization patterns Exclusionary patterns Annotated by Eric Yolk cortex exclusion Stage 1-3 Maternal |
| stage4-5 | 
 | Stage 4-5 Degraded partially stage 4 Degraded completely stage 5 Blastoderm nuclei Intranuclear accumulation vent blastoderm nuclei Subset blastoderm nuclei Pole cell exclusion Nuclei-associated localization Zygotic Perinuclear subset of nuclei Embryonic localization patterns Degradation maternal transcripts Local terms for zyg transcripts Subcellular localization patterns Accumlation in subset nuclei Degraded Perinuclear around blastoderm nuclei Perinuclear localization Apical exclusion Exclusionary patterns post blastoderm nuclei Expressed Localized Accumlation entire nucleus Maternal |
| stage6-7 | 
 | Accumlation entire nucleus Localized Local terms for zyg transcripts Subcellular localization patterns Expressed post blastoderm nuclei Stage 6-7 Zygotic Subset blastoderm nuclei Nuclei-associated localization vent blastoderm nuclei Intranuclear accumulation Blastoderm nuclei Accumlation in subset nuclei |
| stage8-9 | 
 | Zygotic Nuclei-associated localization Subset blastoderm nuclei Blastoderm nuclei Intranuclear accumulation Accumlation in subset nuclei Local terms for zyg transcripts Expressed Subcellular localization patterns Accumlation entire nucleus Localized Segmented pattern Stage 8-9 |
| stage10- | 
 | Localized Subcellular localization patterns Expressed Sensory sys Stage 10- Head Zygotic Blastoderm nuclei CNS Brain vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | faint ubiquitous gap list_4-6:specific vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | list_7-8:specific gap vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||