Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | oocyte post follicle cells somatic cells enrichment_ubiquitous ant follicle cells interfollicular stalk cells |
| stage8 |  s
 s
 s
 s
 s | oocyte germline cells_ubiquitous somatic cells post follicle cells cytoplasmic foci ant follicle cells |
| stage9 |  s
 s
 s
 s
 s | follicle cells_ubiquitous germline cells_ubiquitous follicle cells somatic cells |
| stage10 |  s
 s
 s
 s
 s
 s | somatic cells follicle cells germline cells_ubiquitous follicle cells_ubiquitous |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Expressed Yolk cortex exclusion Localized Medium expression (21-40ms exp) Stage 1-3 Annotated by Eric Embryonic localization patterns Exclusionary patterns Maternal |
| stage4-5 | 
 | vent blastoderm nuclei Apical exclusion Perinuclear localization Embryonic localization patterns Nuclei-associated localization Subcellular localization patterns Accumlation entire nucleus Accumlation in subset nuclei Perinuclear around blastoderm nuclei Pole cell exclusion Degraded partially stage 4 Expressed Degraded post blastoderm nuclei Local terms for zyg transcripts Perinuclear subset of nuclei Blastoderm nuclei Stage 4-5 Exclusionary patterns Intranuclear accumulation Subset blastoderm nuclei Zygotic Localized Degraded completely stage 5 Degradation maternal transcripts Maternal |
| stage6-7 | 
 | Localized Zygotic Expressed Stage 6-7 Intranuclear accumulation Subset blastoderm nuclei Accumlation in subset nuclei Accumlation entire nucleus Subcellular localization patterns Nuclei-associated localization Blastoderm nuclei post blastoderm nuclei Local terms for zyg transcripts vent blastoderm nuclei |
| stage8-9 | 
 | Local terms for zyg transcripts Accumlation entire nucleus Subcellular localization patterns Nuclei-associated localization Blastoderm nuclei Intranuclear accumulation Subset blastoderm nuclei Accumlation in subset nuclei Localized Stage 8-9 Expressed Segmented pattern Zygotic |
| stage10- | 
 | Blastoderm nuclei Subcellular localization patterns Stage 10- Localized Head Sensory sys Zygotic Expressed Brain CNS vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | faint ubiquitous gap list_4-6:specific vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A list_7-8:specific gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||