Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | post follicle cells ant follicle cells oocyte somatic cells interfollicular stalk cells enrichment_ubiquitous |
| stage8 |  s
 s
 s
 s
 s | oocyte somatic cells germline cells_ubiquitous ant follicle cells post follicle cells cytoplasmic foci |
| stage9 |  s
 s
 s
 s
 s | germline cells_ubiquitous follicle cells_ubiquitous somatic cells follicle cells |
| stage10 |  s
 s
 s
 s
 s
 s | follicle cells_ubiquitous germline cells_ubiquitous somatic cells follicle cells |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Embryonic localization patterns Localized Yolk cortex exclusion Stage 1-3 Expressed Annotated by Eric Exclusionary patterns Medium expression (21-40ms exp) Maternal |
| stage4-5 | 
 | Accumlation in subset nuclei Perinuclear localization Perinuclear subset of nuclei Expressed Zygotic Degradation maternal transcripts Degraded partially stage 4 Pole cell exclusion Degraded Localized Apical exclusion Perinuclear around blastoderm nuclei Accumlation entire nucleus Exclusionary patterns Intranuclear accumulation Nuclei-associated localization Stage 4-5 Subcellular localization patterns Degraded completely stage 5 Blastoderm nuclei Subset blastoderm nuclei Local terms for zyg transcripts post blastoderm nuclei Embryonic localization patterns vent blastoderm nuclei Maternal |
| stage6-7 | 
 | Blastoderm nuclei Nuclei-associated localization Subcellular localization patterns Expressed Intranuclear accumulation Zygotic Accumlation in subset nuclei Accumlation entire nucleus Stage 6-7 Localized vent blastoderm nuclei Local terms for zyg transcripts Subset blastoderm nuclei post blastoderm nuclei |
| stage8-9 | 
 | Nuclei-associated localization Subcellular localization patterns Blastoderm nuclei Stage 8-9 Accumlation in subset nuclei Segmented pattern Expressed Zygotic Intranuclear accumulation Accumlation entire nucleus Subset blastoderm nuclei Local terms for zyg transcripts Localized |
| stage10- | 
 | Stage 10- CNS Localized Brain Subcellular localization patterns Head Blastoderm nuclei Sensory sys Expressed Zygotic vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | list_4-6:specific gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | list_7-8:specific gap vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | faint ubiquitous gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||