Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | post follicle cells ant follicle cells somatic cells enrichment_ubiquitous oocyte interfollicular stalk cells |
| stage8 |  s
 s
 s
 s
 s | cytoplasmic foci oocyte somatic cells ant follicle cells germline cells_ubiquitous post follicle cells |
| stage9 |  s
 s
 s
 s
 s | follicle cells_ubiquitous somatic cells germline cells_ubiquitous follicle cells |
| stage10 |  s
 s
 s
 s
 s
 s | follicle cells somatic cells follicle cells_ubiquitous germline cells_ubiquitous |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Localized Exclusionary patterns Yolk cortex exclusion Annotated by Eric Embryonic localization patterns Expressed Stage 1-3 Medium expression (21-40ms exp) Maternal |
| stage4-5 | 
 | Blastoderm nuclei Degraded completely stage 5 Local terms for zyg transcripts Pole cell exclusion Stage 4-5 Apical exclusion Intranuclear accumulation Perinuclear around blastoderm nuclei Degraded partially stage 4 Expressed Subcellular localization patterns Embryonic localization patterns vent blastoderm nuclei Perinuclear subset of nuclei Degraded Subset blastoderm nuclei Exclusionary patterns Degradation maternal transcripts post blastoderm nuclei Zygotic Localized Accumlation in subset nuclei Perinuclear localization Accumlation entire nucleus Nuclei-associated localization Maternal |
| stage6-7 | 
 | Expressed Subcellular localization patterns vent blastoderm nuclei Accumlation in subset nuclei Accumlation entire nucleus Nuclei-associated localization Stage 6-7 Subset blastoderm nuclei post blastoderm nuclei Localized Zygotic Intranuclear accumulation Blastoderm nuclei Local terms for zyg transcripts |
| stage8-9 | 
 | Nuclei-associated localization Accumlation entire nucleus Accumlation in subset nuclei Segmented pattern Subcellular localization patterns Expressed Stage 8-9 Local terms for zyg transcripts Blastoderm nuclei Zygotic Localized Intranuclear accumulation Subset blastoderm nuclei |
| stage10- | 
 | Localized Zygotic Head Brain CNS Blastoderm nuclei Subcellular localization patterns Stage 10- Expressed Sensory sys vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | faint ubiquitous list_4-6:specific gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap list_7-8:specific vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||