Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | ant follicle cells enrichment_ubiquitous post follicle cells oocyte somatic cells interfollicular stalk cells |
| stage8 |  s
 s
 s
 s
 s | somatic cells germline cells_ubiquitous post follicle cells oocyte cytoplasmic foci ant follicle cells |
| stage9 |  s
 s
 s
 s
 s | follicle cells germline cells_ubiquitous somatic cells follicle cells_ubiquitous |
| stage10 |  s
 s
 s
 s
 s
 s | follicle cells_ubiquitous somatic cells germline cells_ubiquitous follicle cells |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Medium expression (21-40ms exp) Annotated by Eric Localized Yolk cortex exclusion Exclusionary patterns Embryonic localization patterns Stage 1-3 Expressed Maternal |
| stage4-5 | 
 | Nuclei-associated localization Localized Degradation maternal transcripts Accumlation in subset nuclei Degraded partially stage 4 Local terms for zyg transcripts Subset blastoderm nuclei Perinuclear around blastoderm nuclei Intranuclear accumulation Blastoderm nuclei Embryonic localization patterns Exclusionary patterns Degraded Perinuclear localization Accumlation entire nucleus Stage 4-5 Perinuclear subset of nuclei Apical exclusion Subcellular localization patterns Expressed Zygotic post blastoderm nuclei Pole cell exclusion Degraded completely stage 5 vent blastoderm nuclei Maternal |
| stage6-7 | 
 | Accumlation in subset nuclei Nuclei-associated localization Accumlation entire nucleus Localized Stage 6-7 post blastoderm nuclei Intranuclear accumulation vent blastoderm nuclei Blastoderm nuclei Subcellular localization patterns Zygotic Expressed Subset blastoderm nuclei Local terms for zyg transcripts |
| stage8-9 | 
 | Blastoderm nuclei Intranuclear accumulation Stage 8-9 Local terms for zyg transcripts Segmented pattern Subset blastoderm nuclei Subcellular localization patterns Zygotic Expressed Accumlation in subset nuclei Accumlation entire nucleus Localized Nuclei-associated localization |
| stage10- | 
 | Subcellular localization patterns Sensory sys Expressed Zygotic Brain Blastoderm nuclei CNS Localized Head Stage 10- vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | faint ubiquitous gap list_4-6:specific vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap list_7-8:specific vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||