Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | post follicle cells oocyte enrichment_ubiquitous somatic cells interfollicular stalk cells ant follicle cells |
| stage8 |  s
 s
 s
 s
 s | oocyte post follicle cells germline cells_ubiquitous ant follicle cells cytoplasmic foci somatic cells |
| stage9 |  s
 s
 s
 s
 s | germline cells_ubiquitous follicle cells_ubiquitous follicle cells somatic cells |
| stage10 |  s
 s
 s
 s
 s
 s | somatic cells follicle cells germline cells_ubiquitous follicle cells_ubiquitous |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Stage 1-3 Expressed Medium expression (21-40ms exp) Yolk cortex exclusion Exclusionary patterns Localized Embryonic localization patterns Annotated by Eric Maternal |
| stage4-5 | 
 | vent blastoderm nuclei Zygotic Degraded Embryonic localization patterns Perinuclear subset of nuclei Local terms for zyg transcripts Nuclei-associated localization Localized Exclusionary patterns Expressed Degradation maternal transcripts Degraded completely stage 5 Accumlation in subset nuclei Perinuclear around blastoderm nuclei Blastoderm nuclei Apical exclusion Intranuclear accumulation Degraded partially stage 4 Subcellular localization patterns Subset blastoderm nuclei Perinuclear localization Pole cell exclusion post blastoderm nuclei Stage 4-5 Accumlation entire nucleus Maternal |
| stage6-7 | 
 | Nuclei-associated localization Subset blastoderm nuclei Local terms for zyg transcripts Subcellular localization patterns Intranuclear accumulation Localized post blastoderm nuclei Stage 6-7 Expressed Accumlation entire nucleus vent blastoderm nuclei Accumlation in subset nuclei Zygotic Blastoderm nuclei |
| stage8-9 | 
 | Expressed Accumlation entire nucleus Nuclei-associated localization Subset blastoderm nuclei Subcellular localization patterns Local terms for zyg transcripts Intranuclear accumulation Stage 8-9 Localized Zygotic Segmented pattern Blastoderm nuclei Accumlation in subset nuclei |
| stage10- | 
 | Subcellular localization patterns Head Localized Stage 10- Expressed Brain CNS Zygotic Sensory sys Blastoderm nuclei vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | list_4-6:specific faint ubiquitous gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | list_7-8:specific gap vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | faint ubiquitous gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||