Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | post follicle cells interfollicular stalk cells ant follicle cells enrichment_ubiquitous oocyte somatic cells |
| stage8 |  s
 s
 s
 s
 s | somatic cells germline cells_ubiquitous oocyte cytoplasmic foci ant follicle cells post follicle cells |
| stage9 |  s
 s
 s
 s
 s | follicle cells follicle cells_ubiquitous germline cells_ubiquitous somatic cells |
| stage10 |  s
 s
 s
 s
 s
 s | follicle cells germline cells_ubiquitous follicle cells_ubiquitous somatic cells |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Expressed Yolk cortex exclusion Embryonic localization patterns Localized Stage 1-3 Exclusionary patterns Annotated by Eric Medium expression (21-40ms exp) Maternal |
| stage4-5 | 
 | Degraded Local terms for zyg transcripts Perinuclear localization Apical exclusion Degraded completely stage 5 Embryonic localization patterns Degraded partially stage 4 Subcellular localization patterns Accumlation in subset nuclei Perinuclear around blastoderm nuclei Stage 4-5 Expressed Nuclei-associated localization post blastoderm nuclei Zygotic Accumlation entire nucleus Blastoderm nuclei Localized Pole cell exclusion vent blastoderm nuclei Perinuclear subset of nuclei Exclusionary patterns Intranuclear accumulation Subset blastoderm nuclei Degradation maternal transcripts Maternal |
| stage6-7 | 
 | Subset blastoderm nuclei Intranuclear accumulation Subcellular localization patterns Localized Accumlation in subset nuclei vent blastoderm nuclei Accumlation entire nucleus Blastoderm nuclei Local terms for zyg transcripts Expressed Stage 6-7 post blastoderm nuclei Zygotic Nuclei-associated localization |
| stage8-9 | 
 | Subset blastoderm nuclei Intranuclear accumulation Segmented pattern Stage 8-9 Subcellular localization patterns Accumlation in subset nuclei Localized Accumlation entire nucleus Blastoderm nuclei Expressed Local terms for zyg transcripts Zygotic Nuclei-associated localization |
| stage10- | 
 | Blastoderm nuclei Head CNS Brain Expressed Sensory sys Stage 10- Zygotic Subcellular localization patterns Localized vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | list_4-6:specific gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A list_7-8:specific gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||