Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | somatic cells enrichment_ubiquitous ant follicle cells interfollicular stalk cells oocyte post follicle cells |
| stage8 |  s
 s
 s
 s
 s | post follicle cells oocyte cytoplasmic foci ant follicle cells somatic cells germline cells_ubiquitous |
| stage9 |  s
 s
 s
 s
 s | germline cells_ubiquitous somatic cells follicle cells_ubiquitous follicle cells |
| stage10 |  s
 s
 s
 s
 s
 s | somatic cells germline cells_ubiquitous follicle cells follicle cells_ubiquitous |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Annotated by Eric Localized Stage 1-3 Medium expression (21-40ms exp) Yolk cortex exclusion Expressed Embryonic localization patterns Exclusionary patterns Maternal |
| stage4-5 | 
 | Localized Degradation maternal transcripts Zygotic Subcellular localization patterns Accumlation entire nucleus Stage 4-5 Apical exclusion Blastoderm nuclei vent blastoderm nuclei Local terms for zyg transcripts Exclusionary patterns Degraded partially stage 4 Perinuclear subset of nuclei Subset blastoderm nuclei Perinuclear around blastoderm nuclei Intranuclear accumulation Perinuclear localization Pole cell exclusion Expressed Nuclei-associated localization post blastoderm nuclei Embryonic localization patterns Accumlation in subset nuclei Degraded completely stage 5 Degraded Maternal |
| stage6-7 | 
 | Intranuclear accumulation Zygotic Stage 6-7 Subset blastoderm nuclei Localized Accumlation in subset nuclei vent blastoderm nuclei Nuclei-associated localization post blastoderm nuclei Blastoderm nuclei Local terms for zyg transcripts Subcellular localization patterns Accumlation entire nucleus Expressed |
| stage8-9 | 
 | Local terms for zyg transcripts Nuclei-associated localization Blastoderm nuclei Expressed Subcellular localization patterns Accumlation entire nucleus Accumlation in subset nuclei Segmented pattern Stage 8-9 Localized Zygotic Intranuclear accumulation Subset blastoderm nuclei |
| stage10- | 
 | Blastoderm nuclei Subcellular localization patterns Brain Head Expressed Zygotic Sensory sys Stage 10- Localized CNS vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | gap list_4-6:specific faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | list_7-8:specific vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||