Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | interfollicular stalk cells enrichment_ubiquitous ant follicle cells post follicle cells oocyte somatic cells |
| stage8 |  s
 s
 s
 s
 s | germline cells_ubiquitous oocyte cytoplasmic foci somatic cells ant follicle cells post follicle cells |
| stage9 |  s
 s
 s
 s
 s | follicle cells_ubiquitous germline cells_ubiquitous follicle cells somatic cells |
| stage10 |  s
 s
 s
 s
 s
 s | somatic cells follicle cells germline cells_ubiquitous follicle cells_ubiquitous |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Exclusionary patterns Localized Annotated by Eric Embryonic localization patterns Expressed Yolk cortex exclusion Medium expression (21-40ms exp) Stage 1-3 Maternal |
| stage4-5 | 
 | Perinuclear localization Blastoderm nuclei Degraded completely stage 5 Localized post blastoderm nuclei Degradation maternal transcripts Degraded partially stage 4 Apical exclusion Zygotic Embryonic localization patterns Subset blastoderm nuclei Nuclei-associated localization vent blastoderm nuclei Intranuclear accumulation Subcellular localization patterns Pole cell exclusion Degraded Exclusionary patterns Local terms for zyg transcripts Accumlation in subset nuclei Perinuclear subset of nuclei Perinuclear around blastoderm nuclei Expressed Stage 4-5 Accumlation entire nucleus Maternal |
| stage6-7 | 
 | Accumlation entire nucleus Zygotic Expressed post blastoderm nuclei Local terms for zyg transcripts Stage 6-7 Accumlation in subset nuclei Localized Nuclei-associated localization Intranuclear accumulation vent blastoderm nuclei Blastoderm nuclei Subcellular localization patterns Subset blastoderm nuclei |
| stage8-9 | 
 | Local terms for zyg transcripts Accumlation in subset nuclei Localized Nuclei-associated localization Intranuclear accumulation Blastoderm nuclei Subcellular localization patterns Subset blastoderm nuclei Accumlation entire nucleus Expressed Zygotic Segmented pattern Stage 8-9 |
| stage10- | 
 | Localized Stage 10- Head CNS Blastoderm nuclei Subcellular localization patterns Zygotic Expressed Sensory sys Brain vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | faint ubiquitous list_4-6:specific gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap vent nerve cord A list_7-8:specific vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||