Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | interfollicular stalk cells enrichment_ubiquitous somatic cells ant follicle cells post follicle cells oocyte |
| stage8 |  s
 s
 s
 s
 s | oocyte post follicle cells germline cells_ubiquitous cytoplasmic foci somatic cells ant follicle cells |
| stage9 |  s
 s
 s
 s
 s | somatic cells follicle cells_ubiquitous follicle cells germline cells_ubiquitous |
| stage10 |  s
 s
 s
 s
 s
 s | somatic cells follicle cells_ubiquitous follicle cells germline cells_ubiquitous |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Localized Exclusionary patterns Expressed Annotated by Eric Embryonic localization patterns Medium expression (21-40ms exp) Stage 1-3 Yolk cortex exclusion Maternal |
| stage4-5 | 
 | Blastoderm nuclei Nuclei-associated localization Degraded completely stage 5 vent blastoderm nuclei Degraded partially stage 4 Perinuclear around blastoderm nuclei Pole cell exclusion Intranuclear accumulation Accumlation entire nucleus Expressed Localized Perinuclear localization Accumlation in subset nuclei Degradation maternal transcripts Embryonic localization patterns Perinuclear subset of nuclei Stage 4-5 Degraded Apical exclusion Local terms for zyg transcripts Exclusionary patterns Subcellular localization patterns post blastoderm nuclei Zygotic Subset blastoderm nuclei Maternal |
| stage6-7 | 
 | Stage 6-7 Blastoderm nuclei Nuclei-associated localization vent blastoderm nuclei Local terms for zyg transcripts Accumlation entire nucleus Localized Intranuclear accumulation Expressed Subcellular localization patterns post blastoderm nuclei Accumlation in subset nuclei Zygotic Subset blastoderm nuclei |
| stage8-9 | 
 | Blastoderm nuclei Nuclei-associated localization Intranuclear accumulation Local terms for zyg transcripts Accumlation entire nucleus Subcellular localization patterns Localized Expressed Segmented pattern Accumlation in subset nuclei Zygotic Subset blastoderm nuclei Stage 8-9 |
| stage10- | 
 | Blastoderm nuclei CNS Brain Sensory sys Stage 10- Localized Subcellular localization patterns Expressed Head Zygotic vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | gap list_4-6:specific faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | list_7-8:specific gap vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | faint ubiquitous gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||