Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | enrichment_ubiquitous post follicle cells oocyte somatic cells ant follicle cells interfollicular stalk cells |
| stage8 |  s
 s
 s
 s
 s | ant follicle cells germline cells_ubiquitous cytoplasmic foci post follicle cells oocyte somatic cells |
| stage9 |  s
 s
 s
 s
 s | follicle cells somatic cells germline cells_ubiquitous follicle cells_ubiquitous |
| stage10 |  s
 s
 s
 s
 s
 s | follicle cells somatic cells germline cells_ubiquitous follicle cells_ubiquitous |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Annotated by Eric Stage 1-3 Expressed Medium expression (21-40ms exp) Localized Exclusionary patterns Embryonic localization patterns Yolk cortex exclusion Maternal |
| stage4-5 | 
 | Degradation maternal transcripts Degraded vent blastoderm nuclei Apical exclusion Perinuclear localization Nuclei-associated localization Intranuclear accumulation Localized Accumlation in subset nuclei Perinuclear subset of nuclei Accumlation entire nucleus Degraded partially stage 4 Subset blastoderm nuclei Blastoderm nuclei Stage 4-5 Perinuclear around blastoderm nuclei Zygotic Expressed Local terms for zyg transcripts Subcellular localization patterns Pole cell exclusion Exclusionary patterns Embryonic localization patterns Degraded completely stage 5 post blastoderm nuclei Maternal |
| stage6-7 | 
 | Accumlation entire nucleus post blastoderm nuclei Subset blastoderm nuclei Blastoderm nuclei Accumlation in subset nuclei Zygotic Stage 6-7 Nuclei-associated localization Expressed Subcellular localization patterns Local terms for zyg transcripts Intranuclear accumulation Localized vent blastoderm nuclei |
| stage8-9 | 
 | Segmented pattern Accumlation in subset nuclei Accumlation entire nucleus Subset blastoderm nuclei Blastoderm nuclei Stage 8-9 Local terms for zyg transcripts Subcellular localization patterns Intranuclear accumulation Localized Zygotic Expressed Nuclei-associated localization |
| stage10- | 
 | Brain Head Expressed Zygotic Localized Subcellular localization patterns CNS Stage 10- Blastoderm nuclei Sensory sys vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | faint ubiquitous list_4-6:specific gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | list_7-8:specific gap vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||