Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | post follicle cells ant follicle cells somatic cells oocyte interfollicular stalk cells enrichment_ubiquitous |
| stage8 |  s
 s
 s
 s
 s | cytoplasmic foci germline cells_ubiquitous somatic cells post follicle cells ant follicle cells oocyte |
| stage9 |  s
 s
 s
 s
 s | somatic cells germline cells_ubiquitous follicle cells follicle cells_ubiquitous |
| stage10 |  s
 s
 s
 s
 s
 s | follicle cells_ubiquitous follicle cells somatic cells germline cells_ubiquitous |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Localized Medium expression (21-40ms exp) Expressed Stage 1-3 Annotated by Eric Yolk cortex exclusion Embryonic localization patterns Exclusionary patterns Maternal |
| stage4-5 | 
 | Local terms for zyg transcripts Perinuclear around blastoderm nuclei Blastoderm nuclei Localized Degraded Apical exclusion post blastoderm nuclei Expressed Perinuclear localization vent blastoderm nuclei Embryonic localization patterns Pole cell exclusion Nuclei-associated localization Exclusionary patterns Subset blastoderm nuclei Stage 4-5 Degraded partially stage 4 Degraded completely stage 5 Accumlation in subset nuclei Accumlation entire nucleus Subcellular localization patterns Intranuclear accumulation Zygotic Degradation maternal transcripts Perinuclear subset of nuclei Maternal |
| stage6-7 | 
 | Subcellular localization patterns Accumlation entire nucleus Accumlation in subset nuclei post blastoderm nuclei Expressed Nuclei-associated localization vent blastoderm nuclei Intranuclear accumulation Zygotic Stage 6-7 Subset blastoderm nuclei Local terms for zyg transcripts Localized Blastoderm nuclei |
| stage8-9 | 
 | Subset blastoderm nuclei Nuclei-associated localization Zygotic Intranuclear accumulation Segmented pattern Accumlation entire nucleus Subcellular localization patterns Expressed Accumlation in subset nuclei Stage 8-9 Localized Blastoderm nuclei Local terms for zyg transcripts |
| stage10- | 
 | Zygotic CNS Subcellular localization patterns Expressed Stage 10- Brain Head Sensory sys Localized Blastoderm nuclei vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | gap faint ubiquitous list_4-6:specific vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | list_7-8:specific vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | faint ubiquitous gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||