Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | enrichment_ubiquitous oocyte ant follicle cells interfollicular stalk cells somatic cells post follicle cells |
| stage8 |  s
 s
 s
 s
 s | cytoplasmic foci oocyte ant follicle cells somatic cells germline cells_ubiquitous post follicle cells |
| stage9 |  s
 s
 s
 s
 s | follicle cells_ubiquitous germline cells_ubiquitous follicle cells somatic cells |
| stage10 |  s
 s
 s
 s
 s
 s | somatic cells follicle cells follicle cells_ubiquitous germline cells_ubiquitous |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Exclusionary patterns Yolk cortex exclusion Embryonic localization patterns Stage 1-3 Expressed Annotated by Eric Localized Medium expression (21-40ms exp) Maternal |
| stage4-5 | 
 | Pole cell exclusion Stage 4-5 Expressed Degradation maternal transcripts Perinuclear around blastoderm nuclei Perinuclear subset of nuclei Degraded completely stage 5 Exclusionary patterns Local terms for zyg transcripts Apical exclusion Accumlation entire nucleus vent blastoderm nuclei Subset blastoderm nuclei Intranuclear accumulation Localized Embryonic localization patterns Subcellular localization patterns Degraded partially stage 4 Perinuclear localization Degraded Blastoderm nuclei Zygotic post blastoderm nuclei Accumlation in subset nuclei Nuclei-associated localization Maternal |
| stage6-7 | 
 | Expressed Subcellular localization patterns Local terms for zyg transcripts Stage 6-7 Accumlation entire nucleus Blastoderm nuclei vent blastoderm nuclei Zygotic Subset blastoderm nuclei Intranuclear accumulation post blastoderm nuclei Localized Accumlation in subset nuclei Nuclei-associated localization |
| stage8-9 | 
 | Local terms for zyg transcripts Accumlation entire nucleus Blastoderm nuclei Segmented pattern Zygotic Subset blastoderm nuclei Intranuclear accumulation Localized Accumlation in subset nuclei Nuclei-associated localization Expressed Subcellular localization patterns Stage 8-9 |
| stage10- | 
 | Expressed Stage 10- Sensory sys Head Subcellular localization patterns Zygotic Blastoderm nuclei Localized CNS Brain vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | faint ubiquitous gap list_4-6:specific vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | list_7-8:specific vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | faint ubiquitous gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||