Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | post follicle cells somatic cells ant follicle cells interfollicular stalk cells enrichment_ubiquitous oocyte |
| stage8 |  s
 s
 s
 s
 s | germline cells_ubiquitous oocyte post follicle cells somatic cells ant follicle cells cytoplasmic foci |
| stage9 |  s
 s
 s
 s
 s | germline cells_ubiquitous follicle cells somatic cells follicle cells_ubiquitous |
| stage10 |  s
 s
 s
 s
 s
 s | follicle cells_ubiquitous somatic cells follicle cells germline cells_ubiquitous |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Stage 1-3 Expressed Embryonic localization patterns Yolk cortex exclusion Localized Annotated by Eric Exclusionary patterns Medium expression (21-40ms exp) Maternal |
| stage4-5 | 
 | Blastoderm nuclei Intranuclear accumulation Subcellular localization patterns Perinuclear around blastoderm nuclei vent blastoderm nuclei Degradation maternal transcripts Degraded completely stage 5 Localized Subset blastoderm nuclei Stage 4-5 Pole cell exclusion Embryonic localization patterns Degraded partially stage 4 Apical exclusion Expressed Zygotic Accumlation entire nucleus post blastoderm nuclei Exclusionary patterns Perinuclear localization Local terms for zyg transcripts Degraded Perinuclear subset of nuclei Accumlation in subset nuclei Nuclei-associated localization Maternal |
| stage6-7 | 
 | Stage 6-7 Local terms for zyg transcripts Accumlation in subset nuclei Nuclei-associated localization Expressed Blastoderm nuclei Accumlation entire nucleus Intranuclear accumulation Zygotic Subcellular localization patterns vent blastoderm nuclei post blastoderm nuclei Localized Subset blastoderm nuclei |
| stage8-9 | 
 | Subcellular localization patterns Intranuclear accumulation Accumlation entire nucleus Zygotic Blastoderm nuclei Subset blastoderm nuclei Segmented pattern Localized Stage 8-9 Local terms for zyg transcripts Nuclei-associated localization Expressed Accumlation in subset nuclei |
| stage10- | 
 | CNS Sensory sys Head Expressed Blastoderm nuclei Zygotic Subcellular localization patterns Brain Localized Stage 10- vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | list_4-6:specific faint ubiquitous gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap vent nerve cord A list_7-8:specific vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||