Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | ant follicle cells somatic cells oocyte post follicle cells interfollicular stalk cells enrichment_ubiquitous |
| stage8 |  s
 s
 s
 s
 s | ant follicle cells somatic cells oocyte germline cells_ubiquitous cytoplasmic foci post follicle cells |
| stage9 |  s
 s
 s
 s
 s | somatic cells germline cells_ubiquitous follicle cells_ubiquitous follicle cells |
| stage10 |  s
 s
 s
 s
 s
 s | somatic cells follicle cells_ubiquitous germline cells_ubiquitous follicle cells |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Yolk cortex exclusion Exclusionary patterns Expressed Localized Stage 1-3 Annotated by Eric Embryonic localization patterns Medium expression (21-40ms exp) Maternal |
| stage4-5 | 
 | Expressed post blastoderm nuclei Localized Accumlation entire nucleus Degraded partially stage 4 Degradation maternal transcripts Embryonic localization patterns Accumlation in subset nuclei Blastoderm nuclei Intranuclear accumulation Apical exclusion Subset blastoderm nuclei Exclusionary patterns Pole cell exclusion Degraded completely stage 5 Nuclei-associated localization Zygotic Subcellular localization patterns Perinuclear around blastoderm nuclei vent blastoderm nuclei Degraded Perinuclear localization Stage 4-5 Perinuclear subset of nuclei Local terms for zyg transcripts Maternal |
| stage6-7 | 
 | Accumlation in subset nuclei Stage 6-7 Local terms for zyg transcripts Blastoderm nuclei vent blastoderm nuclei Zygotic Localized Nuclei-associated localization post blastoderm nuclei Expressed Subcellular localization patterns Accumlation entire nucleus Subset blastoderm nuclei Intranuclear accumulation |
| stage8-9 | 
 | Blastoderm nuclei Local terms for zyg transcripts Accumlation in subset nuclei Stage 8-9 Subcellular localization patterns Accumlation entire nucleus Segmented pattern Localized Zygotic Nuclei-associated localization Expressed Subset blastoderm nuclei Intranuclear accumulation |
| stage10- | 
 | Blastoderm nuclei Brain Stage 10- CNS Subcellular localization patterns Head Sensory sys Zygotic Localized Expressed vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | gap faint ubiquitous list_4-6:specific vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | list_7-8:specific vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||