Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | enrichment_ubiquitous interfollicular stalk cells somatic cells oocyte post follicle cells ant follicle cells |
| stage8 |  s
 s
 s
 s
 s | germline cells_ubiquitous somatic cells post follicle cells ant follicle cells cytoplasmic foci oocyte |
| stage9 |  s
 s
 s
 s
 s | follicle cells follicle cells_ubiquitous germline cells_ubiquitous somatic cells |
| stage10 |  s
 s
 s
 s
 s
 s | germline cells_ubiquitous follicle cells_ubiquitous somatic cells follicle cells |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Exclusionary patterns Medium expression (21-40ms exp) Embryonic localization patterns Annotated by Eric Stage 1-3 Localized Expressed Yolk cortex exclusion Maternal |
| stage4-5 | 
 | Expressed vent blastoderm nuclei Accumlation in subset nuclei Local terms for zyg transcripts Stage 4-5 Degraded Localized Apical exclusion Nuclei-associated localization Intranuclear accumulation Subcellular localization patterns Degraded partially stage 4 post blastoderm nuclei Subset blastoderm nuclei Zygotic Blastoderm nuclei Exclusionary patterns Degradation maternal transcripts Pole cell exclusion Perinuclear localization Embryonic localization patterns Perinuclear around blastoderm nuclei Perinuclear subset of nuclei Degraded completely stage 5 Accumlation entire nucleus Maternal |
| stage6-7 | 
 | Localized Local terms for zyg transcripts Accumlation in subset nuclei vent blastoderm nuclei Expressed Nuclei-associated localization Intranuclear accumulation Subcellular localization patterns Accumlation entire nucleus Stage 6-7 Blastoderm nuclei post blastoderm nuclei Zygotic Subset blastoderm nuclei |
| stage8-9 | 
 | Nuclei-associated localization Intranuclear accumulation Localized Expressed Accumlation in subset nuclei Local terms for zyg transcripts Accumlation entire nucleus Zygotic Subset blastoderm nuclei Blastoderm nuclei Stage 8-9 Subcellular localization patterns Segmented pattern |
| stage10- | 
 | Subcellular localization patterns CNS Stage 10- Zygotic Blastoderm nuclei Sensory sys Localized Expressed Head Brain vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | list_4-6:specific gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap list_7-8:specific vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | faint ubiquitous gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||