Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | interfollicular stalk cells oocyte enrichment_ubiquitous ant follicle cells post follicle cells somatic cells |
| stage8 |  s
 s
 s
 s
 s | germline cells_ubiquitous oocyte cytoplasmic foci ant follicle cells post follicle cells somatic cells |
| stage9 |  s
 s
 s
 s
 s | somatic cells follicle cells follicle cells_ubiquitous germline cells_ubiquitous |
| stage10 |  s
 s
 s
 s
 s
 s | germline cells_ubiquitous follicle cells follicle cells_ubiquitous somatic cells |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Annotated by Eric Embryonic localization patterns Localized Expressed Yolk cortex exclusion Stage 1-3 Exclusionary patterns Medium expression (21-40ms exp) Maternal |
| stage4-5 | 
 | Perinuclear subset of nuclei Exclusionary patterns Perinuclear around blastoderm nuclei Perinuclear localization Localized Stage 4-5 Subcellular localization patterns Intranuclear accumulation Embryonic localization patterns Pole cell exclusion Degraded Zygotic Expressed Accumlation in subset nuclei Nuclei-associated localization Accumlation entire nucleus Degraded completely stage 5 Local terms for zyg transcripts Degradation maternal transcripts vent blastoderm nuclei Subset blastoderm nuclei Blastoderm nuclei Apical exclusion Degraded partially stage 4 post blastoderm nuclei Maternal |
| stage6-7 | 
 | post blastoderm nuclei Blastoderm nuclei vent blastoderm nuclei Subset blastoderm nuclei Local terms for zyg transcripts Subcellular localization patterns Intranuclear accumulation Accumlation entire nucleus Stage 6-7 Localized Expressed Nuclei-associated localization Accumlation in subset nuclei Zygotic |
| stage8-9 | 
 | Local terms for zyg transcripts Subcellular localization patterns Intranuclear accumulation Subset blastoderm nuclei Blastoderm nuclei Stage 8-9 Zygotic Expressed Localized Accumlation in subset nuclei Segmented pattern Nuclei-associated localization Accumlation entire nucleus |
| stage10- | 
 | Sensory sys CNS Localized Expressed Zygotic Stage 10- Blastoderm nuclei Head Brain Subcellular localization patterns vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | gap list_4-6:specific faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap vent nerve cord A list_7-8:specific vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||