Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | ant follicle cells enrichment_ubiquitous oocyte post follicle cells interfollicular stalk cells somatic cells |
| stage8 |  s
 s
 s
 s
 s | germline cells_ubiquitous ant follicle cells somatic cells cytoplasmic foci post follicle cells oocyte |
| stage9 |  s
 s
 s
 s
 s | somatic cells follicle cells germline cells_ubiquitous follicle cells_ubiquitous |
| stage10 |  s
 s
 s
 s
 s
 s | somatic cells follicle cells germline cells_ubiquitous follicle cells_ubiquitous |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Expressed Localized Embryonic localization patterns Yolk cortex exclusion Stage 1-3 Medium expression (21-40ms exp) Annotated by Eric Exclusionary patterns Maternal |
| stage4-5 | 
 | Nuclei-associated localization vent blastoderm nuclei Zygotic Stage 4-5 Degradation maternal transcripts Intranuclear accumulation Expressed Localized post blastoderm nuclei Degraded partially stage 4 Accumlation entire nucleus Subset blastoderm nuclei Pole cell exclusion Perinuclear around blastoderm nuclei Exclusionary patterns Degraded Blastoderm nuclei Subcellular localization patterns Apical exclusion Perinuclear subset of nuclei Embryonic localization patterns Accumlation in subset nuclei Degraded completely stage 5 Local terms for zyg transcripts Perinuclear localization Maternal |
| stage6-7 | 
 | Zygotic Subset blastoderm nuclei vent blastoderm nuclei Accumlation entire nucleus post blastoderm nuclei Nuclei-associated localization Accumlation in subset nuclei Localized Local terms for zyg transcripts Expressed Intranuclear accumulation Subcellular localization patterns Blastoderm nuclei Stage 6-7 |
| stage8-9 | 
 | Subset blastoderm nuclei Nuclei-associated localization Accumlation entire nucleus Stage 8-9 Zygotic Blastoderm nuclei Accumlation in subset nuclei Expressed Local terms for zyg transcripts Localized Intranuclear accumulation Subcellular localization patterns Segmented pattern |
| stage10- | 
 | Stage 10- Blastoderm nuclei Head Subcellular localization patterns Brain Localized Expressed CNS Sensory sys Zygotic vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | faint ubiquitous list_4-6:specific gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A list_7-8:specific gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||