Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | enrichment_ubiquitous interfollicular stalk cells post follicle cells ant follicle cells oocyte somatic cells |
| stage8 |  s
 s
 s
 s
 s | germline cells_ubiquitous cytoplasmic foci post follicle cells ant follicle cells oocyte somatic cells |
| stage9 |  s
 s
 s
 s
 s | germline cells_ubiquitous somatic cells follicle cells_ubiquitous follicle cells |
| stage10 |  s
 s
 s
 s
 s
 s | follicle cells somatic cells follicle cells_ubiquitous germline cells_ubiquitous |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Annotated by Eric Localized Expressed Exclusionary patterns Stage 1-3 Embryonic localization patterns Medium expression (21-40ms exp) Yolk cortex exclusion Maternal |
| stage4-5 | 
 | Degradation maternal transcripts Localized Accumlation entire nucleus Apical exclusion Local terms for zyg transcripts Perinuclear around blastoderm nuclei Perinuclear localization Accumlation in subset nuclei Subset blastoderm nuclei Expressed Subcellular localization patterns Stage 4-5 post blastoderm nuclei vent blastoderm nuclei Nuclei-associated localization Zygotic Blastoderm nuclei Perinuclear subset of nuclei Intranuclear accumulation Degraded Degraded completely stage 5 Embryonic localization patterns Degraded partially stage 4 Pole cell exclusion Exclusionary patterns Maternal |
| stage6-7 | 
 | vent blastoderm nuclei post blastoderm nuclei Localized Nuclei-associated localization Intranuclear accumulation Blastoderm nuclei Zygotic Accumlation entire nucleus Local terms for zyg transcripts Accumlation in subset nuclei Subset blastoderm nuclei Expressed Stage 6-7 Subcellular localization patterns |
| stage8-9 | 
 | Zygotic Blastoderm nuclei Intranuclear accumulation Nuclei-associated localization Localized Stage 8-9 Subcellular localization patterns Accumlation in subset nuclei Segmented pattern Subset blastoderm nuclei Expressed Local terms for zyg transcripts Accumlation entire nucleus |
| stage10- | 
 | Stage 10- Expressed Subcellular localization patterns Brain Sensory sys Head CNS Localized Zygotic Blastoderm nuclei vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | list_4-6:specific faint ubiquitous gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap vent nerve cord A list_7-8:specific vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||