Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | oocyte post follicle cells enrichment_ubiquitous ant follicle cells somatic cells interfollicular stalk cells |
| stage8 |  s
 s
 s
 s
 s | somatic cells cytoplasmic foci oocyte germline cells_ubiquitous post follicle cells ant follicle cells |
| stage9 |  s
 s
 s
 s
 s | follicle cells somatic cells follicle cells_ubiquitous germline cells_ubiquitous |
| stage10 |  s
 s
 s
 s
 s
 s | follicle cells_ubiquitous somatic cells follicle cells germline cells_ubiquitous |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Annotated by Eric Yolk cortex exclusion Embryonic localization patterns Exclusionary patterns Medium expression (21-40ms exp) Localized Stage 1-3 Expressed Maternal |
| stage4-5 | 
 | post blastoderm nuclei Intranuclear accumulation Degraded partially stage 4 Accumlation entire nucleus Nuclei-associated localization Perinuclear around blastoderm nuclei Perinuclear subset of nuclei Perinuclear localization Zygotic Pole cell exclusion Apical exclusion Subcellular localization patterns Expressed Degradation maternal transcripts Subset blastoderm nuclei Embryonic localization patterns Degraded vent blastoderm nuclei Degraded completely stage 5 Stage 4-5 Exclusionary patterns Local terms for zyg transcripts Accumlation in subset nuclei Blastoderm nuclei Localized Maternal |
| stage6-7 | 
 | Local terms for zyg transcripts Blastoderm nuclei Accumlation in subset nuclei Subcellular localization patterns Localized Expressed Zygotic Stage 6-7 Intranuclear accumulation Accumlation entire nucleus vent blastoderm nuclei Nuclei-associated localization post blastoderm nuclei Subset blastoderm nuclei |
| stage8-9 | 
 | Localized Subcellular localization patterns Expressed Local terms for zyg transcripts Accumlation in subset nuclei Blastoderm nuclei Zygotic Stage 8-9 Nuclei-associated localization Intranuclear accumulation Accumlation entire nucleus Segmented pattern Subset blastoderm nuclei |
| stage10- | 
 | Stage 10- Head Blastoderm nuclei Subcellular localization patterns Localized Expressed CNS Zygotic Brain Sensory sys vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | gap faint ubiquitous list_4-6:specific vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap list_7-8:specific vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | faint ubiquitous gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||