Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | ant follicle cells oocyte enrichment_ubiquitous somatic cells interfollicular stalk cells post follicle cells |
| stage8 |  s
 s
 s
 s
 s | ant follicle cells germline cells_ubiquitous oocyte somatic cells post follicle cells cytoplasmic foci |
| stage9 |  s
 s
 s
 s
 s | somatic cells follicle cells_ubiquitous follicle cells germline cells_ubiquitous |
| stage10 |  s
 s
 s
 s
 s
 s | germline cells_ubiquitous follicle cells follicle cells_ubiquitous somatic cells |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Annotated by Eric Medium expression (21-40ms exp) Embryonic localization patterns Yolk cortex exclusion Stage 1-3 Expressed Localized Exclusionary patterns Maternal |
| stage4-5 | 
 | Subcellular localization patterns Local terms for zyg transcripts Blastoderm nuclei Pole cell exclusion Zygotic Perinuclear localization Exclusionary patterns post blastoderm nuclei Nuclei-associated localization Intranuclear accumulation Apical exclusion Subset blastoderm nuclei Degraded completely stage 5 Degraded Accumlation in subset nuclei Perinuclear around blastoderm nuclei vent blastoderm nuclei Degradation maternal transcripts Embryonic localization patterns Stage 4-5 Accumlation entire nucleus Degraded partially stage 4 Expressed Perinuclear subset of nuclei Localized Maternal |
| stage6-7 | 
 | Stage 6-7 Blastoderm nuclei vent blastoderm nuclei Zygotic Subcellular localization patterns Local terms for zyg transcripts Accumlation in subset nuclei Intranuclear accumulation Expressed Localized Subset blastoderm nuclei post blastoderm nuclei Accumlation entire nucleus Nuclei-associated localization |
| stage8-9 | 
 | Localized Subset blastoderm nuclei Intranuclear accumulation Expressed Stage 8-9 Nuclei-associated localization Accumlation entire nucleus Zygotic Blastoderm nuclei Local terms for zyg transcripts Accumlation in subset nuclei Segmented pattern Subcellular localization patterns |
| stage10- | 
 | CNS Blastoderm nuclei Zygotic Sensory sys Stage 10- Brain Subcellular localization patterns Localized Expressed Head vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | list_4-6:specific gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap list_7-8:specific vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | faint ubiquitous gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||