Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | ant follicle cells interfollicular stalk cells enrichment_ubiquitous oocyte post follicle cells somatic cells |
| stage8 |  s
 s
 s
 s
 s | ant follicle cells oocyte germline cells_ubiquitous post follicle cells cytoplasmic foci somatic cells |
| stage9 |  s
 s
 s
 s
 s | somatic cells follicle cells_ubiquitous follicle cells germline cells_ubiquitous |
| stage10 |  s
 s
 s
 s
 s
 s | somatic cells follicle cells follicle cells_ubiquitous germline cells_ubiquitous |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Medium expression (21-40ms exp) Annotated by Eric Yolk cortex exclusion Exclusionary patterns Embryonic localization patterns Expressed Localized Stage 1-3 Maternal |
| stage4-5 | 
 | Intranuclear accumulation Subcellular localization patterns Pole cell exclusion Perinuclear around blastoderm nuclei Degraded partially stage 4 Accumlation entire nucleus Nuclei-associated localization Embryonic localization patterns Expressed Blastoderm nuclei Subset blastoderm nuclei Apical exclusion Perinuclear subset of nuclei Local terms for zyg transcripts Perinuclear localization Localized Exclusionary patterns Degraded completely stage 5 Stage 4-5 Accumlation in subset nuclei Degraded Zygotic vent blastoderm nuclei post blastoderm nuclei Degradation maternal transcripts Maternal |
| stage6-7 | 
 | Intranuclear accumulation Subcellular localization patterns Blastoderm nuclei Accumlation in subset nuclei Expressed Accumlation entire nucleus Nuclei-associated localization Stage 6-7 Subset blastoderm nuclei Local terms for zyg transcripts post blastoderm nuclei Localized Zygotic vent blastoderm nuclei |
| stage8-9 | 
 | Accumlation entire nucleus Segmented pattern Nuclei-associated localization Expressed Accumlation in subset nuclei Blastoderm nuclei Subcellular localization patterns Intranuclear accumulation Zygotic Stage 8-9 Local terms for zyg transcripts Localized Subset blastoderm nuclei |
| stage10- | 
 | Sensory sys Blastoderm nuclei Expressed Subcellular localization patterns Head Zygotic CNS Localized Stage 10- Brain vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | list_4-6:specific faint ubiquitous gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap list_7-8:specific vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | faint ubiquitous gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||