Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | oocyte somatic cells enrichment_ubiquitous post follicle cells ant follicle cells interfollicular stalk cells |
| stage8 |  s
 s
 s
 s
 s | post follicle cells ant follicle cells oocyte germline cells_ubiquitous cytoplasmic foci somatic cells |
| stage9 |  s
 s
 s
 s
 s | germline cells_ubiquitous somatic cells follicle cells follicle cells_ubiquitous |
| stage10 |  s
 s
 s
 s
 s
 s | follicle cells_ubiquitous follicle cells somatic cells germline cells_ubiquitous |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Exclusionary patterns Medium expression (21-40ms exp) Yolk cortex exclusion Expressed Annotated by Eric Stage 1-3 Embryonic localization patterns Localized Maternal |
| stage4-5 | 
 | Perinuclear localization Accumlation entire nucleus Nuclei-associated localization Expressed Exclusionary patterns Embryonic localization patterns Subset blastoderm nuclei Subcellular localization patterns Degradation maternal transcripts Blastoderm nuclei Pole cell exclusion Local terms for zyg transcripts Apical exclusion Accumlation in subset nuclei Perinuclear around blastoderm nuclei vent blastoderm nuclei Degraded completely stage 5 Intranuclear accumulation Zygotic Perinuclear subset of nuclei post blastoderm nuclei Stage 4-5 Degraded partially stage 4 Localized Degraded Maternal |
| stage6-7 | 
 | Blastoderm nuclei Zygotic post blastoderm nuclei Local terms for zyg transcripts Accumlation in subset nuclei Localized vent blastoderm nuclei Accumlation entire nucleus Nuclei-associated localization Expressed Intranuclear accumulation Subset blastoderm nuclei Subcellular localization patterns Stage 6-7 |
| stage8-9 | 
 | Segmented pattern Accumlation entire nucleus Nuclei-associated localization Expressed Intranuclear accumulation Subset blastoderm nuclei Subcellular localization patterns Zygotic Blastoderm nuclei Local terms for zyg transcripts Accumlation in subset nuclei Localized Stage 8-9 |
| stage10- | 
 | Localized Blastoderm nuclei Zygotic Stage 10- Subcellular localization patterns Head CNS Brain Expressed Sensory sys vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | gap list_4-6:specific faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A list_7-8:specific gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||