Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | ant follicle cells post follicle cells oocyte somatic cells interfollicular stalk cells enrichment_ubiquitous |
| stage8 |  s
 s
 s
 s
 s | germline cells_ubiquitous somatic cells cytoplasmic foci post follicle cells oocyte ant follicle cells |
| stage9 |  s
 s
 s
 s
 s | follicle cells somatic cells germline cells_ubiquitous follicle cells_ubiquitous |
| stage10 |  s
 s
 s
 s
 s
 s | follicle cells germline cells_ubiquitous follicle cells_ubiquitous somatic cells |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Exclusionary patterns Stage 1-3 Medium expression (21-40ms exp) Yolk cortex exclusion Embryonic localization patterns Expressed Localized Annotated by Eric Maternal |
| stage4-5 | 
 | Subset blastoderm nuclei Zygotic Exclusionary patterns Perinuclear subset of nuclei Subcellular localization patterns Degradation maternal transcripts Perinuclear localization Intranuclear accumulation Nuclei-associated localization Localized Degraded partially stage 4 Degraded Expressed Accumlation entire nucleus Local terms for zyg transcripts Stage 4-5 Perinuclear around blastoderm nuclei Degraded completely stage 5 vent blastoderm nuclei Pole cell exclusion Accumlation in subset nuclei Blastoderm nuclei Embryonic localization patterns post blastoderm nuclei Apical exclusion Maternal |
| stage6-7 | 
 | Subcellular localization patterns Stage 6-7 Intranuclear accumulation Localized vent blastoderm nuclei Nuclei-associated localization Accumlation in subset nuclei Expressed Blastoderm nuclei Accumlation entire nucleus post blastoderm nuclei Local terms for zyg transcripts Subset blastoderm nuclei Zygotic |
| stage8-9 | 
 | Zygotic Subset blastoderm nuclei Local terms for zyg transcripts Accumlation in subset nuclei Blastoderm nuclei Expressed Accumlation entire nucleus Stage 8-9 Nuclei-associated localization Localized Subcellular localization patterns Segmented pattern Intranuclear accumulation |
| stage10- | 
 | Zygotic Sensory sys Head Subcellular localization patterns Localized Stage 10- CNS Expressed Blastoderm nuclei Brain vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | list_4-6:specific gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap list_7-8:specific vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | faint ubiquitous gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||