Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | somatic cells post follicle cells oocyte interfollicular stalk cells ant follicle cells enrichment_ubiquitous |
| stage8 |  s
 s
 s
 s
 s | oocyte post follicle cells somatic cells cytoplasmic foci germline cells_ubiquitous ant follicle cells |
| stage9 |  s
 s
 s
 s
 s | follicle cells_ubiquitous germline cells_ubiquitous follicle cells somatic cells |
| stage10 |  s
 s
 s
 s
 s
 s | somatic cells follicle cells follicle cells_ubiquitous germline cells_ubiquitous |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Exclusionary patterns Yolk cortex exclusion Expressed Localized Embryonic localization patterns Medium expression (21-40ms exp) Annotated by Eric Stage 1-3 Maternal |
| stage4-5 | 
 | post blastoderm nuclei Nuclei-associated localization Blastoderm nuclei Perinuclear subset of nuclei Accumlation entire nucleus Degradation maternal transcripts Degraded completely stage 5 Perinuclear around blastoderm nuclei Embryonic localization patterns Localized Subset blastoderm nuclei Intranuclear accumulation Accumlation in subset nuclei Subcellular localization patterns vent blastoderm nuclei Local terms for zyg transcripts Pole cell exclusion Apical exclusion Perinuclear localization Expressed Degraded Degraded partially stage 4 Exclusionary patterns Stage 4-5 Zygotic Maternal |
| stage6-7 | 
 | Nuclei-associated localization post blastoderm nuclei Intranuclear accumulation Blastoderm nuclei Accumlation in subset nuclei Accumlation entire nucleus Subcellular localization patterns Stage 6-7 vent blastoderm nuclei Local terms for zyg transcripts Expressed Localized Zygotic Subset blastoderm nuclei |
| stage8-9 | 
 | Subset blastoderm nuclei Zygotic Expressed Localized Stage 8-9 Local terms for zyg transcripts Nuclei-associated localization Intranuclear accumulation Blastoderm nuclei Accumlation entire nucleus Segmented pattern Accumlation in subset nuclei Subcellular localization patterns |
| stage10- | 
 | Zygotic Brain Localized Expressed Head Stage 10- Blastoderm nuclei Subcellular localization patterns CNS Sensory sys vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | faint ubiquitous list_4-6:specific gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | list_7-8:specific gap vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | faint ubiquitous gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||