Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | interfollicular stalk cells post follicle cells ant follicle cells oocyte somatic cells enrichment_ubiquitous |
| stage8 |  s
 s
 s
 s
 s | post follicle cells somatic cells germline cells_ubiquitous oocyte cytoplasmic foci ant follicle cells |
| stage9 |  s
 s
 s
 s
 s | follicle cells follicle cells_ubiquitous somatic cells germline cells_ubiquitous |
| stage10 |  s
 s
 s
 s
 s
 s | follicle cells_ubiquitous somatic cells germline cells_ubiquitous follicle cells |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Embryonic localization patterns Localized Medium expression (21-40ms exp) Exclusionary patterns Expressed Yolk cortex exclusion Stage 1-3 Annotated by Eric Maternal |
| stage4-5 | 
 | Expressed Accumlation in subset nuclei vent blastoderm nuclei Zygotic Blastoderm nuclei Degraded completely stage 5 post blastoderm nuclei Subset blastoderm nuclei Perinuclear around blastoderm nuclei Exclusionary patterns Degradation maternal transcripts Embryonic localization patterns Stage 4-5 Degraded Localized Pole cell exclusion Perinuclear subset of nuclei Accumlation entire nucleus Apical exclusion Subcellular localization patterns Intranuclear accumulation Degraded partially stage 4 Perinuclear localization Nuclei-associated localization Local terms for zyg transcripts Maternal |
| stage6-7 | 
 | Local terms for zyg transcripts Localized Nuclei-associated localization Subset blastoderm nuclei post blastoderm nuclei Blastoderm nuclei Subcellular localization patterns Intranuclear accumulation Zygotic Stage 6-7 Accumlation entire nucleus vent blastoderm nuclei Accumlation in subset nuclei Expressed |
| stage8-9 | 
 | Segmented pattern Stage 8-9 Subset blastoderm nuclei Nuclei-associated localization Localized Local terms for zyg transcripts Accumlation in subset nuclei Expressed Accumlation entire nucleus Subcellular localization patterns Intranuclear accumulation Zygotic Blastoderm nuclei |
| stage10- | 
 | Stage 10- Brain Localized Expressed CNS Head Zygotic Subcellular localization patterns Blastoderm nuclei Sensory sys vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | gap list_4-6:specific faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | list_7-8:specific vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||