Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | post follicle cells enrichment_ubiquitous interfollicular stalk cells somatic cells ant follicle cells oocyte |
| stage8 |  s
 s
 s
 s
 s | post follicle cells germline cells_ubiquitous cytoplasmic foci somatic cells ant follicle cells oocyte |
| stage9 |  s
 s
 s
 s
 s | somatic cells follicle cells_ubiquitous germline cells_ubiquitous follicle cells |
| stage10 |  s
 s
 s
 s
 s
 s | somatic cells follicle cells_ubiquitous follicle cells germline cells_ubiquitous |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Yolk cortex exclusion Expressed Embryonic localization patterns Medium expression (21-40ms exp) Exclusionary patterns Annotated by Eric Stage 1-3 Localized Maternal |
| stage4-5 | 
 | Zygotic Pole cell exclusion Exclusionary patterns Stage 4-5 Nuclei-associated localization Degraded partially stage 4 Accumlation entire nucleus Embryonic localization patterns Blastoderm nuclei Expressed Subcellular localization patterns Perinuclear subset of nuclei Localized Accumlation in subset nuclei post blastoderm nuclei vent blastoderm nuclei Apical exclusion Subset blastoderm nuclei Intranuclear accumulation Degraded completely stage 5 Local terms for zyg transcripts Degradation maternal transcripts Perinuclear around blastoderm nuclei Degraded Perinuclear localization Maternal |
| stage6-7 | 
 | Accumlation entire nucleus Local terms for zyg transcripts Subcellular localization patterns Blastoderm nuclei Expressed Accumlation in subset nuclei Localized Zygotic Intranuclear accumulation Nuclei-associated localization Subset blastoderm nuclei vent blastoderm nuclei post blastoderm nuclei Stage 6-7 |
| stage8-9 | 
 | Local terms for zyg transcripts Accumlation entire nucleus Blastoderm nuclei Expressed Subcellular localization patterns Segmented pattern Zygotic Localized Accumlation in subset nuclei Stage 8-9 Subset blastoderm nuclei Nuclei-associated localization Intranuclear accumulation |
| stage10- | 
 | CNS Localized Zygotic Brain Expressed Blastoderm nuclei Sensory sys Subcellular localization patterns Stage 10- Head vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | faint ubiquitous gap list_4-6:specific vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap list_7-8:specific vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal | |
| stage4-6 | faint ubiquitous gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||