Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | enrichment_ubiquitous somatic cells oocyte ant follicle cells post follicle cells interfollicular stalk cells |
| stage8 |  s
 s
 s
 s
 s | cytoplasmic foci somatic cells oocyte germline cells_ubiquitous ant follicle cells post follicle cells |
| stage9 |  s
 s
 s
 s
 s | follicle cells_ubiquitous germline cells_ubiquitous follicle cells somatic cells |
| stage10 |  s
 s
 s
 s
 s
 s | somatic cells follicle cells germline cells_ubiquitous follicle cells_ubiquitous |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Expressed Exclusionary patterns Embryonic localization patterns Stage 1-3 Annotated by Eric Localized Yolk cortex exclusion Medium expression (21-40ms exp) Maternal |
| stage4-5 | 
 | Localized Stage 4-5 Subset blastoderm nuclei Expressed Pole cell exclusion Accumlation in subset nuclei Apical exclusion Degraded completely stage 5 Degraded partially stage 4 Local terms for zyg transcripts Subcellular localization patterns Degraded Accumlation entire nucleus Nuclei-associated localization Zygotic Perinuclear subset of nuclei Perinuclear localization Intranuclear accumulation Blastoderm nuclei post blastoderm nuclei vent blastoderm nuclei Degradation maternal transcripts Exclusionary patterns Embryonic localization patterns Perinuclear around blastoderm nuclei Maternal |
| stage6-7 | 
 | Accumlation in subset nuclei vent blastoderm nuclei Expressed Subset blastoderm nuclei post blastoderm nuclei Intranuclear accumulation Blastoderm nuclei Zygotic Accumlation entire nucleus Local terms for zyg transcripts Nuclei-associated localization Subcellular localization patterns Localized Stage 6-7 |
| stage8-9 | 
 | Blastoderm nuclei Intranuclear accumulation Subset blastoderm nuclei Expressed Stage 8-9 Accumlation in subset nuclei Localized Subcellular localization patterns Local terms for zyg transcripts Accumlation entire nucleus Nuclei-associated localization Zygotic Segmented pattern |
| stage10- | 
 | Head Sensory sys Localized Subcellular localization patterns Zygotic Brain Blastoderm nuclei CNS Stage 10- Expressed vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | list_4-6:specific faint ubiquitous gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | list_7-8:specific vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | faint ubiquitous gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap vent nerve cord A vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||