Annotation summary for cas in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | oocyte interfollicular stalk cells post follicle cells ant follicle cells somatic cells enrichment_ubiquitous |
| stage8 |  s
 s
 s
 s
 s | ant follicle cells somatic cells cytoplasmic foci post follicle cells oocyte germline cells_ubiquitous |
| stage9 |  s
 s
 s
 s
 s | follicle cells_ubiquitous germline cells_ubiquitous follicle cells somatic cells |
| stage10 |  s
 s
 s
 s
 s
 s | follicle cells_ubiquitous germline cells_ubiquitous follicle cells somatic cells |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for cas in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Embryonic localization patterns Stage 1-3 Medium expression (21-40ms exp) Expressed Yolk cortex exclusion Annotated by Eric Exclusionary patterns Localized Maternal |
| stage4-5 | 
 | Stage 4-5 Degradation maternal transcripts Localized Subcellular localization patterns Perinuclear around blastoderm nuclei Zygotic Pole cell exclusion Accumlation in subset nuclei Degraded partially stage 4 Intranuclear accumulation Apical exclusion Blastoderm nuclei Perinuclear localization Nuclei-associated localization Degraded vent blastoderm nuclei Subset blastoderm nuclei post blastoderm nuclei Embryonic localization patterns Expressed Accumlation entire nucleus Local terms for zyg transcripts Exclusionary patterns Degraded completely stage 5 Perinuclear subset of nuclei Maternal |
| stage6-7 | 
 | Zygotic post blastoderm nuclei vent blastoderm nuclei Subset blastoderm nuclei Local terms for zyg transcripts Accumlation entire nucleus Expressed Stage 6-7 Nuclei-associated localization Intranuclear accumulation Blastoderm nuclei Subcellular localization patterns Localized Accumlation in subset nuclei |
| stage8-9 | 
 | Local terms for zyg transcripts Accumlation entire nucleus Expressed Subset blastoderm nuclei Zygotic Accumlation in subset nuclei Stage 8-9 Subcellular localization patterns Localized Nuclei-associated localization Blastoderm nuclei Intranuclear accumulation Segmented pattern |
| stage10- | 
 | CNS Expressed Zygotic Brain Sensory sys Head Blastoderm nuclei Subcellular localization patterns Localized Stage 10- vent nerve cord |
Annotation summary for cas in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD36057-dg (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | faint ubiquitous list_4-6:specific gap vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | gap vent nerve cord A list_7-8:specific vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:subset_CNS cat_term:any_neural brain vent nerve cord | |
| Probe source: | LD36057 (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal | |
| stage4-6 | gap faint ubiquitous vent ectoderm AISN mesectoderm AISN | |
| stage7-8 | vent nerve cord A gap vent ectoderm PR mesectoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR mesectoderm PR | |
| stage11-12 | brain PR vent nerve cord PR midline PR | |
| stage13-16 | cat_term:any_neural cat_term:subset_CNS brain vent nerve cord | |
| Probe source: | fTRG_10219_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_10219_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_RNA (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | fTRG_877_protein (Flybase link CG2102 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||