DOT

Annotation summary for dm in insitu_ovaries_public

Legend: RNA signal: green, DNA staining: magenta

Probe source:	LD32539-dg (Flybase link CG10798 , FlyFish insitu , BDGP insitu new)
stage	images	Annotation
stage1	s s s	interesting pattern
stage2-7	s s s s s s s s s s s s s s s s s s	somatic cells nuclear foci nurse cells nurse cells_nuclear foci follicle cells germline cells_ubiquitous
stage8	s s s s	oocyte somatic cells follicle cells cytoplasmic foci germline cells_ubiquitous nuclear foci nurse cells_nuclear foci nurse cells
stage9	s s s s s s	nuclear foci nurse cells nurse cells_nuclear foci follicle cells cytoplasmic foci somatic cells oocyte
stage10	s s s s s s s	nurse cells post restriction nurse cells_nuclear foci oocyte nucleus nuclear foci follicle cells oocyte somatic cells
Probe source:	LD32539 (Flybase link CG10798 , FlyFish insitu , BDGP insitu new)
No images or annotation terms
Probe source:	GM04911 (Flybase link CG10798 , FlyFish insitu , BDGP insitu new)
No images or annotation terms
Probe source:	LD32539-tf (Flybase link CG10798 , FlyFish insitu , BDGP insitu new)
No images or annotation terms

Annotation summary for dm in insitu_fish

Legend: RNA signal: green, DNA staining: magenta

Probe source:	LD32539 (Flybase link CG10798 , FlyFish insitu , BDGP insitu new)
stage	images	Annotation
stage1-3		Nuclei associated localization Embryonic localization patterns Microtubule-associated Perinuclear around pole cell nuclei Cell division apparatus Weak expression (>41ms exp) Annotated by Eric Stage 1-3 Expressed Perinuclear localization post localization Subcellular localization patterns Perinuclear around cortical nuclei Localized Maternal Pole plasm
stage4-5		Subset blastoderm nuclei Pole cell enrichment Expressed Zygotic Stage 4-5 post localization Localized Degraded Degraded partially stage 4 Zygotic starting stage 5 Pole cell localization Segmented pattern Embryonic localization patterns Terminal-gene pattern Degradation maternal transcripts Blastoderm nuclei Degraded completely stage 5 Maternal
stage6-7		Expressed Segmented pattern Terminal-gene pattern Subset blastoderm nuclei Stage 6-7 Blastoderm nuclei Zygotic
stage8-9		Zygotic Blastoderm nuclei Expression in API Subset yolk nuclei Expression in mesoderm Subset blastoderm nuclei Random yolk nuclei Segmented pattern Stage 8-9 Expressed Yolk nuclei
Probe source:	GM04911 (Flybase link CG10798 , FlyFish insitu , BDGP insitu new)
stage	images	Annotation
stage1-3		No probe Annotated by Christina
stage4-5
stage6-7
stage8-9

Annotation summary for dm in insitu

Legend: RNA signal: green, DNA staining: magenta

Probe source:	(best) LD32539-tf (Flybase link CG10798 , FlyFish insitu , BDGP insitu new)
stage	images	Annotation
stage1-3		(localised) cat_term:global_finito flag_for_volker maternal pole plasm
stage4-6		subset cellular blastoderm procephalic ectoderm AISN foregut AISN trunk mesoderm AISN head mesoderm AISN post endoderm AISN ant endoderm AISN endoderm AISN
stage7-8		foregut A trunk mesoderm PR head mesoderm PR post endoderm PR ant endoderm A
stage9-10		foregut PR salivary gland body SA trunk mesoderm PR head mesoderm PR post endoderm PR ant endoderm PR
stage11-12		foregut PR proventriculus PR tracheal PR salivary gland body PR anal pad SA hindgut proper PR trunk mesoderm PR dors pharyngeal muscle PR ant midgut PR post midgut PR
stage13-16		proventriculus salivary gland duct anal pad large intestine hindgut lymph gland somatic muscle muscle sys fat body corpus cardiacum dors prothoracic pharyngeal muscle midgut
Probe source:	LD32539-dg (Flybase link CG10798 , FlyFish insitu , BDGP insitu new)
stage	images	Annotation
stage1-3		flag_for_volker cat_term:global_finito maternal pole plasm
stage4-6		subset AISN list_4-6:specific cellular blastoderm procephalic ectoderm AISN foregut AISN trunk mesoderm AISN head mesoderm AISN post endoderm AISN ant endoderm AISN endoderm AISN
stage7-8		list_7-8:specific foregut A trunk mesoderm PR head mesoderm PR post endoderm PR ant endoderm A
stage9-10		foregut PR salivary gland body SA trunk mesoderm PR head mesoderm PR post endoderm PR ant endoderm PR
stage11-12		proventriculus PR foregut PR tracheal PR salivary gland body PR anal pad SA hindgut proper PR trunk mesoderm PR dors pharyngeal muscle PR post midgut PR ant midgut PR
stage13-16		proventriculus anal pad salivary gland duct hindgut large intestine corpus cardiacum fat body muscle sys somatic muscle lymph gland dors prothoracic pharyngeal muscle midgut
Probe source:	LD32539 (Flybase link CG10798 , FlyFish insitu , BDGP insitu new)
stage	images	Annotation
stage1-3		flag_for_volker cat_term:global_finito maternal pole plasm
stage4-6		subset cellular blastoderm procephalic ectoderm AISN foregut AISN trunk mesoderm AISN head mesoderm AISN post endoderm AISN endoderm AISN ant endoderm AISN
stage7-8		foregut A trunk mesoderm PR head mesoderm PR post endoderm PR ant endoderm A
stage9-10		foregut PR salivary gland body SA trunk mesoderm PR head mesoderm PR post endoderm PR ant endoderm PR
stage11-12		foregut PR proventriculus PR tracheal PR salivary gland body PR anal pad SA hindgut proper PR trunk mesoderm PR dors pharyngeal muscle PR ant midgut PR post midgut PR
stage13-16		proventriculus anal pad salivary gland duct hindgut large intestine corpus cardiacum fat body muscle sys somatic muscle lymph gland dors prothoracic pharyngeal muscle midgut
Probe source:	(Flybase link CG10798 , FlyFish insitu , BDGP insitu new)
stage	images	Annotation
stage1-3		cat_term:global_finito maternal pole plasm
stage4-6		list_4-6:specific subset cellular blastoderm procephalic ectoderm AISN foregut AISN trunk mesoderm AISN head mesoderm AISN post endoderm AISN endoderm AISN ant endoderm AISN
stage7-8		list_7-8:specific foregut A trunk mesoderm PR head mesoderm PR ant endoderm A post endoderm PR
stage9-10		foregut PR salivary gland body SA trunk mesoderm PR head mesoderm PR post endoderm PR ant endoderm PR
stage11-12		foregut PR proventriculus PR tracheal PR anal pad SA salivary gland body PR hindgut proper PR trunk mesoderm PR dors pharyngeal muscle PR ant midgut PR post midgut PR
stage13-16		proventriculus anal pad salivary gland duct hindgut large intestine muscle sys corpus cardiacum fat body lymph gland somatic muscle dors prothoracic pharyngeal muscle midgut
Probe source:	GM04911 (Flybase link CG10798 , FlyFish insitu , BDGP insitu new)
No images or annotation terms