Annotation summary for dm in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD32539-dg (Flybase link CG10798 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s | interesting pattern |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | nurse cells_nuclear foci somatic cells germline cells_ubiquitous nuclear foci nurse cells follicle cells |
| stage8 |  s
 s
 s
 s | cytoplasmic foci nurse cells_nuclear foci oocyte nurse cells nuclear foci somatic cells follicle cells germline cells_ubiquitous |
| stage9 |  s
 s
 s
 s
 s
 s | nurse cells oocyte follicle cells nuclear foci cytoplasmic foci somatic cells nurse cells_nuclear foci |
| stage10 |  s
 s
 s
 s
 s
 s
 s | follicle cells post restriction somatic cells nurse cells oocyte nuclear foci oocyte nucleus nurse cells_nuclear foci |
| Probe source: | LD32539 (Flybase link CG10798 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | GM04911 (Flybase link CG10798 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | LD32539-tf (Flybase link CG10798 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for dm in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD32539 (Flybase link CG10798 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Nuclei associated localization Perinuclear around pole cell nuclei Cell division apparatus Embryonic localization patterns Weak expression (>41ms exp) Perinuclear localization post localization Microtubule-associated Annotated by Eric Perinuclear around cortical nuclei Expressed Localized Subcellular localization patterns Stage 1-3 Maternal Pole plasm |
| stage4-5 | 
 | Zygotic Degraded partially stage 4 Zygotic starting stage 5 Localized Degradation maternal transcripts Stage 4-5 Degraded Segmented pattern Pole cell localization Blastoderm nuclei Pole cell enrichment Embryonic localization patterns post localization Subset blastoderm nuclei Degraded completely stage 5 Terminal-gene pattern Expressed Maternal |
| stage6-7 | 
 | Expressed Terminal-gene pattern Segmented pattern Stage 6-7 Subset blastoderm nuclei Zygotic Blastoderm nuclei |
| stage8-9 | 
 | Expressed Segmented pattern Stage 8-9 Subset blastoderm nuclei Expression in API Expression in mesoderm Subset yolk nuclei Zygotic Random yolk nuclei Blastoderm nuclei Yolk nuclei |
| Probe source: | GM04911 (Flybase link CG10798 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | No probe Annotated by Christina |
| stage4-5 | 
 | |
| stage6-7 | 
 | |
| stage8-9 | 
 | |
Annotation summary for dm in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD32539-tf (Flybase link CG10798 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito (localised) flag_for_volker maternal pole plasm | |
| stage4-6 | subset cellular blastoderm procephalic ectoderm AISN foregut AISN trunk mesoderm AISN head mesoderm AISN endoderm AISN ant endoderm AISN post endoderm AISN | |
| stage7-8 | foregut A trunk mesoderm PR head mesoderm PR ant endoderm A post endoderm PR | |
| stage9-10 | foregut PR salivary gland body SA trunk mesoderm PR head mesoderm PR post endoderm PR ant endoderm PR | |
| stage11-12 | proventriculus PR foregut PR tracheal PR anal pad SA salivary gland body PR hindgut proper PR trunk mesoderm PR dors pharyngeal muscle PR post midgut PR ant midgut PR | |
| stage13-16 | proventriculus anal pad salivary gland duct large intestine hindgut fat body corpus cardiacum somatic muscle lymph gland muscle sys dors prothoracic pharyngeal muscle midgut | |
| Probe source: | LD32539-dg (Flybase link CG10798 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | flag_for_volker cat_term:global_finito maternal pole plasm | |
| stage4-6 | subset list_4-6:specific AISN cellular blastoderm procephalic ectoderm AISN foregut AISN trunk mesoderm AISN head mesoderm AISN endoderm AISN ant endoderm AISN post endoderm AISN | |
| stage7-8 | list_7-8:specific foregut A trunk mesoderm PR head mesoderm PR post endoderm PR ant endoderm A | |
| stage9-10 | foregut PR salivary gland body SA trunk mesoderm PR head mesoderm PR ant endoderm PR post endoderm PR | |
| stage11-12 | proventriculus PR foregut PR tracheal PR anal pad SA salivary gland body PR hindgut proper PR trunk mesoderm PR dors pharyngeal muscle PR ant midgut PR post midgut PR | |
| stage13-16 | proventriculus anal pad salivary gland duct large intestine hindgut somatic muscle corpus cardiacum lymph gland muscle sys fat body dors prothoracic pharyngeal muscle midgut | |
| Probe source: | LD32539 (Flybase link CG10798 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito flag_for_volker maternal pole plasm | |
| stage4-6 | subset cellular blastoderm procephalic ectoderm AISN foregut AISN trunk mesoderm AISN head mesoderm AISN post endoderm AISN ant endoderm AISN endoderm AISN | |
| stage7-8 | foregut A trunk mesoderm PR head mesoderm PR post endoderm PR ant endoderm A | |
| stage9-10 | foregut PR salivary gland body SA trunk mesoderm PR head mesoderm PR post endoderm PR ant endoderm PR | |
| stage11-12 | foregut PR proventriculus PR tracheal PR salivary gland body PR anal pad SA hindgut proper PR trunk mesoderm PR dors pharyngeal muscle PR post midgut PR ant midgut PR | |
| stage13-16 | proventriculus salivary gland duct anal pad hindgut large intestine muscle sys lymph gland somatic muscle corpus cardiacum fat body dors prothoracic pharyngeal muscle midgut | |
| Probe source: | (Flybase link CG10798 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | cat_term:global_finito maternal pole plasm |
| stage4-6 | 
 | list_4-6:specific subset cellular blastoderm procephalic ectoderm AISN foregut AISN trunk mesoderm AISN head mesoderm AISN ant endoderm AISN post endoderm AISN endoderm AISN |
| stage7-8 | 
 | list_7-8:specific foregut A trunk mesoderm PR head mesoderm PR post endoderm PR ant endoderm A |
| stage9-10 | 
 | foregut PR salivary gland body SA trunk mesoderm PR head mesoderm PR ant endoderm PR post endoderm PR |
| stage11-12 | 
 | foregut PR proventriculus PR tracheal PR salivary gland body PR anal pad SA hindgut proper PR trunk mesoderm PR dors pharyngeal muscle PR post midgut PR ant midgut PR |
| stage13-16 | 
 | proventriculus salivary gland duct anal pad hindgut large intestine fat body muscle sys lymph gland somatic muscle corpus cardiacum dors prothoracic pharyngeal muscle midgut |
| Probe source: | GM04911 (Flybase link CG10798 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||