DOT

Annotation summary for dm in insitu_ovaries_public

Legend: RNA signal: green, DNA staining: magenta

Probe source:	LD32539-dg (Flybase link CG10798 , FlyFish insitu , BDGP insitu new)
stage	images	Annotation
stage1	s s s	interesting pattern
stage2-7	s s s s s s s s s s s s s s s s s s	germline cells_ubiquitous nurse cells_nuclear foci somatic cells nuclear foci nurse cells follicle cells
stage8	s s s s	nurse cells follicle cells nuclear foci oocyte nurse cells_nuclear foci cytoplasmic foci germline cells_ubiquitous somatic cells
stage9	s s s s s s	cytoplasmic foci nurse cells_nuclear foci nuclear foci oocyte somatic cells follicle cells nurse cells
stage10	s s s s s s s	somatic cells oocyte nucleus post restriction follicle cells nurse cells nuclear foci oocyte nurse cells_nuclear foci
Probe source:	LD32539 (Flybase link CG10798 , FlyFish insitu , BDGP insitu new)
No images or annotation terms
Probe source:	GM04911 (Flybase link CG10798 , FlyFish insitu , BDGP insitu new)
No images or annotation terms
Probe source:	LD32539-tf (Flybase link CG10798 , FlyFish insitu , BDGP insitu new)
No images or annotation terms

Annotation summary for dm in insitu_fish

Legend: RNA signal: green, DNA staining: magenta

Probe source:	LD32539 (Flybase link CG10798 , FlyFish insitu , BDGP insitu new)
stage	images	Annotation
stage1-3		Localized Stage 1-3 Perinuclear around pole cell nuclei Nuclei associated localization Embryonic localization patterns Perinuclear localization Weak expression (>41ms exp) Perinuclear around cortical nuclei post localization Microtubule-associated Cell division apparatus Subcellular localization patterns Annotated by Eric Expressed Maternal Pole plasm
stage4-5		Degraded partially stage 4 Expressed Segmented pattern Blastoderm nuclei Terminal-gene pattern Degradation maternal transcripts Degraded completely stage 5 Pole cell enrichment Subset blastoderm nuclei Zygotic starting stage 5 post localization Zygotic Pole cell localization Stage 4-5 Embryonic localization patterns Degraded Localized Maternal
stage6-7		Subset blastoderm nuclei Stage 6-7 Zygotic Segmented pattern Expressed Blastoderm nuclei Terminal-gene pattern
stage8-9		Expression in mesoderm Subset yolk nuclei Subset blastoderm nuclei Expression in API Blastoderm nuclei Stage 8-9 Segmented pattern Zygotic Random yolk nuclei Expressed Yolk nuclei
Probe source:	GM04911 (Flybase link CG10798 , FlyFish insitu , BDGP insitu new)
stage	images	Annotation
stage1-3		Annotated by Christina No probe
stage4-5
stage6-7
stage8-9

Annotation summary for dm in insitu

Legend: RNA signal: green, DNA staining: magenta

Probe source:	(best) LD32539-tf (Flybase link CG10798 , FlyFish insitu , BDGP insitu new)
stage	images	Annotation
stage1-3		cat_term:global_finito flag_for_volker (localised) maternal pole plasm
stage4-6		subset cellular blastoderm procephalic ectoderm AISN foregut AISN trunk mesoderm AISN head mesoderm AISN post endoderm AISN endoderm AISN ant endoderm AISN
stage7-8		foregut A trunk mesoderm PR head mesoderm PR post endoderm PR ant endoderm A
stage9-10		foregut PR salivary gland body SA trunk mesoderm PR head mesoderm PR post endoderm PR ant endoderm PR
stage11-12		foregut PR proventriculus PR tracheal PR anal pad SA salivary gland body PR hindgut proper PR trunk mesoderm PR dors pharyngeal muscle PR ant midgut PR post midgut PR
stage13-16		proventriculus anal pad salivary gland duct large intestine hindgut lymph gland corpus cardiacum somatic muscle fat body muscle sys dors prothoracic pharyngeal muscle midgut
Probe source:	LD32539-dg (Flybase link CG10798 , FlyFish insitu , BDGP insitu new)
stage	images	Annotation
stage1-3		flag_for_volker cat_term:global_finito maternal pole plasm
stage4-6		list_4-6:specific subset AISN cellular blastoderm procephalic ectoderm AISN foregut AISN trunk mesoderm AISN head mesoderm AISN ant endoderm AISN endoderm AISN post endoderm AISN
stage7-8		list_7-8:specific foregut A trunk mesoderm PR head mesoderm PR ant endoderm A post endoderm PR
stage9-10		foregut PR salivary gland body SA trunk mesoderm PR head mesoderm PR ant endoderm PR post endoderm PR
stage11-12		proventriculus PR foregut PR tracheal PR anal pad SA salivary gland body PR hindgut proper PR trunk mesoderm PR dors pharyngeal muscle PR ant midgut PR post midgut PR
stage13-16		proventriculus salivary gland duct anal pad large intestine hindgut fat body muscle sys lymph gland corpus cardiacum somatic muscle dors prothoracic pharyngeal muscle midgut
Probe source:	LD32539 (Flybase link CG10798 , FlyFish insitu , BDGP insitu new)
stage	images	Annotation
stage1-3		cat_term:global_finito flag_for_volker maternal pole plasm
stage4-6		subset cellular blastoderm procephalic ectoderm AISN foregut AISN trunk mesoderm AISN head mesoderm AISN endoderm AISN post endoderm AISN ant endoderm AISN
stage7-8		foregut A trunk mesoderm PR head mesoderm PR post endoderm PR ant endoderm A
stage9-10		foregut PR salivary gland body SA trunk mesoderm PR head mesoderm PR ant endoderm PR post endoderm PR
stage11-12		proventriculus PR foregut PR tracheal PR anal pad SA salivary gland body PR hindgut proper PR trunk mesoderm PR dors pharyngeal muscle PR ant midgut PR post midgut PR
stage13-16		proventriculus anal pad salivary gland duct hindgut large intestine somatic muscle corpus cardiacum lymph gland muscle sys fat body dors prothoracic pharyngeal muscle midgut
Probe source:	(Flybase link CG10798 , FlyFish insitu , BDGP insitu new)
stage	images	Annotation
stage1-3		cat_term:global_finito maternal pole plasm
stage4-6		list_4-6:specific subset cellular blastoderm procephalic ectoderm AISN foregut AISN trunk mesoderm AISN head mesoderm AISN post endoderm AISN endoderm AISN ant endoderm AISN
stage7-8		list_7-8:specific foregut A trunk mesoderm PR head mesoderm PR post endoderm PR ant endoderm A
stage9-10		foregut PR salivary gland body SA trunk mesoderm PR head mesoderm PR post endoderm PR ant endoderm PR
stage11-12		foregut PR proventriculus PR tracheal PR anal pad SA salivary gland body PR hindgut proper PR trunk mesoderm PR dors pharyngeal muscle PR ant midgut PR post midgut PR
stage13-16		proventriculus salivary gland duct anal pad hindgut large intestine fat body muscle sys corpus cardiacum somatic muscle lymph gland dors prothoracic pharyngeal muscle midgut
Probe source:	GM04911 (Flybase link CG10798 , FlyFish insitu , BDGP insitu new)
No images or annotation terms