DOT

Annotation summary for dm in insitu_ovaries_public

Legend: RNA signal: green, DNA staining: magenta

Probe source:	LD32539-dg (Flybase link CG10798 , FlyFish insitu , BDGP insitu new)
stage	images	Annotation
stage1	s s s	interesting pattern
stage2-7	s s s s s s s s s s s s s s s s s s	follicle cells nurse cells_nuclear foci nurse cells germline cells_ubiquitous nuclear foci somatic cells
stage8	s s s s	somatic cells germline cells_ubiquitous oocyte nuclear foci nurse cells cytoplasmic foci follicle cells nurse cells_nuclear foci
stage9	s s s s s s	oocyte somatic cells nuclear foci nurse cells nurse cells_nuclear foci cytoplasmic foci follicle cells
stage10	s s s s s s s	oocyte nuclear foci nurse cells post restriction follicle cells nurse cells_nuclear foci somatic cells oocyte nucleus
Probe source:	LD32539 (Flybase link CG10798 , FlyFish insitu , BDGP insitu new)
No images or annotation terms
Probe source:	GM04911 (Flybase link CG10798 , FlyFish insitu , BDGP insitu new)
No images or annotation terms
Probe source:	LD32539-tf (Flybase link CG10798 , FlyFish insitu , BDGP insitu new)
No images or annotation terms

Annotation summary for dm in insitu_fish

Legend: RNA signal: green, DNA staining: magenta

Probe source:	LD32539 (Flybase link CG10798 , FlyFish insitu , BDGP insitu new)
stage	images	Annotation
stage1-3		Expressed Embryonic localization patterns Weak expression (>41ms exp) Perinuclear around cortical nuclei Stage 1-3 Perinuclear localization Subcellular localization patterns Annotated by Eric post localization Cell division apparatus Nuclei associated localization Microtubule-associated Localized Perinuclear around pole cell nuclei Maternal Pole plasm
stage4-5		post localization Segmented pattern Localized Subset blastoderm nuclei Pole cell enrichment Degraded partially stage 4 Blastoderm nuclei Stage 4-5 Expressed Zygotic starting stage 5 Degraded completely stage 5 Embryonic localization patterns Pole cell localization Degradation maternal transcripts Zygotic Terminal-gene pattern Degraded Maternal
stage6-7		Terminal-gene pattern Segmented pattern Expressed Zygotic Subset blastoderm nuclei Blastoderm nuclei Stage 6-7
stage8-9		Segmented pattern Expressed Random yolk nuclei Subset yolk nuclei Blastoderm nuclei Expression in API Stage 8-9 Zygotic Subset blastoderm nuclei Expression in mesoderm Yolk nuclei
Probe source:	GM04911 (Flybase link CG10798 , FlyFish insitu , BDGP insitu new)
stage	images	Annotation
stage1-3		Annotated by Christina No probe
stage4-5
stage6-7
stage8-9

Annotation summary for dm in insitu

Legend: RNA signal: green, DNA staining: magenta

Probe source:	(best) LD32539-tf (Flybase link CG10798 , FlyFish insitu , BDGP insitu new)
stage	images	Annotation
stage1-3		(localised) cat_term:global_finito flag_for_volker maternal pole plasm
stage4-6		subset cellular blastoderm procephalic ectoderm AISN foregut AISN trunk mesoderm AISN head mesoderm AISN post endoderm AISN endoderm AISN ant endoderm AISN
stage7-8		foregut A trunk mesoderm PR head mesoderm PR post endoderm PR ant endoderm A
stage9-10		foregut PR salivary gland body SA trunk mesoderm PR head mesoderm PR ant endoderm PR post endoderm PR
stage11-12		proventriculus PR foregut PR tracheal PR anal pad SA salivary gland body PR hindgut proper PR trunk mesoderm PR dors pharyngeal muscle PR post midgut PR ant midgut PR
stage13-16		proventriculus anal pad salivary gland duct large intestine hindgut fat body corpus cardiacum muscle sys somatic muscle lymph gland dors prothoracic pharyngeal muscle midgut
Probe source:	LD32539-dg (Flybase link CG10798 , FlyFish insitu , BDGP insitu new)
stage	images	Annotation
stage1-3		flag_for_volker cat_term:global_finito maternal pole plasm
stage4-6		list_4-6:specific AISN subset cellular blastoderm procephalic ectoderm AISN foregut AISN trunk mesoderm AISN head mesoderm AISN endoderm AISN post endoderm AISN ant endoderm AISN
stage7-8		list_7-8:specific foregut A trunk mesoderm PR head mesoderm PR ant endoderm A post endoderm PR
stage9-10		foregut PR salivary gland body SA trunk mesoderm PR head mesoderm PR ant endoderm PR post endoderm PR
stage11-12		foregut PR proventriculus PR tracheal PR salivary gland body PR anal pad SA hindgut proper PR trunk mesoderm PR dors pharyngeal muscle PR ant midgut PR post midgut PR
stage13-16		proventriculus salivary gland duct anal pad large intestine hindgut somatic muscle lymph gland corpus cardiacum fat body muscle sys dors prothoracic pharyngeal muscle midgut
Probe source:	LD32539 (Flybase link CG10798 , FlyFish insitu , BDGP insitu new)
stage	images	Annotation
stage1-3		cat_term:global_finito flag_for_volker maternal pole plasm
stage4-6		subset cellular blastoderm procephalic ectoderm AISN foregut AISN trunk mesoderm AISN head mesoderm AISN endoderm AISN post endoderm AISN ant endoderm AISN
stage7-8		foregut A trunk mesoderm PR head mesoderm PR post endoderm PR ant endoderm A
stage9-10		foregut PR salivary gland body SA trunk mesoderm PR head mesoderm PR post endoderm PR ant endoderm PR
stage11-12		foregut PR proventriculus PR tracheal PR salivary gland body PR anal pad SA hindgut proper PR trunk mesoderm PR dors pharyngeal muscle PR ant midgut PR post midgut PR
stage13-16		proventriculus salivary gland duct anal pad large intestine hindgut somatic muscle lymph gland fat body corpus cardiacum muscle sys dors prothoracic pharyngeal muscle midgut
Probe source:	(Flybase link CG10798 , FlyFish insitu , BDGP insitu new)
stage	images	Annotation
stage1-3		cat_term:global_finito maternal pole plasm
stage4-6		list_4-6:specific subset cellular blastoderm procephalic ectoderm AISN foregut AISN trunk mesoderm AISN head mesoderm AISN ant endoderm AISN endoderm AISN post endoderm AISN
stage7-8		list_7-8:specific foregut A trunk mesoderm PR head mesoderm PR ant endoderm A post endoderm PR
stage9-10		foregut PR salivary gland body SA trunk mesoderm PR head mesoderm PR ant endoderm PR post endoderm PR
stage11-12		proventriculus PR foregut PR tracheal PR anal pad SA salivary gland body PR hindgut proper PR trunk mesoderm PR dors pharyngeal muscle PR post midgut PR ant midgut PR
stage13-16		proventriculus anal pad salivary gland duct hindgut large intestine muscle sys corpus cardiacum fat body lymph gland somatic muscle dors prothoracic pharyngeal muscle midgut
Probe source:	GM04911 (Flybase link CG10798 , FlyFish insitu , BDGP insitu new)
No images or annotation terms