Annotation summary for for in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD46758-dg (Flybase link CG10033 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s
 s
 s | |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | enrichment_ubiquitous oocyte |
| stage8 |  s
 s
 s
 s
 s
 s
 s
 s | oocyte_ubiquitous oocyte |
| stage9 |  s
 s
 s
 s
 s
 s
 s
 s
 s | oocyte cytoplasmic foci |
| stage10 |  s
 s
 s
 s
 s
 s
 s
 s
 s | post restriction oocyte |
| Probe source: | GH10421-dg (Flybase link CG10033 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s | |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | enrichment_ubiquitous oocyte |
| stage8 |  s
 s | ubiquitous signal |
| stage9 |  s
 s
 s | oocyte post restriction |
| stage10 |  s
 s
 s
 s
 s
 s
 s
 s | oocyte post restriction |
| misc |  s | |
| Probe source: | LD21570-dg (Flybase link CG10033 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 | 
 | ubiquitous signal |
| stage2-7 | 
 | enrichment_ubiquitous oocyte |
| stage8 | 
 | |
| stage9 | 
 | nurse cells |
| stage10 | 
 | nurse cells |
| Probe source: | GH10421 (Flybase link CG10033 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | GM08338 (Flybase link CG10033 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for for in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | GH10421 (Flybase link CG10033 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Ubiquitous (Unlocalized) Strong expression (1-20ms exp) Expressed Stage 1-3 Maternal |
| stage4-5 | 
 | Blastoderm nuclei Pole cell exclusion Degraded partially stage 5 Stage 4-5 Degradation maternal transcripts Localized Pair-rule pattern Exclusionary patterns Apical exclusion Zygotic starting stage 5 Zygotic Subset blastoderm nuclei Expressed Degraded Embryonic localization patterns Terminal-gene pattern Segmented pattern Maternal |
| stage6-7 | 
 | Blastoderm nuclei Pair-rule pattern Degradation maternal transcripts Expressed Subset blastoderm nuclei Stage 6-7 Zygotic Segmented pattern Degraded Terminal-gene pattern Degraded completely stage 6 |
| stage8-9 | 
 | Segmented pattern Segment polarity pattern Terminal-gene pattern Subset blastoderm nuclei Expressed Stage 8-9 Zygotic Blastoderm nuclei |
| Probe source: | LD46758 (Flybase link CG10033 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Annotated by Hideki Stage 1-3 Expressed Ubiquitous (Unlocalized) Maternal |
| stage4-5 | 
 | Localized Apical exclusion Exclusionary patterns Expressed Pole cell exclusion Stage 4-5 Degraded Embryonic localization patterns Degraded partially stage 4 Maternal |
| stage6-7 | 
 | Blastoderm nuclei Pair-rule pattern Localized Zygotic starting stage 6 Exclusionary patterns Expression in API Expression in ectoderm Expressed Subset blastoderm nuclei Zygotic Pole cell exclusion Stage 6-7 Segmented pattern Embryonic localization patterns Maternal |
| stage8-9 | 
 | Zygotic Expressed Expression in ectoderm Expression in API Stage 8-9 Degraded Degraded partially stage 8 |
| Probe source: | LD21570 (Flybase link CG10033 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | GM08338 (Flybase link CG10033 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | Annotated by Christina Non-expressed No probe Stage 1-3 | |
| stage4-5 | Non-Expressed Stage 4-5 | |
| stage6-7 | Stage 6-7 Non-Expressed | |
| stage8-9 | Non-expressed Stage 8-9 | |
Annotation summary for for in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD21570-dg (Flybase link CG10033 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito maternal | |
| stage4-6 | subset pair rule foregut AISN dors ectoderm AISN vent ectoderm AISN post endoderm AISN ant endoderm AISN | |
| stage7-8 | foregut A dors ectoderm PR vent ectoderm PR ant endoderm A post endoderm PR | |
| stage9-10 | procephalic ectoderm PR visual PR foregut PR vent ectoderm PR trunk mesoderm PR ant endoderm PR post endoderm PR | |
| stage11-12 | cat_term:finito11-12 procephalon PR head epidermis dors PR P1 visual PR2 foregut PR clypeo-labral PR dors epidermis PR visceral muscle PR | |
| stage13-16 | head epidermis antennal sense organ foregut epipharynx hypopharynx tracheal sys hindgut visceral muscle | |
| Probe source: | GH10421 (Flybase link CG10033 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito maternal | |
| stage4-6 | pair rule subset foregut AISN dors ectoderm AISN vent ectoderm AISN post endoderm AISN ant endoderm AISN | |
| stage7-8 | foregut A dors ectoderm PR vent ectoderm PR ant endoderm A post endoderm PR | |
| stage9-10 | procephalic ectoderm PR visual PR foregut PR vent ectoderm PR trunk mesoderm PR post endoderm PR ant endoderm PR | |
| stage11-12 | cat_term:finito11-12 procephalon PR head epidermis dors PR P1 visual PR2 foregut PR clypeo-labral PR dors epidermis PR visceral muscle PR | |
| stage13-16 | head epidermis antennal sense organ foregut epipharynx hypopharynx tracheal sys hindgut visceral muscle | |
| Probe source: | LD46758-dg (Flybase link CG10033 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito maternal | |
| stage4-6 | pair rule list_4-6:specific subset foregut AISN dors ectoderm AISN vent ectoderm AISN post endoderm AISN ant endoderm AISN | |
| stage7-8 | list_7-8:specific foregut A dors ectoderm PR vent ectoderm PR ant endoderm A post endoderm PR | |
| stage9-10 | procephalic ectoderm PR visual PR foregut PR vent ectoderm PR trunk mesoderm PR ant endoderm PR post endoderm PR | |
| stage11-12 | cat_term:finito11-12 procephalon PR head epidermis dors PR P1 visual PR2 foregut PR clypeo-labral PR dors epidermis PR visceral muscle PR | |
| stage13-16 | head epidermis antennal sense organ foregut epipharynx hypopharynx tracheal sys hindgut visceral muscle | |
| Probe source: | GM08338 (Flybase link CG10033 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | LD21570 (Flybase link CG10033 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | LD46758 (Flybase link CG10033 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | GH10421-dg (Flybase link CG10033 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||