Annotation summary for for in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD46758-dg (Flybase link CG10033 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s
 s
 s | |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | oocyte enrichment_ubiquitous |
| stage8 |  s
 s
 s
 s
 s
 s
 s
 s | oocyte_ubiquitous oocyte |
| stage9 |  s
 s
 s
 s
 s
 s
 s
 s
 s | oocyte cytoplasmic foci |
| stage10 |  s
 s
 s
 s
 s
 s
 s
 s
 s | oocyte post restriction |
| Probe source: | GH10421-dg (Flybase link CG10033 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s | |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | enrichment_ubiquitous oocyte |
| stage8 |  s
 s | ubiquitous signal |
| stage9 |  s
 s
 s | post restriction oocyte |
| stage10 |  s
 s
 s
 s
 s
 s
 s
 s | oocyte post restriction |
| misc |  s | |
| Probe source: | LD21570-dg (Flybase link CG10033 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 | 
 | ubiquitous signal |
| stage2-7 | 
 | enrichment_ubiquitous oocyte |
| stage8 | 
 | |
| stage9 | 
 | nurse cells |
| stage10 | 
 | nurse cells |
| Probe source: | GH10421 (Flybase link CG10033 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | GM08338 (Flybase link CG10033 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
Annotation summary for for in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | GH10421 (Flybase link CG10033 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Stage 1-3 Ubiquitous (Unlocalized) Strong expression (1-20ms exp) Expressed Maternal |
| stage4-5 | 
 | Stage 4-5 Terminal-gene pattern Pole cell exclusion Zygotic Segmented pattern Degraded Expressed Degradation maternal transcripts Blastoderm nuclei Apical exclusion Degraded partially stage 5 Zygotic starting stage 5 Subset blastoderm nuclei Pair-rule pattern Localized Exclusionary patterns Embryonic localization patterns Maternal |
| stage6-7 | 
 | Blastoderm nuclei Degradation maternal transcripts Expressed Stage 6-7 Degraded completely stage 6 Degraded Zygotic Terminal-gene pattern Subset blastoderm nuclei Pair-rule pattern Segmented pattern |
| stage8-9 | 
 | Stage 8-9 Expressed Blastoderm nuclei Segmented pattern Terminal-gene pattern Subset blastoderm nuclei Zygotic Segment polarity pattern |
| Probe source: | LD46758 (Flybase link CG10033 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Annotated by Hideki Expressed Ubiquitous (Unlocalized) Stage 1-3 Maternal |
| stage4-5 | 
 | Embryonic localization patterns Expressed Degraded Exclusionary patterns Localized Pole cell exclusion Degraded partially stage 4 Apical exclusion Stage 4-5 Maternal |
| stage6-7 | 
 | Pole cell exclusion Subset blastoderm nuclei Zygotic Segmented pattern Pair-rule pattern Expression in ectoderm Expressed Blastoderm nuclei Stage 6-7 Embryonic localization patterns Localized Zygotic starting stage 6 Expression in API Exclusionary patterns Maternal |
| stage8-9 | 
 | Degraded partially stage 8 Expressed Expression in ectoderm Zygotic Degraded Expression in API Stage 8-9 |
| Probe source: | LD21570 (Flybase link CG10033 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | GM08338 (Flybase link CG10033 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | No probe Stage 1-3 Annotated by Christina Non-expressed | |
| stage4-5 | Stage 4-5 Non-Expressed | |
| stage6-7 | Non-Expressed Stage 6-7 | |
| stage8-9 | Non-expressed Stage 8-9 | |
Annotation summary for for in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) LD21570-dg (Flybase link CG10033 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito maternal | |
| stage4-6 | subset pair rule foregut AISN dors ectoderm AISN vent ectoderm AISN post endoderm AISN ant endoderm AISN | |
| stage7-8 | foregut A dors ectoderm PR vent ectoderm PR ant endoderm A post endoderm PR | |
| stage9-10 | procephalic ectoderm PR visual PR foregut PR vent ectoderm PR trunk mesoderm PR ant endoderm PR post endoderm PR | |
| stage11-12 | cat_term:finito11-12 procephalon PR head epidermis dors PR P1 visual PR2 foregut PR clypeo-labral PR dors epidermis PR visceral muscle PR | |
| stage13-16 | head epidermis antennal sense organ foregut epipharynx hypopharynx tracheal sys hindgut visceral muscle | |
| Probe source: | GH10421 (Flybase link CG10033 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito maternal | |
| stage4-6 | pair rule subset foregut AISN dors ectoderm AISN vent ectoderm AISN post endoderm AISN ant endoderm AISN | |
| stage7-8 | foregut A dors ectoderm PR vent ectoderm PR ant endoderm A post endoderm PR | |
| stage9-10 | procephalic ectoderm PR visual PR foregut PR vent ectoderm PR trunk mesoderm PR post endoderm PR ant endoderm PR | |
| stage11-12 | cat_term:finito11-12 procephalon PR head epidermis dors PR P1 visual PR2 foregut PR clypeo-labral PR dors epidermis PR visceral muscle PR | |
| stage13-16 | head epidermis antennal sense organ foregut epipharynx hypopharynx tracheal sys hindgut visceral muscle | |
| Probe source: | LD46758-dg (Flybase link CG10033 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito maternal | |
| stage4-6 | subset list_4-6:specific pair rule foregut AISN dors ectoderm AISN vent ectoderm AISN post endoderm AISN ant endoderm AISN | |
| stage7-8 | list_7-8:specific foregut A dors ectoderm PR vent ectoderm PR ant endoderm A post endoderm PR | |
| stage9-10 | procephalic ectoderm PR visual PR foregut PR vent ectoderm PR trunk mesoderm PR ant endoderm PR post endoderm PR | |
| stage11-12 | cat_term:finito11-12 procephalon PR head epidermis dors PR P1 visual PR2 foregut PR clypeo-labral PR dors epidermis PR visceral muscle PR | |
| stage13-16 | head epidermis antennal sense organ foregut epipharynx hypopharynx tracheal sys hindgut visceral muscle | |
| Probe source: | GM08338 (Flybase link CG10033 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | LD21570 (Flybase link CG10033 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | LD46758 (Flybase link CG10033 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | GH10421-dg (Flybase link CG10033 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||