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Legend: RNA signal: green, DNA staining: magenta
| Probe source: | RE68041 (Flybase link CG5661 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s
 s
 s
 s
 s | |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s
 s | follicle cells somatic cells |
| stage8 |  s
 s
 s | somatic cells follicle cells |
| stage9 |  s
 s
 s | follicle cells somatic cells |
| stage10 |  s
 s
 s
 s
 s
 s | squamous follicle cells somatic cells |
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| Probe source: | RE68041 (Flybase link CG5661 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Expressed Annotated by Hideki Medium expression (21-40ms exp) Stage 1-3 Ubiquitous (Unlocalized) Maternal |
| stage4-5 | 
 | Pole cell exclusion Subset blastoderm nuclei Localized Medium expression (21-40ms exp) Apical exclusion Exclusionary patterns Stage 4-5 Degraded Embryonic localization patterns Degraded completely stage 4 Expressed Degradation maternal transcripts Zygotic starting stage 4 Zygotic Blastoderm nuclei Segmented pattern Pair-rule pattern Maternal |
| stage6-7 | 
 | Blastoderm nuclei Strong expression (1-20ms exp) Pair-rule pattern Segmented pattern Basal enrichment Local terms for zyg transcripts Basal localization Expressed Zygotic Stage 6-7 Subset blastoderm nuclei |
| stage8-9 | 
 | Expressed Strong expression (1-20ms exp) Pair-rule pattern Zygotic Expression in ectoderm Segmented pattern Stage 8-9 |
| stage10- |  | Expressed Zygotic |
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| Probe source: | RE68041 (Flybase link CG5661 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | ||
| stage4-6 | AISN list_4-6:specific gap segmentally repeated dors ectoderm AISN vent ectoderm AISN post endoderm AISN amnioserosa AISN | |
| stage7-8 | list_7-8:specific procephalic ectoderm A head epidermis dors A dors ectoderm PR vent ectoderm PR ant endoderm A post endoderm PR amnioserosa A | |
| stage9-10 | procephalic ectoderm PR head epidermis dors PR dors ectoderm PR vent ectoderm PR inclusive hindgut PR ant endoderm PR post endoderm PR amnioserosa PR | |
| stage11-12 | head mesoderm PR head epidermis PR P1 foregut PR clypeo-labral PR dors epidermis PR vent epidermis PR salivary gland body PR hindgut proper PR trunk mesoderm PR garland cell PR ant midgut PR post midgut PR amnioserosa | |
| stage13-16 | cat_term:global_finito head epidermis foregut epipharynx hypopharynx dors apodeme dors epidermis atrium vent apodeme vent epidermis hindgut dors vessel midgut | |