DOT

Annotation summary for dm in insitu_ovaries_public

Legend: RNA signal: green, DNA staining: magenta

Probe source:	LD32539-dg (Flybase link CG10798 , FlyFish insitu , BDGP insitu new)
stage	images	Annotation
stage1	s s s	interesting pattern
stage2-7	s s s s s s s s s s s s s s s s s s	nuclear foci somatic cells nurse cells germline cells_ubiquitous nurse cells_nuclear foci follicle cells
stage8	s s s s	germline cells_ubiquitous nurse cells_nuclear foci follicle cells oocyte cytoplasmic foci nuclear foci nurse cells somatic cells
stage9	s s s s s s	cytoplasmic foci oocyte follicle cells nurse cells_nuclear foci nurse cells nuclear foci somatic cells
stage10	s s s s s s s	oocyte nucleus somatic cells post restriction follicle cells nurse cells_nuclear foci oocyte nurse cells nuclear foci
Probe source:	LD32539 (Flybase link CG10798 , FlyFish insitu , BDGP insitu new)
No images or annotation terms
Probe source:	GM04911 (Flybase link CG10798 , FlyFish insitu , BDGP insitu new)
No images or annotation terms
Probe source:	LD32539-tf (Flybase link CG10798 , FlyFish insitu , BDGP insitu new)
No images or annotation terms

Annotation summary for dm in insitu_fish

Legend: RNA signal: green, DNA staining: magenta

Probe source:	LD32539 (Flybase link CG10798 , FlyFish insitu , BDGP insitu new)
stage	images	Annotation
stage1-3		Annotated by Eric Microtubule-associated Localized Perinuclear localization Perinuclear around cortical nuclei Perinuclear around pole cell nuclei Nuclei associated localization Embryonic localization patterns Subcellular localization patterns Expressed Stage 1-3 Weak expression (>41ms exp) post localization Cell division apparatus Maternal Pole plasm
stage4-5		Pole cell localization Pole cell enrichment Degradation maternal transcripts Terminal-gene pattern Subset blastoderm nuclei post localization Zygotic Expressed Degraded Blastoderm nuclei Embryonic localization patterns Zygotic starting stage 5 Segmented pattern Stage 4-5 Degraded completely stage 5 Localized Degraded partially stage 4 Maternal
stage6-7		Subset blastoderm nuclei Blastoderm nuclei Segmented pattern Expressed Zygotic Terminal-gene pattern Stage 6-7
stage8-9		Expression in mesoderm Blastoderm nuclei Stage 8-9 Expression in API Segmented pattern Subset yolk nuclei Subset blastoderm nuclei Random yolk nuclei Expressed Zygotic Yolk nuclei
Probe source:	GM04911 (Flybase link CG10798 , FlyFish insitu , BDGP insitu new)
stage	images	Annotation
stage1-3		Annotated by Christina No probe
stage4-5
stage6-7
stage8-9

Annotation summary for dm in insitu

Legend: RNA signal: green, DNA staining: magenta

Probe source:	(best) LD32539-tf (Flybase link CG10798 , FlyFish insitu , BDGP insitu new)
stage	images	Annotation
stage1-3		flag_for_volker cat_term:global_finito (localised) maternal pole plasm
stage4-6		subset cellular blastoderm procephalic ectoderm AISN foregut AISN trunk mesoderm AISN head mesoderm AISN ant endoderm AISN endoderm AISN post endoderm AISN
stage7-8		foregut A trunk mesoderm PR head mesoderm PR post endoderm PR ant endoderm A
stage9-10		foregut PR salivary gland body SA trunk mesoderm PR head mesoderm PR post endoderm PR ant endoderm PR
stage11-12		proventriculus PR foregut PR tracheal PR salivary gland body PR anal pad SA hindgut proper PR trunk mesoderm PR dors pharyngeal muscle PR ant midgut PR post midgut PR
stage13-16		proventriculus salivary gland duct anal pad hindgut large intestine lymph gland muscle sys corpus cardiacum somatic muscle fat body dors prothoracic pharyngeal muscle midgut
Probe source:	LD32539-dg (Flybase link CG10798 , FlyFish insitu , BDGP insitu new)
stage	images	Annotation
stage1-3		cat_term:global_finito flag_for_volker maternal pole plasm
stage4-6		subset AISN list_4-6:specific cellular blastoderm procephalic ectoderm AISN foregut AISN trunk mesoderm AISN head mesoderm AISN post endoderm AISN endoderm AISN ant endoderm AISN
stage7-8		list_7-8:specific foregut A trunk mesoderm PR head mesoderm PR post endoderm PR ant endoderm A
stage9-10		foregut PR salivary gland body SA trunk mesoderm PR head mesoderm PR post endoderm PR ant endoderm PR
stage11-12		proventriculus PR foregut PR tracheal PR anal pad SA salivary gland body PR hindgut proper PR trunk mesoderm PR dors pharyngeal muscle PR ant midgut PR post midgut PR
stage13-16		proventriculus anal pad salivary gland duct large intestine hindgut somatic muscle corpus cardiacum fat body muscle sys lymph gland dors prothoracic pharyngeal muscle midgut
Probe source:	LD32539 (Flybase link CG10798 , FlyFish insitu , BDGP insitu new)
stage	images	Annotation
stage1-3		cat_term:global_finito flag_for_volker maternal pole plasm
stage4-6		subset cellular blastoderm procephalic ectoderm AISN foregut AISN trunk mesoderm AISN head mesoderm AISN ant endoderm AISN endoderm AISN post endoderm AISN
stage7-8		foregut A trunk mesoderm PR head mesoderm PR post endoderm PR ant endoderm A
stage9-10		foregut PR salivary gland body SA trunk mesoderm PR head mesoderm PR ant endoderm PR post endoderm PR
stage11-12		proventriculus PR foregut PR tracheal PR anal pad SA salivary gland body PR hindgut proper PR trunk mesoderm PR dors pharyngeal muscle PR ant midgut PR post midgut PR
stage13-16		proventriculus anal pad salivary gland duct large intestine hindgut fat body corpus cardiacum somatic muscle muscle sys lymph gland dors prothoracic pharyngeal muscle midgut
Probe source:	(Flybase link CG10798 , FlyFish insitu , BDGP insitu new)
stage	images	Annotation
stage1-3		cat_term:global_finito maternal pole plasm
stage4-6		list_4-6:specific subset cellular blastoderm procephalic ectoderm AISN foregut AISN trunk mesoderm AISN head mesoderm AISN endoderm AISN ant endoderm AISN post endoderm AISN
stage7-8		list_7-8:specific foregut A trunk mesoderm PR head mesoderm PR ant endoderm A post endoderm PR
stage9-10		foregut PR salivary gland body SA trunk mesoderm PR head mesoderm PR post endoderm PR ant endoderm PR
stage11-12		foregut PR proventriculus PR tracheal PR salivary gland body PR anal pad SA hindgut proper PR trunk mesoderm PR dors pharyngeal muscle PR post midgut PR ant midgut PR
stage13-16		proventriculus anal pad salivary gland duct large intestine hindgut fat body corpus cardiacum somatic muscle muscle sys lymph gland dors prothoracic pharyngeal muscle midgut
Probe source:	GM04911 (Flybase link CG10798 , FlyFish insitu , BDGP insitu new)
No images or annotation terms