Annotation summary for Sdc in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD08230-dg (Flybase link CG10497 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 | 
 | presumptive oocyte |
| stage2-7 | 
 | enrichment_ubiquitous oocyte |
| stage8 | 
 | somatic cells follicle cells ubiquitous signal cytoplasmic foci |
| stage9 |  | follicle cells cytoplasmic foci ubiquitous signal somatic cells |
| stage10 |  | ubiquitous signal |
| Probe source: | RE22862 (Flybase link CG10497 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s | |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s | oocyte enrichment_ubiquitous |
| stage8 |  s
 s
 s | ubiquitous signal |
| stage9 |  s
 s
 s | somatic cells apical restriction follicle cells ubiquitous signal |
| stage10 |  s
 s
 s
 s
 s | ubiquitous signal follicle cells apical restriction somatic cells |
Annotation summary for Sdc in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD08230 (Flybase link CG10497 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Expressed Weak expression (>41ms exp) Ubiquitous (Unlocalized) Annotated by Ronit Stage 1-3 Maternal |
| stage4-5 | 
 | Stage 4-5 Weak expression (>41ms exp) Expressed Ubiquitous (unlocalized) Maternal |
| stage6-7 | 
 | Intranuclear accumulation Basal enrichment Embryonic localization patterns Subset blastoderm nuclei Blastoderm nuclei Stage 6-7 Localized Weak expression (>41ms exp) Expressed Cytoplasmic foci Nuclei-associated localization Zygotic Membrane associated vent localization Accumlation nuclear subregion Expression in mesoderm Expression in API Subcellular localization patterns |
| stage8-9 | 
 | Zygotic Stage 8-9 Expressed Weak expression (>41ms exp) Ubiquitous (Unlocalized) |
| stage10- | 
 | Expressed post spiracles Specific hindgut area or cells Salivary glands Muscles Hindgut Subcellular localization patterns Stage 10- Tracheal lumen Tracheal sys dors vessel Ectoderm Blastoderm nuclei Localized vent nerve cord Amnioserosa |
| Probe source: | RE22862 (Flybase link CG10497 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Medium expression (21-40ms exp) Degradation maternal transcripts Ubiquitous (Unlocalized) Expressed Annotated by Ronit Degraded partially stage 3 Stage 1-3 Degraded Maternal |
| stage4-5 | 
 | Zygotic starting stage 5 All blastoderm nuclei Expressed Zygotic Cytoplasmic foci Medium expression (21-40ms exp) Pole cell exclusion Apical localization Blastoderm nuclei Diffuse apical localization Localized Subcellular localization patterns Exclusionary patterns Stage 4-5 |
| stage6-7 | 
 | Expressed Embryonic localization patterns Zygotic Subset blastoderm nuclei Pole cell exclusion Blastoderm nuclei Stage 6-7 Localized Random blastoderm nuclei Exclusionary patterns |
| stage8-9 | 
 | Ubiquitous (Unlocalized) Stage 8-9 Expressed |
| stage10- | 
 | Blastoderm nuclei Localized Subcellular localization patterns Stage 10- Expressed dors vessel Tracheal sys Salivary glands Amnioserosa |
Annotation summary for Sdc in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) CG10497-cm (Flybase link CG10497 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito maternal | |
| stage4-6 | apically cleared list_4-6:ubiquitous ubiquitous cellular blastoderm | |
| stage7-8 | list_7-8:ubiquitous ubiquitous procephalic ectoderm A vent ectoderm PR trunk mesoderm PR head mesoderm PR ant endoderm A post endoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR foregut PR vent ectoderm PR trunk mesoderm PR head mesoderm PR ant endoderm PR post endoderm PR | |
| stage11-12 | cat_term:finito11-12 brain PR stomatogastric nervous sys PR foregut PR dors epidermis PR tracheal PR vent epidermis PR vent nerve cord PR hindgut proper PR trunk mesoderm PR ant midgut PR post midgut PR | |
| stage13-16 | cat_term:any_neural brain stomatogastric nervous sys foregut tracheal sys dors epidermis dors apodeme vent nerve cord vent epidermis vent apodeme Malpighian tubule hindgut large intestine corpus allatum visceral muscle midgut | |
| Probe source: | LD08230-dg (Flybase link CG10497 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito maternal | |
| stage4-6 | ubiquitous apically cleared cellular blastoderm | |
| stage7-8 | ubiquitous procephalic ectoderm A vent ectoderm PR trunk mesoderm PR head mesoderm PR ant endoderm A post endoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR foregut PR vent ectoderm PR trunk mesoderm PR head mesoderm PR ant endoderm PR post endoderm PR | |
| stage11-12 | brain PR cat_term:finito11-12 foregut PR stomatogastric nervous sys PR dors epidermis PR tracheal PR vent epidermis PR vent nerve cord PR hindgut proper PR trunk mesoderm PR ant midgut PR post midgut PR | |
| stage13-16 | cat_term:any_neural brain stomatogastric nervous sys foregut dors epidermis dors apodeme tracheal sys vent apodeme vent nerve cord vent epidermis large intestine Malpighian tubule hindgut visceral muscle corpus allatum midgut | |
| Probe source: | LD08230 (Flybase link CG10497 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | RE22862 (Flybase link CG10497 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | no staining | |
| stage4-6 | no staining | |
| stage7-8 | no staining | |
| stage9-10 | no staining | |
| stage11-12 | no staining | |
| stage13-16 | no staining | |
| Probe source: | RE22862-dg (Flybase link CG10497 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||