Annotation summary for Sdc in insitu_ovaries_public
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD08230-dg (Flybase link CG10497 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 | 
 | presumptive oocyte |
| stage2-7 | 
 | enrichment_ubiquitous oocyte |
| stage8 | 
 | somatic cells follicle cells cytoplasmic foci ubiquitous signal |
| stage9 |  | follicle cells somatic cells cytoplasmic foci ubiquitous signal |
| stage10 |  | ubiquitous signal |
| Probe source: | RE22862 (Flybase link CG10497 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1 |  s
 s | |
| stage2-7 |  s
 s
 s
 s
 s
 s
 s
 s | oocyte enrichment_ubiquitous |
| stage8 |  s
 s
 s | ubiquitous signal |
| stage9 |  s
 s
 s | ubiquitous signal somatic cells apical restriction follicle cells |
| stage10 |  s
 s
 s
 s
 s | ubiquitous signal apical restriction somatic cells follicle cells |
Annotation summary for Sdc in insitu_fish
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | LD08230 (Flybase link CG10497 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Annotated by Ronit Weak expression (>41ms exp) Stage 1-3 Ubiquitous (Unlocalized) Expressed Maternal |
| stage4-5 | 
 | Expressed Stage 4-5 Ubiquitous (unlocalized) Weak expression (>41ms exp) Maternal |
| stage6-7 | 
 | Expression in API Blastoderm nuclei Embryonic localization patterns Subcellular localization patterns Cytoplasmic foci Localized Subset blastoderm nuclei vent localization Basal enrichment Stage 6-7 Membrane associated Intranuclear accumulation Expression in mesoderm Zygotic Weak expression (>41ms exp) Accumlation nuclear subregion Nuclei-associated localization Expressed |
| stage8-9 | 
 | Weak expression (>41ms exp) Stage 8-9 Ubiquitous (Unlocalized) Expressed Zygotic |
| stage10- | 
 | Tracheal lumen Ectoderm Stage 10- Expressed Specific hindgut area or cells post spiracles Salivary glands Muscles Tracheal sys dors vessel Blastoderm nuclei Subcellular localization patterns Hindgut Localized vent nerve cord Amnioserosa |
| Probe source: | RE22862 (Flybase link CG10497 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | 
 | Medium expression (21-40ms exp) Stage 1-3 Expressed Annotated by Ronit Degraded partially stage 3 Degradation maternal transcripts Ubiquitous (Unlocalized) Degraded Maternal |
| stage4-5 | 
 | Stage 4-5 Localized Cytoplasmic foci Subcellular localization patterns All blastoderm nuclei Pole cell exclusion Zygotic Blastoderm nuclei Zygotic starting stage 5 Expressed Medium expression (21-40ms exp) Exclusionary patterns Apical localization Diffuse apical localization |
| stage6-7 | 
 | Pole cell exclusion Localized Subset blastoderm nuclei Zygotic Embryonic localization patterns Blastoderm nuclei Expressed Stage 6-7 Exclusionary patterns Random blastoderm nuclei |
| stage8-9 | 
 | Expressed Ubiquitous (Unlocalized) Stage 8-9 |
| stage10- | 
 | Salivary glands Expressed Tracheal sys Stage 10- dors vessel Blastoderm nuclei Subcellular localization patterns Localized Amnioserosa |
Annotation summary for Sdc in insitu
Legend: RNA signal: green, DNA staining: magenta
| Probe source: | (best) CG10497-cm (Flybase link CG10497 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito maternal | |
| stage4-6 | ubiquitous list_4-6:ubiquitous apically cleared cellular blastoderm | |
| stage7-8 | list_7-8:ubiquitous ubiquitous procephalic ectoderm A vent ectoderm PR trunk mesoderm PR head mesoderm PR ant endoderm A post endoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR foregut PR vent ectoderm PR trunk mesoderm PR head mesoderm PR ant endoderm PR post endoderm PR | |
| stage11-12 | brain PR cat_term:finito11-12 foregut PR stomatogastric nervous sys PR tracheal PR dors epidermis PR vent nerve cord PR vent epidermis PR hindgut proper PR trunk mesoderm PR post midgut PR ant midgut PR | |
| stage13-16 | cat_term:any_neural brain foregut stomatogastric nervous sys dors apodeme dors epidermis tracheal sys vent epidermis vent nerve cord vent apodeme Malpighian tubule large intestine hindgut visceral muscle corpus allatum midgut | |
| Probe source: | LD08230-dg (Flybase link CG10497 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | cat_term:global_finito maternal | |
| stage4-6 | apically cleared ubiquitous cellular blastoderm | |
| stage7-8 | ubiquitous procephalic ectoderm A vent ectoderm PR trunk mesoderm PR head mesoderm PR ant endoderm A post endoderm PR | |
| stage9-10 | vent nerve cord PR P3 procephalic ectoderm PR foregut PR vent ectoderm PR trunk mesoderm PR head mesoderm PR ant endoderm PR post endoderm PR | |
| stage11-12 | brain PR cat_term:finito11-12 stomatogastric nervous sys PR foregut PR dors epidermis PR tracheal PR vent nerve cord PR vent epidermis PR hindgut proper PR trunk mesoderm PR post midgut PR ant midgut PR | |
| stage13-16 | cat_term:any_neural brain stomatogastric nervous sys foregut tracheal sys dors epidermis dors apodeme vent apodeme vent nerve cord vent epidermis hindgut large intestine Malpighian tubule corpus allatum visceral muscle midgut | |
| Probe source: | LD08230 (Flybase link CG10497 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||
| Probe source: | RE22862 (Flybase link CG10497 , FlyFish insitu , BDGP insitu new) | |
| stage | images | Annotation |
| stage1-3 | no staining | |
| stage4-6 | no staining | |
| stage7-8 | no staining | |
| stage9-10 | no staining | |
| stage11-12 | no staining | |
| stage13-16 | no staining | |
| Probe source: | RE22862-dg (Flybase link CG10497 , FlyFish insitu , BDGP insitu new) | |
| No images or annotation terms | ||