Annotation summary for Sdc in insitu_ovaries_public


Probe source: LD08230-dg (Flybase link CG10497 , FlyFish insitu , BDGP insitu new)
stageimagesAnnotation
stage1 presumptive oocyte
stage2-7 enrichment_ubiquitous
oocyte
stage8 follicle cells
cytoplasmic foci
somatic cells
ubiquitous signal
stage9ubiquitous signal
somatic cells
follicle cells
cytoplasmic foci
stage10ubiquitous signal


Probe source: RE22862 (Flybase link CG10497 , FlyFish insitu , BDGP insitu new)
stageimagesAnnotation
stage1s s
stage2-7s s s s s s s senrichment_ubiquitous
oocyte
stage8s s subiquitous signal
stage9s s ssomatic cells
ubiquitous signal
apical restriction
follicle cells
stage10s s s s sfollicle cells
apical restriction
somatic cells
ubiquitous signal


Annotation summary for <EM>Sdc</EM> in <i>insitu_fish</i>

Annotation summary for Sdc in insitu_fish


Probe source: LD08230 (Flybase link CG10497 , FlyFish insitu , BDGP insitu new)
stageimagesAnnotation
stage1-3 Ubiquitous (Unlocalized)
Weak expression (>41ms exp)
Expressed
Annotated by Ronit
Stage 1-3
Maternal
stage4-5 Stage 4-5
Ubiquitous (unlocalized)
Weak expression (>41ms exp)
Expressed
Maternal
stage6-7 Zygotic
Expression in mesoderm
Accumlation nuclear subregion
Subcellular localization patterns
Localized
Embryonic localization patterns
Blastoderm nuclei
Membrane associated
Weak expression (>41ms exp)
Nuclei-associated localization
Expressed
Basal enrichment
Cytoplasmic foci
vent localization
Stage 6-7
Intranuclear accumulation
Expression in API
Subset blastoderm nuclei
stage8-9 Expressed
Zygotic
Weak expression (>41ms exp)
Ubiquitous (Unlocalized)
Stage 8-9
stage10- dors vessel
Ectoderm
Expressed
Salivary glands
Tracheal lumen
Specific hindgut area or cells
Subcellular localization patterns
Hindgut
post spiracles
Stage 10-
Localized
Blastoderm nuclei
Tracheal sys
Muscles
vent nerve cord
Amnioserosa


Probe source: RE22862 (Flybase link CG10497 , FlyFish insitu , BDGP insitu new)
stageimagesAnnotation
stage1-3 Degradation maternal transcripts
Annotated by Ronit
Medium expression (21-40ms exp)
Stage 1-3
Degraded
Expressed
Ubiquitous (Unlocalized)
Degraded partially stage 3
Maternal
stage4-5 Zygotic
Expressed
Apical localization
Subcellular localization patterns
Pole cell exclusion
Cytoplasmic foci
Medium expression (21-40ms exp)
Stage 4-5
Localized
Zygotic starting stage 5
Blastoderm nuclei
All blastoderm nuclei
Exclusionary patterns
Diffuse apical localization
stage6-7 Localized
Embryonic localization patterns
Random blastoderm nuclei
Pole cell exclusion
Expressed
Zygotic
Subset blastoderm nuclei
Exclusionary patterns
Stage 6-7
Blastoderm nuclei
stage8-9 Stage 8-9
Ubiquitous (Unlocalized)
Expressed
stage10- Subcellular localization patterns
Salivary glands
Stage 10-
Localized
dors vessel
Expressed
Tracheal sys
Blastoderm nuclei
Amnioserosa


Annotation summary for <EM>Sdc</EM> in <i>insitu</i>

Annotation summary for Sdc in insitu


Probe source: (best) CG10497-cm (Flybase link CG10497 , FlyFish insitu , BDGP insitu new)
stageimagesAnnotation
stage1-3cat_term:global_finito
maternal
stage4-6ubiquitous
list_4-6:ubiquitous
apically cleared
cellular blastoderm
stage7-8 ubiquitous
list_7-8:ubiquitous
procephalic ectoderm A
vent ectoderm PR
trunk mesoderm PR
head mesoderm PR
ant endoderm A
post endoderm PR
stage9-10 vent nerve cord PR P3
procephalic ectoderm PR
foregut PR
vent ectoderm PR
trunk mesoderm PR
head mesoderm PR
ant endoderm PR
post endoderm PR
stage11-12 brain PR
cat_term:finito11-12
stomatogastric nervous sys PR
foregut PR
tracheal PR
dors epidermis PR
vent nerve cord PR
vent epidermis PR
hindgut proper PR
trunk mesoderm PR
ant midgut PR
post midgut PR
stage13-16 cat_term:any_neural
brain
stomatogastric nervous sys
foregut
dors epidermis
tracheal sys
dors apodeme
vent nerve cord
vent epidermis
vent apodeme
large intestine
Malpighian tubule
hindgut
visceral muscle
corpus allatum
midgut


Probe source: LD08230-dg (Flybase link CG10497 , FlyFish insitu , BDGP insitu new)
stageimagesAnnotation
stage1-3cat_term:global_finito
maternal
stage4-6apically cleared
ubiquitous
cellular blastoderm
stage7-8 ubiquitous
procephalic ectoderm A
vent ectoderm PR
trunk mesoderm PR
head mesoderm PR
post endoderm PR
ant endoderm A
stage9-10 vent nerve cord PR P3
procephalic ectoderm PR
foregut PR
vent ectoderm PR
trunk mesoderm PR
head mesoderm PR
ant endoderm PR
post endoderm PR
stage11-12 brain PR
cat_term:finito11-12
stomatogastric nervous sys PR
foregut PR
dors epidermis PR
tracheal PR
vent epidermis PR
vent nerve cord PR
hindgut proper PR
trunk mesoderm PR
ant midgut PR
post midgut PR
stage13-16 cat_term:any_neural
brain
stomatogastric nervous sys
foregut
dors epidermis
dors apodeme
tracheal sys
vent nerve cord
vent apodeme
vent epidermis
large intestine
hindgut
Malpighian tubule
corpus allatum
visceral muscle
midgut


Probe source: LD08230 (Flybase link CG10497 , FlyFish insitu , BDGP insitu new)
No images or annotation terms


Probe source: RE22862 (Flybase link CG10497 , FlyFish insitu , BDGP insitu new)
stageimagesAnnotation
stage1-3no staining
stage4-6no staining
stage7-8no staining
stage9-10no staining
stage11-12no staining
stage13-16no staining


Probe source: RE22862-dg (Flybase link CG10497 , FlyFish insitu , BDGP insitu new)
No images or annotation terms


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